RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 KRTAP25-1Q3LHN0 102 aa4.03□□□□□ -1.76
TSPAN3-209ENST00000560715 A0A0G2JQZ4 141 aa4.03□□□□□ -1.76
TSPAN3-209ENST00000560715 A0A1W2PNN7 141 aa4.03□□□□□ -1.76
TSPAN3-209ENST00000560715 VWFP04275 2813 aa4.02□□□□□ -1.77
TSPAN3-209ENST00000560715 DEFB4AO15263 64 aa4.02□□□□□ -1.77
TSPAN3-209ENST00000560715 COL6A5A8TX70 2615 aa4.02□□□□□ -1.77
TSPAN3-209ENST00000560715 LELP1Q5T871 98 aa4.02□□□□□ -1.77
TSPAN3-209ENST00000560715 TP53AIP1Q9HCN2 124 aa4.02□□□□□ -1.77
TSPAN3-209ENST00000560715 IGKV2-24A0A0C4DH68 120 aa4.01□□□□□ -1.77
TSPAN3-209ENST00000560715 TENM1Q9UKZ4 2725 aa4.01□□□□□ -1.77
TSPAN3-209ENST00000560715 MMP24-AS1A0A0U1RRL7 71 aa4.01□□□□□ -1.77
TSPAN3-209ENST00000560715 ATRQ13535 2644 aa4.01□□□□□ -1.77
TSPAN3-209ENST00000560715 KRTAP10-11P60412 298 aa4□□□□□ -1.77
TSPAN3-209ENST00000560715 LINC00472Q9H8W2 130 aa4□□□□□ -1.77
TSPAN3-209ENST00000560715 DNAH3Q8TD57 4116 aa3.99□□□□□ -1.77
TSPAN3-209ENST00000560715 STAB1Q9NY15 2570 aa3.99□□□□□ -1.77
TSPAN3-209ENST00000560715 H3BNG1 76 aa3.99□□□□□ -1.77
TSPAN3-209ENST00000560715 KRTAP26-1Q6PEX3 210 aa3.99□□□□□ -1.77
TSPAN3-209ENST00000560715 MIR22HGQ0VDD5 57 aa3.98□□□□□ -1.77
TSPAN3-209ENST00000560715 HTN3P15516 51 aa3.98□□□□□ -1.77
TSPAN3-209ENST00000560715 A0A1B0GU69 56 aa3.97□□□□□ -1.77
TSPAN3-209ENST00000560715 LINC00483Q53H64 154 aa3.97□□□□□ -1.77
TSPAN3-209ENST00000560715 NBEAL2Q6ZNJ1 2754 aa3.97□□□□□ -1.77
TSPAN3-209ENST00000560715 C20orf166-AS1Q96NR2 134 aa3.96□□□□□ -1.77
TSPAN3-209ENST00000560715 UQCR11O14957 56 aa3.96□□□□□ -1.78
TSPAN3-209ENST00000560715 Q5W150 140 aa3.96□□□□□ -1.78
TSPAN3-209ENST00000560715 ACYP2P14621 99 aa3.95□□□□□ -1.78
TSPAN3-209ENST00000560715 IGLV7-43P04211 117 aa3.94□□□□□ -1.78
TSPAN3-209ENST00000560715 P0C880 135 aa3.93□□□□□ -1.78
TSPAN3-209ENST00000560715 NBEAL1Q6ZS30 2694 aa3.92□□□□□ -1.78
TSPAN3-209ENST00000560715 ALMS1Q8TCU4 4167 aa3.92□□□□□ -1.78
TSPAN3-209ENST00000560715 LINC01556Q5JQF7 62 aa3.9□□□□□ -1.79
TSPAN3-209ENST00000560715 DMAC1Q96GE9 116 aa3.89□□□□□ -1.79
TSPAN3-209ENST00000560715 K7EIL1 84 aa3.88□□□□□ -1.79
TSPAN3-209ENST00000560715 HUWE1Q7Z6Z7 4374 aaKnown RBP3.88□□□□□ -1.79
TSPAN3-209ENST00000560715 KRTAP19-4Q3LI73 84 aa3.88□□□□□ -1.79
TSPAN3-209ENST00000560715 KRTAP9-4Q9BYQ2 154 aa3.88□□□□□ -1.79
TSPAN3-209ENST00000560715 PKD1L1Q8TDX9 2849 aa3.88□□□□□ -1.79
TSPAN3-209ENST00000560715 SPRR1BP22528 89 aa3.88□□□□□ -1.79
TSPAN3-209ENST00000560715 PRLHP81277 87 aa3.88□□□□□ -1.79
TSPAN3-209ENST00000560715 Q96NJ1 140 aa3.88□□□□□ -1.79
TSPAN3-209ENST00000560715 MRPL34Q9BQ48 92 aaKnown RBP3.88□□□□□ -1.79
TSPAN3-209ENST00000560715 R4GN34 69 aa3.88□□□□□ -1.79
TSPAN3-209ENST00000560715 MEGF8Q7Z7M0 2845 aa3.86□□□□□ -1.79
TSPAN3-209ENST00000560715 DNAH1Q9P2D7 4330 aa3.85□□□□□ -1.79
TSPAN3-209ENST00000560715 KRTAP13-3Q3SY46 172 aa3.85□□□□□ -1.79
TSPAN3-209ENST00000560715 LCE4AQ5TA78 99 aa3.84□□□□□ -1.79
TSPAN3-209ENST00000560715 LCE5AQ5TCM9 118 aa3.84□□□□□ -1.79
TSPAN3-209ENST00000560715 TENM3Q9P273 2699 aa3.84□□□□□ -1.8
TSPAN3-209ENST00000560715 A0A1B0GU33 70 aa3.84□□□□□ -1.8
TSPAN3-209ENST00000560715 TENM2Q9NT68 2774 aa3.82□□□□□ -1.8
TSPAN3-209ENST00000560715 MGAM2Q2M2H8 2515 aa3.82□□□□□ -1.8
TSPAN3-209ENST00000560715 PRKDCP78527 4128 aaKnown RBP3.82□□□□□ -1.8
TSPAN3-209ENST00000560715 DNAH9Q9NYC9 4486 aa3.82□□□□□ -1.8
TSPAN3-209ENST00000560715 DYNC2H1Q8NCM8 4307 aaKnown RBP3.81□□□□□ -1.8
TSPAN3-209ENST00000560715 A0A096LNI7 61 aa3.81□□□□□ -1.8
TSPAN3-209ENST00000560715 LINC00304Q8N9R0 145 aa3.81□□□□□ -1.8
TSPAN3-209ENST00000560715 TGP01266 2768 aa3.78□□□□□ -1.8
TSPAN3-209ENST00000560715 APLNQ9ULZ1 77 aa3.78□□□□□ -1.8
TSPAN3-209ENST00000560715 NOTCH1P46531 2555 aa3.78□□□□□ -1.8
TSPAN3-209ENST00000560715 KRTAP9-6A0A140TA67 174 aa3.77□□□□□ -1.81
TSPAN3-209ENST00000560715 KRTAP9-7A8MTY7 169 aa3.77□□□□□ -1.81
TSPAN3-209ENST00000560715 LYSTQ99698 3801 aa3.77□□□□□ -1.81
TSPAN3-209ENST00000560715 KRTAP9-9Q9BYP9 154 aa3.77□□□□□ -1.81
TSPAN3-209ENST00000560715 UBE2DNLQ8IWF7 75 aa3.76□□□□□ -1.81
TSPAN3-209ENST00000560715 NUPR2A6NF83 97 aa3.75□□□□□ -1.81
TSPAN3-209ENST00000560715 COL7A1Q02388 2944 aa3.74□□□□□ -1.81
TSPAN3-209ENST00000560715 KRTAP11-1Q8IUC1 163 aa3.74□□□□□ -1.81
TSPAN3-209ENST00000560715 KRTAP1-5Q9BYS1 174 aa3.74□□□□□ -1.81
TSPAN3-209ENST00000560715 H0YAA0 97 aa3.74□□□□□ -1.81
TSPAN3-209ENST00000560715 LY6G6CO95867 125 aa3.74□□□□□ -1.81
TSPAN3-209ENST00000560715 DNAH7Q8WXX0 4024 aa3.74□□□□□ -1.81
TSPAN3-209ENST00000560715 DNAH10Q8IVF4 4471 aa3.74□□□□□ -1.81
TSPAN3-209ENST00000560715 CSMD3Q7Z407 3707 aa3.73□□□□□ -1.81
TSPAN3-209ENST00000560715 PLECQ15149 4684 aaKnown RBP3.73□□□□□ -1.81
TSPAN3-209ENST00000560715 Q6ZSA8 131 aa3.72□□□□□ -1.81
TSPAN3-209ENST00000560715 NBDYA0A0U1RRE5 68 aa3.71□□□□□ -1.82
TSPAN3-209ENST00000560715 A0A087WTM6 91 aa3.71□□□□□ -1.82
TSPAN3-209ENST00000560715 SPINT4Q6UDR6 99 aa3.7□□□□□ -1.82
TSPAN3-209ENST00000560715 KRTAP13-1Q8IUC0 172 aa3.7□□□□□ -1.82
TSPAN3-209ENST00000560715 CRIPTQ9P021 101 aa3.7□□□□□ -1.82
TSPAN3-209ENST00000560715 SSBP3-AS1Q7Z2R9 100 aa3.69□□□□□ -1.82
TSPAN3-209ENST00000560715 SRRM2Q9UQ35 2752 aaKnown RBP3.69□□□□□ -1.82
TSPAN3-209ENST00000560715 VPS13DQ5THJ4 4388 aa3.69□□□□□ -1.82
TSPAN3-209ENST00000560715 STARD9Q9P2P6 4700 aa3.68□□□□□ -1.82
TSPAN3-209ENST00000560715 KMT2CQ8NEZ4 4911 aaKnown RBP3.68□□□□□ -1.82
TSPAN3-209ENST00000560715 Q6ZRN7 208 aaPredicted RBP3.68□□□□□ -1.82
TSPAN3-209ENST00000560715 PSORS1C2Q9UIG4 136 aa3.68□□□□□ -1.82
TSPAN3-209ENST00000560715 STAB2Q8WWQ8 2551 aa3.67□□□□□ -1.82
TSPAN3-209ENST00000560715 RYR3Q15413 4870 aa3.67□□□□□ -1.82
TSPAN3-209ENST00000560715 SPINK6Q6UWN8 80 aa3.66□□□□□ -1.82
TSPAN3-209ENST00000560715 SPINK1P00995 79 aa3.64□□□□□ -1.83
TSPAN3-209ENST00000560715 XP32Q5T750 250 aa3.64□□□□□ -1.83
TSPAN3-209ENST00000560715 HECTD4Q9Y4D8 3996 aa3.63□□□□□ -1.83
TSPAN3-209ENST00000560715 KMT2AQ03164 3969 aa3.63□□□□□ -1.83
TSPAN3-209ENST00000560715 DNAH6Q9C0G6 4158 aa3.63□□□□□ -1.83
TSPAN3-209ENST00000560715 H1FX-AS1Q4G0G2 97 aa3.62□□□□□ -1.83
TSPAN3-209ENST00000560715 FLG2Q5D862 2391 aaPredicted RBP3.62□□□□□ -1.83
TSPAN3-209ENST00000560715 SPACA4Q8TDM5 124 aa3.62□□□□□ -1.83
TSPAN3-209ENST00000560715 ANAPC11Q9NYG5 84 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms