RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 AKAP12Q02952 1782 aa-1.41□□□□□ -2.63
USP8-218ENST00000561330 RBP2P50120 134 aa-1.41□□□□□ -2.64
USP8-218ENST00000561330 NCMAPQ5T1S8 102 aa-1.41□□□□□ -2.64
USP8-218ENST00000561330 ANKRD26Q9UPS8 1709 aa-1.41□□□□□ -2.64
USP8-218ENST00000561330 ABCC10Q5T3U5 1492 aa-1.42□□□□□ -2.64
USP8-218ENST00000561330 MMP24-AS1A0A0U1RRL7 71 aa-1.42□□□□□ -2.64
USP8-218ENST00000561330 CEBPZOSA8MTT3 80 aa-1.42□□□□□ -2.64
USP8-218ENST00000561330 UMAD1C9J7I0 102 aa-1.42□□□□□ -2.64
USP8-218ENST00000561330 NDUFA4O00483 81 aa-1.42□□□□□ -2.64
USP8-218ENST00000561330 TNP1P09430 55 aa-1.42□□□□□ -2.64
USP8-218ENST00000561330 ACBD7Q8N6N7 88 aa-1.42□□□□□ -2.64
USP8-218ENST00000561330 ADGRG4Q8IZF6 3080 aa-1.42□□□□□ -2.64
USP8-218ENST00000561330 CDC42BPGQ6DT37 1551 aa-1.42□□□□□ -2.64
USP8-218ENST00000561330 TMEM131LA2VDJ0 1609 aa-1.43□□□□□ -2.64
USP8-218ENST00000561330 CCNB3Q8WWL7 1395 aa-1.43□□□□□ -2.64
USP8-218ENST00000561330 CFAP46Q8IYW2 2715 aa-1.43□□□□□ -2.64
USP8-218ENST00000561330 DIP2BQ9P265 1576 aa-1.43□□□□□ -2.64
USP8-218ENST00000561330 MGAQ8IWI9 3026 aa-1.43□□□□□ -2.64
USP8-218ENST00000561330 URB2Q14146 1524 aaKnown RBP-1.44□□□□□ -2.64
USP8-218ENST00000561330 DMXL2Q8TDJ6 3036 aa-1.45□□□□□ -2.64
USP8-218ENST00000561330 M0R143 59 aa-1.45□□□□□ -2.64
USP8-218ENST00000561330 LY75O60449 1722 aa-1.46□□□□□ -2.64
USP8-218ENST00000561330 SNRPFP62306 86 aaKnown RBP-1.46□□□□□ -2.64
USP8-218ENST00000561330 WT1-ASQ06250 92 aa-1.46□□□□□ -2.64
USP8-218ENST00000561330 RABAC1Q9UI14 185 aa-1.46□□□□□ -2.64
USP8-218ENST00000561330 TJP1Q07157 1748 aa-1.46□□□□□ -2.64
USP8-218ENST00000561330 PIK3C2BO00750 1634 aa-1.47□□□□□ -2.64
USP8-218ENST00000561330 CEP162Q5TB80 1403 aa-1.47□□□□□ -2.64
USP8-218ENST00000561330 IGLV5-48A0A075B6I7 105 aa-1.47□□□□□ -2.64
USP8-218ENST00000561330 LINC00643Q86TS7 51 aa-1.47□□□□□ -2.64
USP8-218ENST00000561330 RICTORQ6R327 1708 aa-1.47□□□□□ -2.64
USP8-218ENST00000561330 CSMD2Q7Z408 3487 aa-1.47□□□□□ -2.64
USP8-218ENST00000561330 THOC2Q8NI27 1593 aaKnown RBP-1.47□□□□□ -2.65
USP8-218ENST00000561330 ITSN2Q9NZM3 1697 aa-1.48□□□□□ -2.65
USP8-218ENST00000561330 KIAA0586Q9BVV6 1533 aa-1.48□□□□□ -2.65
USP8-218ENST00000561330 KIF1AQ12756 1690 aa-1.48□□□□□ -2.65
USP8-218ENST00000561330 ZC3H13Q5T200 1668 aaKnown RBP-1.48□□□□□ -2.65
USP8-218ENST00000561330 PPLO60437 1756 aa-1.49□□□□□ -2.65
USP8-218ENST00000561330 DEFB131BA0A096LNP1 70 aa-1.49□□□□□ -2.65
USP8-218ENST00000561330 MRPL33O75394 65 aaKnown RBP-1.49□□□□□ -2.65
USP8-218ENST00000561330 CFAP43Q8NDM7 1665 aa-1.49□□□□□ -2.65
USP8-218ENST00000561330 ATMQ13315 3056 aa-1.49□□□□□ -2.65
USP8-218ENST00000561330 NRAPQ86VF7 1730 aa-1.49□□□□□ -2.65
USP8-218ENST00000561330 CCDC88BA6NC98 1476 aa-1.5□□□□□ -2.65
USP8-218ENST00000561330 NREPQ16612 68 aa-1.5□□□□□ -2.65
USP8-218ENST00000561330 ZFHX4Q86UP3 3567 aa-1.51□□□□□ -2.65
USP8-218ENST00000561330 S100A16Q96FQ6 103 aaKnown RBP-1.51□□□□□ -2.65
USP8-218ENST00000561330 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-1.51□□□□□ -2.65
USP8-218ENST00000561330 PYY3Q5JQD4 70 aa-1.52□□□□□ -2.65
USP8-218ENST00000561330 SNHG12Q9BXW3 62 aa-1.52□□□□□ -2.65
USP8-218ENST00000561330 ITPR2Q14571 2701 aa-1.52□□□□□ -2.65
USP8-218ENST00000561330 A0A087WXM4 84 aa-1.53□□□□□ -2.65
USP8-218ENST00000561330 PVALEFA0A1B0GWK0 134 aa-1.53□□□□□ -2.65
USP8-218ENST00000561330 BVES-AS1Q5T3Y7 98 aa-1.53□□□□□ -2.65
USP8-218ENST00000561330 MINOS1Q5TGZ0 78 aa-1.53□□□□□ -2.65
USP8-218ENST00000561330 NOP10Q9NPE3 64 aaKnown RBP-1.53□□□□□ -2.65
USP8-218ENST00000561330 KIF14Q15058 1648 aa-1.54□□□□□ -2.66
USP8-218ENST00000561330 RPS27P42677 84 aaKnown RBP-1.54□□□□□ -2.66
USP8-218ENST00000561330 CRIP1P50238 77 aa-1.54□□□□□ -2.66
USP8-218ENST00000561330 RPS27LQ71UM5 84 aaKnown RBP-1.54□□□□□ -2.66
USP8-218ENST00000561330 UBL5Q9BZL1 73 aa-1.54□□□□□ -2.66
USP8-218ENST00000561330 Q9H521 79 aa-1.54□□□□□ -2.66
USP8-218ENST00000561330 TLN1Q9Y490 2541 aaKnown RBP-1.54□□□□□ -2.66
USP8-218ENST00000561330 MYO15AQ9UKN7 3530 aa-1.54□□□□□ -2.66
USP8-218ENST00000561330 LRRIQ1Q96JM4 1722 aa-1.54□□□□□ -2.66
USP8-218ENST00000561330 MAP3K4Q9Y6R4 1608 aa-1.55□□□□□ -2.66
USP8-218ENST00000561330 HFM1A2PYH4 1435 aa-1.55□□□□□ -2.66
USP8-218ENST00000561330 PKIAP61925 76 aa-1.55□□□□□ -2.66
USP8-218ENST00000561330 MAST1Q9Y2H9 1570 aa-1.55□□□□□ -2.66
USP8-218ENST00000561330 ARHGAP35Q9NRY4 1499 aa-1.56□□□□□ -2.66
USP8-218ENST00000561330 KANTRA0A1W2PQU2 76 aa-1.56□□□□□ -2.66
USP8-218ENST00000561330 H3BUA1 57 aa-1.56□□□□□ -2.66
USP8-218ENST00000561330 DEFB4AO15263 64 aa-1.56□□□□□ -2.66
USP8-218ENST00000561330 KRTAP19-6Q3LI70 58 aa-1.56□□□□□ -2.66
USP8-218ENST00000561330 ATP5EP2Q5VTU8 51 aa-1.56□□□□□ -2.66
USP8-218ENST00000561330 SMARCA2P51531 1590 aa-1.56□□□□□ -2.66
USP8-218ENST00000561330 FREM2Q5SZK8 3169 aa-1.57□□□□□ -2.66
USP8-218ENST00000561330 HMGA1P17096 107 aaKnown RBP-1.57□□□□□ -2.66
USP8-218ENST00000561330 SFTA3P0C7M3 94 aa-1.58□□□□□ -2.66
USP8-218ENST00000561330 FCER1GP30273 86 aa-1.58□□□□□ -2.66
USP8-218ENST00000561330 KCNQ1DNQ9H478 68 aa-1.58□□□□□ -2.66
USP8-218ENST00000561330 BOD1L1Q8NFC6 3051 aa-1.59□□□□□ -2.66
USP8-218ENST00000561330 S100A8P05109 93 aa-1.59□□□□□ -2.66
USP8-218ENST00000561330 SMIM13P0DJ93 91 aa-1.59□□□□□ -2.66
USP8-218ENST00000561330 RALGAPBQ86X10 1494 aa-1.59□□□□□ -2.66
USP8-218ENST00000561330 RNF17Q9BXT8 1623 aaKnown RBP-1.59□□□□□ -2.66
USP8-218ENST00000561330 A0A1B0GUL6 1792 aa-1.59□□□□□ -2.66
USP8-218ENST00000561330 ABCC3O15438 1527 aa-1.6□□□□□ -2.67
USP8-218ENST00000561330 C6orf48Q9UBA6 75 aa-1.6□□□□□ -2.67
USP8-218ENST00000561330 NCBP2-AS2Q69YL0 99 aa-1.61□□□□□ -2.67
USP8-218ENST00000561330 VPS8Q8N3P4 1428 aa-1.61□□□□□ -2.67
USP8-218ENST00000561330 PRUNE2Q8WUY3 3088 aa-1.61□□□□□ -2.67
USP8-218ENST00000561330 CRYBG3Q68DQ2 2970 aa-1.62□□□□□ -2.67
USP8-218ENST00000561330 MYO5CQ9NQX4 1742 aa-1.62□□□□□ -2.67
USP8-218ENST00000561330 INO80Q9ULG1 1556 aaPredicted RBP-1.62□□□□□ -2.67
USP8-218ENST00000561330 LINC01546A6NGU7 62 aa-1.62□□□□□ -2.67
USP8-218ENST00000561330 MT1FP04733 61 aa-1.62□□□□□ -2.67
USP8-218ENST00000561330 V9GYS6 101 aa-1.62□□□□□ -2.67
USP8-218ENST00000561330 KDM5DQ9BY66 1539 aa-1.62□□□□□ -2.67
USP8-218ENST00000561330 VPS13CQ709C8 3753 aa-1.63□□□□□ -2.67
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms