RNA–Protein interactions for RNA: ENST00000562075.6

CNN2-204, Transcript of calponin 2, humanhuman

TSL 1 (best)

Gene CNN2, Length 623 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2-204ENST00000562075 HCG22E2RYF7 251 aa8.1□□□□□ -1.11
CNN2-204ENST00000562075 MT1HL1P0DM35 61 aa8.1□□□□□ -1.11
CNN2-204ENST00000562075 LRP1Q07954 4544 aaKnown RBP8.1□□□□□ -1.11
CNN2-204ENST00000562075 WFDC13Q8IUB5 93 aa8.07□□□□□ -1.12
CNN2-204ENST00000562075 C8orf17Q9NRJ1 99 aa8.07□□□□□ -1.12
CNN2-204ENST00000562075 MMP24-AS1A0A0U1RRL7 71 aa8.06□□□□□ -1.12
CNN2-204ENST00000562075 ATOX1O00244 68 aa8.06□□□□□ -1.12
CNN2-204ENST00000562075 TNXBP22105 4242 aa8.06□□□□□ -1.12
CNN2-204ENST00000562075 KRTAP29-1A8MX34 341 aaPredicted RBP8.05□□□□□ -1.12
CNN2-204ENST00000562075 CASC2Q6XLA1 102 aa8.05□□□□□ -1.12
CNN2-204ENST00000562075 C8orf87E5RJ46 101 aa8.04□□□□□ -1.12
CNN2-204ENST00000562075 RETNLBQ9BQ08 111 aa8.04□□□□□ -1.12
CNN2-204ENST00000562075 ANAPC13Q9BS18 74 aa8.04□□□□□ -1.12
CNN2-204ENST00000562075 ABCA13Q86UQ4 5058 aa8.02□□□□□ -1.13
CNN2-204ENST00000562075 hDV103S1A0JD37 113 aa8.02□□□□□ -1.13
CNN2-204ENST00000562075 LINC00313P59037 77 aa8.01□□□□□ -1.13
CNN2-204ENST00000562075 NOTCH2NLQ7Z3S9 236 aa8.01□□□□□ -1.13
CNN2-204ENST00000562075 MYCBP2O75592 4640 aa8□□□□□ -1.13
CNN2-204ENST00000562075 SMIM20Q8N5G0 67 aa7.99□□□□□ -1.13
CNN2-204ENST00000562075 TMEM254Q8TBM7 123 aa7.98□□□□□ -1.13
CNN2-204ENST00000562075 PCP4P48539 62 aa7.97□□□□□ -1.13
CNN2-204ENST00000562075 J3QL48 77 aa7.96□□□□□ -1.14
CNN2-204ENST00000562075 MRPL34Q9BQ48 92 aaKnown RBP7.96□□□□□ -1.14
CNN2-204ENST00000562075 TRAV7A0A075B6U4 112 aa7.95□□□□□ -1.14
CNN2-204ENST00000562075 FP248Q71RG6 208 aaPredicted RBP7.95□□□□□ -1.14
CNN2-204ENST00000562075 SERP2Q8N6R1 65 aa7.95□□□□□ -1.14
CNN2-204ENST00000562075 OCR1Q9BZK8 76 aa7.94□□□□□ -1.14
CNN2-204ENST00000562075 DMBT1Q9UGM3 2413 aaPredicted RBP7.92□□□□□ -1.14
CNN2-204ENST00000562075 NDUFS5O43920 106 aa7.92□□□□□ -1.14
CNN2-204ENST00000562075 KRTAP16-1A8MUX0 517 aa7.91□□□□□ -1.14
CNN2-204ENST00000562075 C9orf92A6NGG3 77 aa7.9□□□□□ -1.14
CNN2-204ENST00000562075 COX7CP15954 63 aa7.9□□□□□ -1.14
CNN2-204ENST00000562075 IGLV7-46A0A075B6I9 117 aa7.89□□□□□ -1.15
CNN2-204ENST00000562075 UQCRQO14949 82 aa7.88□□□□□ -1.15
CNN2-204ENST00000562075 TP53AIP1Q9HCN2 124 aa7.88□□□□□ -1.15
CNN2-204ENST00000562075 PRR4Q16378 134 aa7.87□□□□□ -1.15
CNN2-204ENST00000562075 Q8N9P0 234 aaPredicted RBP7.86□□□□□ -1.15
CNN2-204ENST00000562075 PCLOQ9Y6V0 5065 aa7.85□□□□□ -1.15
CNN2-204ENST00000562075 CCDC179H3BU77 68 aa7.84□□□□□ -1.15
CNN2-204ENST00000562075 C5orf47Q569G3 176 aa7.82□□□□□ -1.16
CNN2-204ENST00000562075 H0Y9P7 68 aa7.81□□□□□ -1.16
CNN2-204ENST00000562075 TRAV22A0A0B4J277 110 aa7.8□□□□□ -1.16
CNN2-204ENST00000562075 MP68P56378 58 aa7.8□□□□□ -1.16
CNN2-204ENST00000562075 KRTAP13-3Q3SY46 172 aa7.8□□□□□ -1.16
CNN2-204ENST00000562075 C20orf197Q8N268 126 aa7.8□□□□□ -1.16
CNN2-204ENST00000562075 A8MUU9 505 aa7.78□□□□□ -1.16
CNN2-204ENST00000562075 C20orf166-AS1Q96NR2 134 aa7.78□□□□□ -1.16
CNN2-204ENST00000562075 A0A0U1RQV1 116 aa7.75□□□□□ -1.17
CNN2-204ENST00000562075 Q5W150 140 aa7.75□□□□□ -1.17
CNN2-204ENST00000562075 SNURFQ9Y675 71 aa7.75□□□□□ -1.17
CNN2-204ENST00000562075 H3BPC8 53 aa7.74□□□□□ -1.17
CNN2-204ENST00000562075 TPRXLQ17RH7 258 aa7.74□□□□□ -1.17
CNN2-204ENST00000562075 LINC00208Q96KT6 92 aa7.74□□□□□ -1.17
CNN2-204ENST00000562075 KLKP1Q107X0 134 aa7.73□□□□□ -1.17
CNN2-204ENST00000562075 XP32Q5T750 250 aa7.73□□□□□ -1.17
CNN2-204ENST00000562075 Q75L30 129 aa7.73□□□□□ -1.17
CNN2-204ENST00000562075 ZCCHC13Q8WW36 166 aaKnown RBP7.72□□□□□ -1.17
CNN2-204ENST00000562075 C1orf64Q8NEQ6 169 aa7.71□□□□□ -1.18
CNN2-204ENST00000562075 CYSTM1Q9H1C7 97 aa7.69□□□□□ -1.18
CNN2-204ENST00000562075 LOC101927531A0A1B0GV80 90 aa7.68□□□□□ -1.18
CNN2-204ENST00000562075 RPL37P61927 97 aaKnown RBP7.68□□□□□ -1.18
CNN2-204ENST00000562075 NDUFC1O43677 76 aa7.65□□□□□ -1.18
CNN2-204ENST00000562075 ATP11AUNQ6ZP68 121 aa7.65□□□□□ -1.18
CNN2-204ENST00000562075 IGKV2-30P06310 120 aa7.63□□□□□ -1.19
CNN2-204ENST00000562075 IGKV2D-30A0A075B6S6 120 aa7.62□□□□□ -1.19
CNN2-204ENST00000562075 H7BZZ5 65 aa7.62□□□□□ -1.19
CNN2-204ENST00000562075 PCOTHQ58A44 107 aa7.6□□□□□ -1.19
CNN2-204ENST00000562075 CYP4F30PQ9H0H9 118 aa7.6□□□□□ -1.19
CNN2-204ENST00000562075 HERC1Q15751 4861 aa7.59□□□□□ -1.19
CNN2-204ENST00000562075 C7orf65Q6ZTY9 151 aa7.58□□□□□ -1.2
CNN2-204ENST00000562075 TMEM258P61165 79 aa7.56□□□□□ -1.2
CNN2-204ENST00000562075 SPINK7P58062 85 aa7.52□□□□□ -1.21
CNN2-204ENST00000562075 LPAP08519 4548 aa7.51□□□□□ -1.21
CNN2-204ENST00000562075 FAM236DA0A1B0GTK5 79 aa7.51□□□□□ -1.21
CNN2-204ENST00000562075 FAM236CP0DP71 79 aa7.51□□□□□ -1.21
CNN2-204ENST00000562075 SEC61BP60468 96 aaKnown RBP7.5□□□□□ -1.21
CNN2-204ENST00000562075 HRES1P13985 223 aa7.49□□□□□ -1.21
CNN2-204ENST00000562075 ATP5EP56381 51 aaPredicted RBP7.49□□□□□ -1.21
CNN2-204ENST00000562075 SPANXA2-OT1Q8N9U9 137 aa7.49□□□□□ -1.21
CNN2-204ENST00000562075 HMCN2Q8NDA2 5059 aa7.48□□□□□ -1.21
CNN2-204ENST00000562075 LRP2P98164 4655 aa7.46□□□□□ -1.21
CNN2-204ENST00000562075 C4orf26Q17RF5 130 aa7.4□□□□□ -1.22
CNN2-204ENST00000562075 DMAC1Q96GE9 116 aa7.36□□□□□ -1.23
CNN2-204ENST00000562075 MUC17Q685J3 4493 aa7.35□□□□□ -1.23
CNN2-204ENST00000562075 SERP1Q9Y6X1 66 aa7.34□□□□□ -1.23
CNN2-204ENST00000562075 ACYP2P14621 99 aa7.32□□□□□ -1.24
CNN2-204ENST00000562075 COX6B2Q6YFQ2 88 aa7.32□□□□□ -1.24
CNN2-204ENST00000562075 A8MUN3 132 aa7.31□□□□□ -1.24
CNN2-204ENST00000562075 KRTAP4-1Q9BYQ7 146 aa7.3□□□□□ -1.24
CNN2-204ENST00000562075 COA5Q86WW8 74 aa7.29□□□□□ -1.24
CNN2-204ENST00000562075 RBM12B-AS1Q9P1G2 102 aa7.28□□□□□ -1.24
CNN2-204ENST00000562075 KRTAP3-1Q9BYR8 98 aa7.27□□□□□ -1.25
CNN2-204ENST00000562075 MPLKIPQ8TAP9 179 aa7.26□□□□□ -1.25
CNN2-204ENST00000562075 RPS28P62857 69 aaKnown RBP7.25□□□□□ -1.25
CNN2-204ENST00000562075 CHKB-CPT1BH3BT56 60 aa7.23□□□□□ -1.25
CNN2-204ENST00000562075 H1FX-AS1Q4G0G2 97 aa7.18□□□□□ -1.26
CNN2-204ENST00000562075 UBR4Q5T4S7 5183 aa7.13□□□□□ -1.27
CNN2-204ENST00000562075 SMIM26A0A096LP01 95 aa7.12□□□□□ -1.27
CNN2-204ENST00000562075 S4R3F8 94 aa7.12□□□□□ -1.27
CNN2-204ENST00000562075 SPTSSBQ8NFR3 76 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms