RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 NOTCH2NLQ7Z3S9 236 aa10.48□□□□□ -0.73
TSPAN3-210ENST00000561277 A0A1B0GVX0 72 aa10.45□□□□□ -0.74
TSPAN3-210ENST00000561277 A0A1B0GW54 56 aa10.45□□□□□ -0.74
TSPAN3-210ENST00000561277 PCP4L1A6NKN8 68 aa10.45□□□□□ -0.74
TSPAN3-210ENST00000561277 KRTAP16-1A8MUX0 517 aa10.45□□□□□ -0.74
TSPAN3-210ENST00000561277 KRTAP19-2Q3LHN2 52 aa10.45□□□□□ -0.74
TSPAN3-210ENST00000561277 J3KT08 172 aa10.44□□□□□ -0.74
TSPAN3-210ENST00000561277 LCE2CQ5TA81 110 aa10.43□□□□□ -0.74
TSPAN3-210ENST00000561277 C8orf87E5RJ46 101 aa10.4□□□□□ -0.74
TSPAN3-210ENST00000561277 NREPQ16612 68 aa10.38□□□□□ -0.75
TSPAN3-210ENST00000561277 NDUFB1O75438 58 aa10.37□□□□□ -0.75
TSPAN3-210ENST00000561277 SMCPP49901 116 aaPredicted RBP10.36□□□□□ -0.75
TSPAN3-210ENST00000561277 K7EP34 96 aa10.35□□□□□ -0.75
TSPAN3-210ENST00000561277 COX6B2Q6YFQ2 88 aa10.35□□□□□ -0.75
TSPAN3-210ENST00000561277 A8MWP4 228 aa10.35□□□□□ -0.75
TSPAN3-210ENST00000561277 IGKV3D-7A0A0C4DH55 119 aa10.31□□□□□ -0.76
TSPAN3-210ENST00000561277 MT1HP80294 61 aa10.31□□□□□ -0.76
TSPAN3-210ENST00000561277 PRO0461Q9UI25 63 aa10.31□□□□□ -0.76
TSPAN3-210ENST00000561277 C8orf17Q9NRJ1 99 aa10.29□□□□□ -0.76
TSPAN3-210ENST00000561277 GTF2H5Q6ZYL4 71 aa10.25□□□□□ -0.77
TSPAN3-210ENST00000561277 PRR15Q8IV56 129 aa10.25□□□□□ -0.77
TSPAN3-210ENST00000561277 K7EQZ3 153 aa10.22□□□□□ -0.77
TSPAN3-210ENST00000561277 BPY2O14599 106 aa10.21□□□□□ -0.78
TSPAN3-210ENST00000561277 Q6ZVQ6 151 aa10.21□□□□□ -0.78
TSPAN3-210ENST00000561277 Q8N9P0 234 aaPredicted RBP10.21□□□□□ -0.78
TSPAN3-210ENST00000561277 M0R2T5 61 aa10.19□□□□□ -0.78
TSPAN3-210ENST00000561277 ZCCHC13Q8WW36 166 aaKnown RBP10.19□□□□□ -0.78
TSPAN3-210ENST00000561277 MMP24-AS1A0A0U1RRL7 71 aa10.18□□□□□ -0.78
TSPAN3-210ENST00000561277 FLGP20930 4061 aaPredicted RBP10.16□□□□□ -0.78
TSPAN3-210ENST00000561277 F8W1H4 67 aa10.14□□□□□ -0.79
TSPAN3-210ENST00000561277 KRTAP9-2Q9BYQ4 174 aa10.14□□□□□ -0.79
TSPAN3-210ENST00000561277 LINC00846Q9NV44 126 aa10.14□□□□□ -0.79
TSPAN3-210ENST00000561277 Q8N9L7 120 aa10.13□□□□□ -0.79
TSPAN3-210ENST00000561277 MRPL34Q9BQ48 92 aaKnown RBP10.13□□□□□ -0.79
TSPAN3-210ENST00000561277 TMEM254Q8TBM7 123 aa10.12□□□□□ -0.79
TSPAN3-210ENST00000561277 hDV103S1A0JD37 113 aa10.11□□□□□ -0.79
TSPAN3-210ENST00000561277 ETDBQ3ZM63 59 aa10.11□□□□□ -0.79
TSPAN3-210ENST00000561277 UBL5Q9BZL1 73 aa10.11□□□□□ -0.79
TSPAN3-210ENST00000561277 HRES1P13985 223 aa10.09□□□□□ -0.79
TSPAN3-210ENST00000561277 FAM236DA0A1B0GTK5 79 aa10.09□□□□□ -0.79
TSPAN3-210ENST00000561277 FAM236CP0DP71 79 aa10.09□□□□□ -0.79
TSPAN3-210ENST00000561277 KRTAP10-6P60371 365 aaPredicted RBP10.08□□□□□ -0.8
TSPAN3-210ENST00000561277 NDUFS5O43920 106 aa10.07□□□□□ -0.8
TSPAN3-210ENST00000561277 SPINK7P58062 85 aa10.07□□□□□ -0.8
TSPAN3-210ENST00000561277 RBM12B-AS1Q9P1G2 102 aa10.07□□□□□ -0.8
TSPAN3-210ENST00000561277 LORP23490 312 aaPredicted RBP10.05□□□□□ -0.8
TSPAN3-210ENST00000561277 WFDC13Q8IUB5 93 aa10.05□□□□□ -0.8
TSPAN3-210ENST00000561277 MPLKIPQ8TAP9 179 aa10.05□□□□□ -0.8
TSPAN3-210ENST00000561277 CASC2Q6XLA1 102 aa10.01□□□□□ -0.81
TSPAN3-210ENST00000561277 HCG22E2RYF7 251 aa9.95□□□□□ -0.82
TSPAN3-210ENST00000561277 LCE2DQ5TA82 110 aaPredicted RBP9.93□□□□□ -0.82
TSPAN3-210ENST00000561277 Q5W150 140 aa9.9□□□□□ -0.82
TSPAN3-210ENST00000561277 CXCL6P80162 114 aa9.89□□□□□ -0.83
TSPAN3-210ENST00000561277 IGKV2D-30A0A075B6S6 120 aa9.87□□□□□ -0.83
TSPAN3-210ENST00000561277 IGKV2-30P06310 120 aa9.87□□□□□ -0.83
TSPAN3-210ENST00000561277 A0A1B0GV90 55 aa9.86□□□□□ -0.83
TSPAN3-210ENST00000561277 ACYP1P07311 99 aa9.84□□□□□ -0.83
TSPAN3-210ENST00000561277 C7orf65Q6ZTY9 151 aa9.83□□□□□ -0.84
TSPAN3-210ENST00000561277 FSIP2Q5CZC0 6907 aa9.82□□□□□ -0.84
TSPAN3-210ENST00000561277 FAM240AA0A1B0GVK7 77 aa9.8□□□□□ -0.84
TSPAN3-210ENST00000561277 KRTAP9-8Q9BYQ0 159 aa9.77□□□□□ -0.85
TSPAN3-210ENST00000561277 KRTAP9-6A0A140TA67 174 aa9.72□□□□□ -0.85
TSPAN3-210ENST00000561277 ATP5EP2Q5VTU8 51 aa9.71□□□□□ -0.85
TSPAN3-210ENST00000561277 TP53AIP1Q9HCN2 124 aa9.71□□□□□ -0.85
TSPAN3-210ENST00000561277 HIST1H4AP62805 103 aaKnown RBP9.68□□□□□ -0.86
TSPAN3-210ENST00000561277 MT2AP02795 61 aa9.67□□□□□ -0.86
TSPAN3-210ENST00000561277 H1FX-AS1Q4G0G2 97 aa9.67□□□□□ -0.86
TSPAN3-210ENST00000561277 C4orf26Q17RF5 130 aa9.67□□□□□ -0.86
TSPAN3-210ENST00000561277 LINC00643Q86TS7 51 aa9.62□□□□□ -0.87
TSPAN3-210ENST00000561277 CRCT1Q9UGL9 99 aa9.62□□□□□ -0.87
TSPAN3-210ENST00000561277 MT1FP04733 61 aa9.61□□□□□ -0.87
TSPAN3-210ENST00000561277 A0A087WVE0 104 aa9.58□□□□□ -0.88
TSPAN3-210ENST00000561277 KRTAP10-10P60014 251 aa9.58□□□□□ -0.88
TSPAN3-210ENST00000561277 TRAV22A0A0B4J277 110 aa9.55□□□□□ -0.88
TSPAN3-210ENST00000561277 J3QR89 54 aa9.53□□□□□ -0.88
TSPAN3-210ENST00000561277 C1orf64Q8NEQ6 169 aa9.5□□□□□ -0.89
TSPAN3-210ENST00000561277 KRTAP3-1Q9BYR8 98 aa9.49□□□□□ -0.89
TSPAN3-210ENST00000561277 CYP4F30PQ9H0H9 118 aa9.49□□□□□ -0.89
TSPAN3-210ENST00000561277 UQCRQO14949 82 aa9.47□□□□□ -0.89
TSPAN3-210ENST00000561277 LOC101927531A0A1B0GV80 90 aa9.46□□□□□ -0.9
TSPAN3-210ENST00000561277 KRTAP9-3Q9BYQ3 159 aa9.46□□□□□ -0.9
TSPAN3-210ENST00000561277 H0Y9P7 68 aa9.44□□□□□ -0.9
TSPAN3-210ENST00000561277 USH2AO75445 5202 aa9.42□□□□□ -0.9
TSPAN3-210ENST00000561277 S4R3F8 94 aa9.41□□□□□ -0.9
TSPAN3-210ENST00000561277 ATOX1O00244 68 aa9.41□□□□□ -0.9
TSPAN3-210ENST00000561277 C5orf47Q569G3 176 aa9.41□□□□□ -0.9
TSPAN3-210ENST00000561277 LCE2BO14633 110 aa9.38□□□□□ -0.91
TSPAN3-210ENST00000561277 LCA10Q71F78 164 aa9.35□□□□□ -0.91
TSPAN3-210ENST00000561277 OCR1Q9BZK8 76 aa9.33□□□□□ -0.92
TSPAN3-210ENST00000561277 LINC00208Q96KT6 92 aa9.31□□□□□ -0.92
TSPAN3-210ENST00000561277 SSPOA2VEC9 5147 aa9.31□□□□□ -0.92
TSPAN3-210ENST00000561277 CSAG1Q6PB30 78 aa9.29□□□□□ -0.92
TSPAN3-210ENST00000561277 MP68P56378 58 aa9.28□□□□□ -0.92
TSPAN3-210ENST00000561277 K7ERU9 68 aa9.26□□□□□ -0.93
TSPAN3-210ENST00000561277 SCGB1A1P11684 91 aa9.26□□□□□ -0.93
TSPAN3-210ENST00000561277 KLKP1Q107X0 134 aa9.23□□□□□ -0.93
TSPAN3-210ENST00000561277 FAM236AA0A1B0GUQ0 79 aa9.22□□□□□ -0.93
TSPAN3-210ENST00000561277 FAM236BA0A1B0GV22 79 aa9.22□□□□□ -0.93
TSPAN3-210ENST00000561277 KRTAP3-3Q9BYR6 98 aa9.21□□□□□ -0.93
TSPAN3-210ENST00000561277 MT-ATP8P03928 68 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms