RNA–Protein interactions for RNA: ENST00000562543.5

TCF4-213, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-213ENST00000562543 LOC110117498A0A087WWA1 95 aa3.21□□□□□ -1.9
TCF4-213ENST00000562543 IGHV3-16A0A0C4DH30 117 aa3.21□□□□□ -1.9
TCF4-213ENST00000562543 F8WEM9 126 aa3.21□□□□□ -1.9
TCF4-213ENST00000562543 MT2AP02795 61 aa3.21□□□□□ -1.9
TCF4-213ENST00000562543 KRTAP26-1Q6PEX3 210 aa3.21□□□□□ -1.9
TCF4-213ENST00000562543 COX6B2Q6YFQ2 88 aa3.21□□□□□ -1.9
TCF4-213ENST00000562543 FAM19A1Q7Z5A9 133 aa3.21□□□□□ -1.9
TCF4-213ENST00000562543 ZNF625Q96I27 306 aaPredicted RBP3.21□□□□□ -1.9
TCF4-213ENST00000562543 OPRPNQ99935 248 aaPredicted RBP3.21□□□□□ -1.9
TCF4-213ENST00000562543 A0A087X002 238 aa3.2□□□□□ -1.9
TCF4-213ENST00000562543 FAM218AQ96MZ4 157 aa3.2□□□□□ -1.9
TCF4-213ENST00000562543 CHCHD7Q9BUK0 85 aa3.2□□□□□ -1.9
TCF4-213ENST00000562543 TRBV7-4A0A0J9YYF1 115 aa3.19□□□□□ -1.9
TCF4-213ENST00000562543 SMIM1B2RUZ4 78 aa3.19□□□□□ -1.9
TCF4-213ENST00000562543 GNRH2O43555 120 aa3.19□□□□□ -1.9
TCF4-213ENST00000562543 MT1FP04733 61 aa3.19□□□□□ -1.9
TCF4-213ENST00000562543 FAM74A4Q5TZK3 123 aa3.19□□□□□ -1.9
TCF4-213ENST00000562543 SOSTDC1Q6X4U4 206 aa3.19□□□□□ -1.9
TCF4-213ENST00000562543 MRPL55Q7Z7F7 128 aaKnown RBP3.19□□□□□ -1.9
TCF4-213ENST00000562543 MIR7-3HGQ8N6C7 128 aa3.19□□□□□ -1.9
TCF4-213ENST00000562543 SND1-IT1Q9HBX3 110 aa3.19□□□□□ -1.9
TCF4-213ENST00000562543 LINC00474Q9P2X8 69 aa3.19□□□□□ -1.9
TCF4-213ENST00000562543 A0A0U1RRA0 63 aa3.18□□□□□ -1.9
TCF4-213ENST00000562543 Q1T7F1 81 aa3.18□□□□□ -1.9
TCF4-213ENST00000562543 TYMSOSQ8TAI1 123 aa3.18□□□□□ -1.9
TCF4-213ENST00000562543 SMIM11BQ8TCY0 68 aa3.18□□□□□ -1.9
TCF4-213ENST00000562543 FAM104AQ969W3 186 aa3.18□□□□□ -1.9
TCF4-213ENST00000562543 CDKN2A-AS1Q9UH64 79 aa3.18□□□□□ -1.9
TCF4-213ENST00000562543 AHNAK2Q8IVF2 5795 aa3.17□□□□□ -1.9
TCF4-213ENST00000562543 IGLV8-61A0A075B6I0 122 aa3.17□□□□□ -1.9
TCF4-213ENST00000562543 IGKV2-29A2NJV5 120 aaPredicted RBP3.17□□□□□ -1.9
TCF4-213ENST00000562543 TMEM254Q8TBM7 123 aa3.17□□□□□ -1.9
TCF4-213ENST00000562543 IGKV2-28A0A075B6P5 120 aa3.16□□□□□ -1.9
TCF4-213ENST00000562543 A0A087WZ39 114 aa3.16□□□□□ -1.9
TCF4-213ENST00000562543 TRBV10-1A0A0K0K1A3 114 aa3.16□□□□□ -1.9
TCF4-213ENST00000562543 TRBV6-4A0A1B0GX49 114 aa3.16□□□□□ -1.9
TCF4-213ENST00000562543 NCR3O14931 201 aa3.16□□□□□ -1.9
TCF4-213ENST00000562543 NDUFS5O43920 106 aa3.16□□□□□ -1.9
TCF4-213ENST00000562543 IGKV2D-28P01615 120 aa3.16□□□□□ -1.9
TCF4-213ENST00000562543 UBE2BP63146 152 aa3.16□□□□□ -1.9
TCF4-213ENST00000562543 NREPQ16612 68 aa3.16□□□□□ -1.9
TCF4-213ENST00000562543 LINC00242Q5T6M2 205 aa3.16□□□□□ -1.9
TCF4-213ENST00000562543 Q6ZQT0 140 aa3.16□□□□□ -1.9
TCF4-213ENST00000562543 LCE3EQ5T5B0 92 aa3.15□□□□□ -1.91
TCF4-213ENST00000562543 LINC00304Q8N9R0 145 aa3.15□□□□□ -1.91
TCF4-213ENST00000562543 COX7B2Q8TF08 81 aa3.15□□□□□ -1.91
TCF4-213ENST00000562543 A0A1B0GW54 56 aa3.14□□□□□ -1.91
TCF4-213ENST00000562543 LCE3AQ5TA76 89 aa3.14□□□□□ -1.91
TCF4-213ENST00000562543 Q6ZVQ6 151 aa3.14□□□□□ -1.91
TCF4-213ENST00000562543 KTN1-AS1Q86SY8 53 aa3.14□□□□□ -1.91
TCF4-213ENST00000562543 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.13□□□□□ -1.91
TCF4-213ENST00000562543 A0A1W2PNN7 141 aa3.13□□□□□ -1.91
TCF4-213ENST00000562543 hDV103S1A0JD37 113 aa3.13□□□□□ -1.91
TCF4-213ENST00000562543 NDUFB1O75438 58 aa3.13□□□□□ -1.91
TCF4-213ENST00000562543 LINC00158P58513 81 aa3.13□□□□□ -1.91
TCF4-213ENST00000562543 PCOTHQ58A44 107 aa3.13□□□□□ -1.91
TCF4-213ENST00000562543 C9orf129Q5T035 196 aaKnown RBP3.13□□□□□ -1.91
TCF4-213ENST00000562543 CYP4F30PQ9H0H9 118 aa3.13□□□□□ -1.91
TCF4-213ENST00000562543 PRR34Q9NV39 138 aa3.13□□□□□ -1.91
TCF4-213ENST00000562543 SNURFQ9Y675 71 aa3.13□□□□□ -1.91
TCF4-213ENST00000562543 BPY2O14599 106 aa3.12□□□□□ -1.91
TCF4-213ENST00000562543 VPREB1P12018 145 aa3.12□□□□□ -1.91
TCF4-213ENST00000562543 SPRR2EP22531 72 aa3.12□□□□□ -1.91
TCF4-213ENST00000562543 SPRR2BP35325 72 aa3.12□□□□□ -1.91
TCF4-213ENST00000562543 SPRR2AP35326 72 aa3.12□□□□□ -1.91
TCF4-213ENST00000562543 UBE2AP49459 152 aa3.12□□□□□ -1.91
TCF4-213ENST00000562543 COX17Q14061 63 aa3.12□□□□□ -1.91
TCF4-213ENST00000562543 KRTAP13-2Q52LG2 175 aa3.12□□□□□ -1.91
TCF4-213ENST00000562543 NTM-AS1Q6ZSK4 140 aa3.12□□□□□ -1.91
TCF4-213ENST00000562543 KRTAP5-2Q701N4 177 aa3.12□□□□□ -1.91
TCF4-213ENST00000562543 CDC42SE2Q9NRR3 84 aa3.12□□□□□ -1.91
TCF4-213ENST00000562543 UBE2L6O14933 153 aa3.11□□□□□ -1.91
TCF4-213ENST00000562543 ELOF1P60002 83 aaKnown RBP3.11□□□□□ -1.91
TCF4-213ENST00000562543 RNASE13Q5GAN3 156 aaKnown RBP3.11□□□□□ -1.91
TCF4-213ENST00000562543 PHF5AQ7RTV0 110 aaKnown RBP3.11□□□□□ -1.91
TCF4-213ENST00000562543 KRTAP11-1Q8IUC1 163 aa3.11□□□□□ -1.91
TCF4-213ENST00000562543 C15orf56Q8N910 161 aa3.11□□□□□ -1.91
TCF4-213ENST00000562543 OCR1Q9BZK8 76 aa3.11□□□□□ -1.91
TCF4-213ENST00000562543 ANGP03950 147 aaKnown RBP3.1□□□□□ -1.91
TCF4-213ENST00000562543 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.1□□□□□ -1.91
TCF4-213ENST00000562543 LINC00575Q6W349 94 aa3.1□□□□□ -1.91
TCF4-213ENST00000562543 COX7BP24311 80 aa3.09□□□□□ -1.91
TCF4-213ENST00000562543 FAM229BQ4G0N7 80 aa3.09□□□□□ -1.91
TCF4-213ENST00000562543 CLPSL2Q6UWE3 100 aa3.09□□□□□ -1.91
TCF4-213ENST00000562543 ATP11AUNQ6ZP68 121 aa3.09□□□□□ -1.91
TCF4-213ENST00000562543 Q8IZM0 81 aa3.09□□□□□ -1.91
TCF4-213ENST00000562543 LIMD2Q9BT23 127 aa3.09□□□□□ -1.91
TCF4-213ENST00000562543 TRBV6-8A0A0A6YYG3 113 aa3.08□□□□□ -1.92
TCF4-213ENST00000562543 IGHV3-73A0A0B4J1V6 119 aa3.08□□□□□ -1.92
TCF4-213ENST00000562543 KRTAP10-10P60014 251 aa3.08□□□□□ -1.92
TCF4-213ENST00000562543 KRTAP5-10Q6L8G5 202 aa3.08□□□□□ -1.92
TCF4-213ENST00000562543 CD164L2Q6UWJ8 174 aa3.08□□□□□ -1.92
TCF4-213ENST00000562543 HMCN1Q96RW7 5635 aa3.08□□□□□ -1.92
TCF4-213ENST00000562543 IGHV3OR16-9A0A0B4J2B5 98 aa3.07□□□□□ -1.92
TCF4-213ENST00000562543 H3BPC8 53 aa3.07□□□□□ -1.92
TCF4-213ENST00000562543 C9orf116Q5BN46 136 aaPredicted RBP3.07□□□□□ -1.92
TCF4-213ENST00000562543 KRTAP5-7Q6L8G8 165 aa3.07□□□□□ -1.92
TCF4-213ENST00000562543 TRAV22A0A0B4J277 110 aa3.06□□□□□ -1.92
TCF4-213ENST00000562543 IGKV4-1P06312 121 aa3.06□□□□□ -1.92
TCF4-213ENST00000562543 DSTQ03001 7570 aaKnown RBP3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 168.8 ms