RNA–Protein interactions for RNA: ENST00000561840.1

TRAPPC2L-202, Transcript of trafficking protein particle complex 2 like, humanhuman

TSL 5 BASIC

Gene TRAPPC2L, Length 558 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2L-202ENST00000561840 RBM12B-AS1Q9P1G2 102 aa5.97□□□□□ -1.45
TRAPPC2L-202ENST00000561840 A0A1B0GVX0 72 aa5.96□□□□□ -1.46
TRAPPC2L-202ENST00000561840 ATXN8Q156A1 80 aa5.96□□□□□ -1.46
TRAPPC2L-202ENST00000561840 NDUFB1O75438 58 aa5.95□□□□□ -1.46
TRAPPC2L-202ENST00000561840 JMJD7-PLA2G4BH0Y9G9 81 aa5.94□□□□□ -1.46
TRAPPC2L-202ENST00000561840 Q6ZQT0 140 aa5.93□□□□□ -1.46
TRAPPC2L-202ENST00000561840 A0A1B0GW54 56 aa5.91□□□□□ -1.46
TRAPPC2L-202ENST00000561840 PDE6GP18545 87 aa5.91□□□□□ -1.46
TRAPPC2L-202ENST00000561840 MTURNQ8N3F0 131 aa5.91□□□□□ -1.46
TRAPPC2L-202ENST00000561840 NAA38Q9BRA0 125 aaKnown RBP5.91□□□□□ -1.46
TRAPPC2L-202ENST00000561840 LYRM7Q5U5X0 104 aa5.9□□□□□ -1.46
TRAPPC2L-202ENST00000561840 SMIM6P0DI80 62 aa5.89□□□□□ -1.47
TRAPPC2L-202ENST00000561840 ZCCHC13Q8WW36 166 aaKnown RBP5.89□□□□□ -1.47
TRAPPC2L-202ENST00000561840 LOC110117498A0A087WWA1 95 aa5.88□□□□□ -1.47
TRAPPC2L-202ENST00000561840 HRES1P13985 223 aa5.88□□□□□ -1.47
TRAPPC2L-202ENST00000561840 A8MWP4 228 aa5.86□□□□□ -1.47
TRAPPC2L-202ENST00000561840 KRTAP9-8Q9BYQ0 159 aa5.86□□□□□ -1.47
TRAPPC2L-202ENST00000561840 SPINK7P58062 85 aa5.85□□□□□ -1.47
TRAPPC2L-202ENST00000561840 NREPQ16612 68 aa5.85□□□□□ -1.47
TRAPPC2L-202ENST00000561840 MPLKIPQ8TAP9 179 aa5.85□□□□□ -1.47
TRAPPC2L-202ENST00000561840 C14orf132Q9NPU4 83 aa5.85□□□□□ -1.47
TRAPPC2L-202ENST00000561840 C8orf17Q9NRJ1 99 aa5.85□□□□□ -1.47
TRAPPC2L-202ENST00000561840 TSTD3H0UI37 97 aa5.84□□□□□ -1.47
TRAPPC2L-202ENST00000561840 BATFQ16520 125 aa5.84□□□□□ -1.47
TRAPPC2L-202ENST00000561840 Q8N9P0 234 aaPredicted RBP5.84□□□□□ -1.47
TRAPPC2L-202ENST00000561840 IGKV3D-7A0A0C4DH55 119 aa5.82□□□□□ -1.48
TRAPPC2L-202ENST00000561840 Q6ZVQ6 151 aa5.81□□□□□ -1.48
TRAPPC2L-202ENST00000561840 PRR15Q8IV56 129 aa5.8□□□□□ -1.48
TRAPPC2L-202ENST00000561840 KRTAP10-10P60014 251 aa5.79□□□□□ -1.48
TRAPPC2L-202ENST00000561840 C9orf118A6NHY6 69 aa5.77□□□□□ -1.49
TRAPPC2L-202ENST00000561840 MT2AP02795 61 aa5.77□□□□□ -1.49
TRAPPC2L-202ENST00000561840 H3BT86 120 aa5.76□□□□□ -1.49
TRAPPC2L-202ENST00000561840 TMEM254Q8TBM7 123 aa5.76□□□□□ -1.49
TRAPPC2L-202ENST00000561840 MRPL34Q9BQ48 92 aaKnown RBP5.76□□□□□ -1.49
TRAPPC2L-202ENST00000561840 NDUFS5O43920 106 aa5.75□□□□□ -1.49
TRAPPC2L-202ENST00000561840 WFDC13Q8IUB5 93 aa5.75□□□□□ -1.49
TRAPPC2L-202ENST00000561840 hDV103S1A0JD37 113 aa5.74□□□□□ -1.49
TRAPPC2L-202ENST00000561840 A0A1W2PPM0 123 aa5.73□□□□□ -1.49
TRAPPC2L-202ENST00000561840 BPY2O14599 106 aa5.73□□□□□ -1.49
TRAPPC2L-202ENST00000561840 MMP24-AS1A0A0U1RRL7 71 aa5.72□□□□□ -1.49
TRAPPC2L-202ENST00000561840 LOC105371267A0A1B0GV96 52 aa5.72□□□□□ -1.49
TRAPPC2L-202ENST00000561840 MT1FP04733 61 aa5.72□□□□□ -1.49
TRAPPC2L-202ENST00000561840 K7EQZ3 153 aa5.71□□□□□ -1.5
TRAPPC2L-202ENST00000561840 TAX1BP3O14907 124 aa5.71□□□□□ -1.5
TRAPPC2L-202ENST00000561840 KRTAP9-3Q9BYQ3 159 aa5.68□□□□□ -1.5
TRAPPC2L-202ENST00000561840 H1FX-AS1Q4G0G2 97 aa5.66□□□□□ -1.5
TRAPPC2L-202ENST00000561840 SPCS1Q9Y6A9 102 aa5.66□□□□□ -1.5
TRAPPC2L-202ENST00000561840 IGKV2D-30A0A075B6S6 120 aa5.65□□□□□ -1.5
TRAPPC2L-202ENST00000561840 LCE2BO14633 110 aa5.65□□□□□ -1.5
TRAPPC2L-202ENST00000561840 IGKV2-30P06310 120 aa5.65□□□□□ -1.5
TRAPPC2L-202ENST00000561840 CASC2Q6XLA1 102 aa5.65□□□□□ -1.5
TRAPPC2L-202ENST00000561840 USH2AO75445 5202 aa5.63□□□□□ -1.51
TRAPPC2L-202ENST00000561840 C7orf65Q6ZTY9 151 aa5.63□□□□□ -1.51
TRAPPC2L-202ENST00000561840 HCG22E2RYF7 251 aa5.62□□□□□ -1.51
TRAPPC2L-202ENST00000561840 Q8N9L7 120 aa5.62□□□□□ -1.51
TRAPPC2L-202ENST00000561840 LINC00846Q9NV44 126 aa5.62□□□□□ -1.51
TRAPPC2L-202ENST00000561840 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.61□□□□□ -1.51
TRAPPC2L-202ENST00000561840 Q5W150 140 aa5.61□□□□□ -1.51
TRAPPC2L-202ENST00000561840 UBL5Q9BZL1 73 aa5.61□□□□□ -1.51
TRAPPC2L-202ENST00000561840 COL5A1-AS1Q5SY13 56 aa5.6□□□□□ -1.51
TRAPPC2L-202ENST00000561840 KRTAP19-1Q8IUB9 90 aa5.6□□□□□ -1.51
TRAPPC2L-202ENST00000561840 CXCL6P80162 114 aa5.59□□□□□ -1.51
TRAPPC2L-202ENST00000561840 SSPOA2VEC9 5147 aa5.58□□□□□ -1.52
TRAPPC2L-202ENST00000561840 SMCPP49901 116 aaPredicted RBP5.58□□□□□ -1.52
TRAPPC2L-202ENST00000561840 KRTAP9-7A8MTY7 169 aa5.57□□□□□ -1.52
TRAPPC2L-202ENST00000561840 C4orf26Q17RF5 130 aa5.55□□□□□ -1.52
TRAPPC2L-202ENST00000561840 PRO0461Q9UI25 63 aa5.54□□□□□ -1.52
TRAPPC2L-202ENST00000561840 K7EP34 96 aa5.53□□□□□ -1.52
TRAPPC2L-202ENST00000561840 FCGBPQ9Y6R7 5405 aaPredicted RBP5.51□□□□□ -1.53
TRAPPC2L-202ENST00000561840 GTF2H5Q6ZYL4 71 aa5.51□□□□□ -1.53
TRAPPC2L-202ENST00000561840 TP53AIP1Q9HCN2 124 aa5.49□□□□□ -1.53
TRAPPC2L-202ENST00000561840 KRTAP19-6Q3LI70 58 aa5.48□□□□□ -1.53
TRAPPC2L-202ENST00000561840 F8W1H4 67 aa5.47□□□□□ -1.53
TRAPPC2L-202ENST00000561840 C5orf47Q569G3 176 aa5.46□□□□□ -1.54
TRAPPC2L-202ENST00000561840 C1orf64Q8NEQ6 169 aa5.46□□□□□ -1.54
TRAPPC2L-202ENST00000561840 CSAG1Q6PB30 78 aa5.45□□□□□ -1.54
TRAPPC2L-202ENST00000561840 FAM236AA0A1B0GUQ0 79 aa5.44□□□□□ -1.54
TRAPPC2L-202ENST00000561840 FAM236BA0A1B0GV22 79 aa5.44□□□□□ -1.54
TRAPPC2L-202ENST00000561840 ETDBQ3ZM63 59 aa5.44□□□□□ -1.54
TRAPPC2L-202ENST00000561840 S4R3F8 94 aa5.44□□□□□ -1.54
TRAPPC2L-202ENST00000561840 PCP4L1A6NKN8 68 aa5.41□□□□□ -1.54
TRAPPC2L-202ENST00000561840 KRTAP3-1Q9BYR8 98 aa5.41□□□□□ -1.54
TRAPPC2L-202ENST00000561840 LCA10Q71F78 164 aa5.37□□□□□ -1.55
TRAPPC2L-202ENST00000561840 MACF1Q9UPN3 7388 aaKnown RBP5.37□□□□□ -1.55
TRAPPC2L-202ENST00000561840 ACYP1P07311 99 aa5.36□□□□□ -1.55
TRAPPC2L-202ENST00000561840 CYP4F30PQ9H0H9 118 aa5.36□□□□□ -1.55
TRAPPC2L-202ENST00000561840 SYNE2Q8WXH0 6885 aaKnown RBP5.33□□□□□ -1.56
TRAPPC2L-202ENST00000561840 TRAV22A0A0B4J277 110 aa5.32□□□□□ -1.56
TRAPPC2L-202ENST00000561840 LOC101927531A0A1B0GV80 90 aa5.32□□□□□ -1.56
TRAPPC2L-202ENST00000561840 HIST1H4AP62805 103 aaKnown RBP5.31□□□□□ -1.56
TRAPPC2L-202ENST00000561840 Q5VV11 94 aa5.3□□□□□ -1.56
TRAPPC2L-202ENST00000561840 ATP5EP2Q5VTU8 51 aa5.29□□□□□ -1.56
TRAPPC2L-202ENST00000561840 FAM240AA0A1B0GVK7 77 aa5.28□□□□□ -1.56
TRAPPC2L-202ENST00000561840 UQCRQO14949 82 aa5.28□□□□□ -1.56
TRAPPC2L-202ENST00000561840 KLKP1Q107X0 134 aa5.28□□□□□ -1.56
TRAPPC2L-202ENST00000561840 A6NN06 94 aa5.27□□□□□ -1.57
TRAPPC2L-202ENST00000561840 ATOX1O00244 68 aa5.27□□□□□ -1.57
TRAPPC2L-202ENST00000561840 SPRR2GQ9BYE4 73 aa5.27□□□□□ -1.57
TRAPPC2L-202ENST00000561840 KRTAP6-3Q3LI67 103 aa5.26□□□□□ -1.57
TRAPPC2L-202ENST00000561840 KRTAP3-3Q9BYR6 98 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms