RNA–Protein interactions for RNA: ENST00000560269.1

HMBOX1-213, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-213ENST00000560269 CDIP1Q9H305 208 aa7.55□□□□□ -1.2
HMBOX1-213ENST00000560269 IGKV3D-7A0A0C4DH55 119 aa7.54□□□□□ -1.2
HMBOX1-213ENST00000560269 A0A1B0GVX0 72 aa7.54□□□□□ -1.2
HMBOX1-213ENST00000560269 NDUFB1O75438 58 aa7.54□□□□□ -1.2
HMBOX1-213ENST00000560269 TPRXLQ17RH7 258 aa7.54□□□□□ -1.2
HMBOX1-213ENST00000560269 KRTAP13-3Q3SY46 172 aa7.54□□□□□ -1.2
HMBOX1-213ENST00000560269 ATP5EP2Q5VTU8 51 aa7.53□□□□□ -1.2
HMBOX1-213ENST00000560269 PRR15Q8IV56 129 aa7.53□□□□□ -1.2
HMBOX1-213ENST00000560269 K7EQZ3 153 aa7.52□□□□□ -1.21
HMBOX1-213ENST00000560269 IGHV6-1A0A0B4J1U7 121 aa7.51□□□□□ -1.21
HMBOX1-213ENST00000560269 C8orf87E5RJ46 101 aa7.5□□□□□ -1.21
HMBOX1-213ENST00000560269 LPAP08519 4548 aa7.5□□□□□ -1.21
HMBOX1-213ENST00000560269 Q8N9L7 120 aa7.49□□□□□ -1.21
HMBOX1-213ENST00000560269 C9orf92A6NGG3 77 aa7.48□□□□□ -1.21
HMBOX1-213ENST00000560269 LINC00313P59037 77 aa7.48□□□□□ -1.21
HMBOX1-213ENST00000560269 NOTCH2NLQ7Z3S9 236 aa7.48□□□□□ -1.21
HMBOX1-213ENST00000560269 KRTAP3-3Q9BYR6 98 aa7.48□□□□□ -1.21
HMBOX1-213ENST00000560269 KRTAP3-2Q9BYR7 98 aa7.48□□□□□ -1.21
HMBOX1-213ENST00000560269 C8orf17Q9NRJ1 99 aa7.47□□□□□ -1.21
HMBOX1-213ENST00000560269 MMP24-AS1A0A0U1RRL7 71 aa7.44□□□□□ -1.22
HMBOX1-213ENST00000560269 KRTAP16-1A8MUX0 517 aa7.44□□□□□ -1.22
HMBOX1-213ENST00000560269 XP32Q5T750 250 aa7.43□□□□□ -1.22
HMBOX1-213ENST00000560269 LRP2P98164 4655 aa7.43□□□□□ -1.22
HMBOX1-213ENST00000560269 MT-ATP8P03928 68 aa7.4□□□□□ -1.22
HMBOX1-213ENST00000560269 HIST1H4AP62805 103 aaKnown RBP7.4□□□□□ -1.22
HMBOX1-213ENST00000560269 hDV103S1A0JD37 113 aa7.39□□□□□ -1.23
HMBOX1-213ENST00000560269 HCG22E2RYF7 251 aa7.39□□□□□ -1.23
HMBOX1-213ENST00000560269 TMEM254Q8TBM7 123 aa7.39□□□□□ -1.23
HMBOX1-213ENST00000560269 C20orf166-AS1Q96NR2 134 aa7.39□□□□□ -1.23
HMBOX1-213ENST00000560269 CASC2Q6XLA1 102 aa7.38□□□□□ -1.23
HMBOX1-213ENST00000560269 A8MUU9 505 aa7.37□□□□□ -1.23
HMBOX1-213ENST00000560269 WFDC13Q8IUB5 93 aa7.37□□□□□ -1.23
HMBOX1-213ENST00000560269 MRPL34Q9BQ48 92 aaKnown RBP7.37□□□□□ -1.23
HMBOX1-213ENST00000560269 IMUPQ9GZP8 106 aa7.37□□□□□ -1.23
HMBOX1-213ENST00000560269 A0A087WVE0 104 aa7.36□□□□□ -1.23
HMBOX1-213ENST00000560269 Q75L30 129 aa7.36□□□□□ -1.23
HMBOX1-213ENST00000560269 Q8N9P0 234 aaPredicted RBP7.36□□□□□ -1.23
HMBOX1-213ENST00000560269 RPL37P61927 97 aaKnown RBP7.35□□□□□ -1.23
HMBOX1-213ENST00000560269 MUC17Q685J3 4493 aa7.3□□□□□ -1.24
HMBOX1-213ENST00000560269 SEC61BP60468 96 aaKnown RBP7.27□□□□□ -1.25
HMBOX1-213ENST00000560269 NDUFS5O43920 106 aa7.26□□□□□ -1.25
HMBOX1-213ENST00000560269 ATP11AUNQ6ZP68 121 aa7.26□□□□□ -1.25
HMBOX1-213ENST00000560269 PCOTHQ58A44 107 aa7.25□□□□□ -1.25
HMBOX1-213ENST00000560269 ZCCHC13Q8WW36 166 aaKnown RBP7.24□□□□□ -1.25
HMBOX1-213ENST00000560269 TP53AIP1Q9HCN2 124 aa7.23□□□□□ -1.25
HMBOX1-213ENST00000560269 FAM236AA0A1B0GUQ0 79 aa7.21□□□□□ -1.26
HMBOX1-213ENST00000560269 FAM236BA0A1B0GV22 79 aa7.21□□□□□ -1.26
HMBOX1-213ENST00000560269 Q5W150 140 aa7.19□□□□□ -1.26
HMBOX1-213ENST00000560269 SCGB1A1P11684 91 aa7.18□□□□□ -1.26
HMBOX1-213ENST00000560269 OCR1Q9BZK8 76 aa7.18□□□□□ -1.26
HMBOX1-213ENST00000560269 UBR4Q5T4S7 5183 aa7.17□□□□□ -1.26
HMBOX1-213ENST00000560269 UQCRQO14949 82 aa7.17□□□□□ -1.26
HMBOX1-213ENST00000560269 SMIM20Q8N5G0 67 aa7.13□□□□□ -1.27
HMBOX1-213ENST00000560269 KRTAP4-1Q9BYQ7 146 aa7.13□□□□□ -1.27
HMBOX1-213ENST00000560269 TRAV22A0A0B4J277 110 aa7.12□□□□□ -1.27
HMBOX1-213ENST00000560269 ATOX1O00244 68 aa7.12□□□□□ -1.27
HMBOX1-213ENST00000560269 TRAV7A0A075B6U4 112 aa7.09□□□□□ -1.27
HMBOX1-213ENST00000560269 H0Y9P7 68 aa7.08□□□□□ -1.28
HMBOX1-213ENST00000560269 C5orf47Q569G3 176 aa7.08□□□□□ -1.28
HMBOX1-213ENST00000560269 RNF213Q63HN8 5207 aa7.07□□□□□ -1.28
HMBOX1-213ENST00000560269 SPINK7P58062 85 aa7.07□□□□□ -1.28
HMBOX1-213ENST00000560269 IGKV2-30P06310 120 aa7.06□□□□□ -1.28
HMBOX1-213ENST00000560269 C7orf65Q6ZTY9 151 aa7.05□□□□□ -1.28
HMBOX1-213ENST00000560269 IGKV2D-30A0A075B6S6 120 aa7.04□□□□□ -1.28
HMBOX1-213ENST00000560269 MP68P56378 58 aa7.04□□□□□ -1.28
HMBOX1-213ENST00000560269 SERP2Q8N6R1 65 aa7.04□□□□□ -1.28
HMBOX1-213ENST00000560269 MUC2Q02817 5179 aa7.03□□□□□ -1.28
HMBOX1-213ENST00000560269 LOC101927531A0A1B0GV80 90 aa7.03□□□□□ -1.28
HMBOX1-213ENST00000560269 H3BPC8 53 aa7.03□□□□□ -1.28
HMBOX1-213ENST00000560269 HRES1P13985 223 aa7.01□□□□□ -1.29
HMBOX1-213ENST00000560269 C1orf64Q8NEQ6 169 aa7□□□□□ -1.29
HMBOX1-213ENST00000560269 LINC00208Q96KT6 92 aa7□□□□□ -1.29
HMBOX1-213ENST00000560269 CYP4F30PQ9H0H9 118 aa7□□□□□ -1.29
HMBOX1-213ENST00000560269 MPLKIPQ8TAP9 179 aa6.97□□□□□ -1.29
HMBOX1-213ENST00000560269 A0A0U1RQV1 116 aa6.95□□□□□ -1.3
HMBOX1-213ENST00000560269 COX7CP15954 63 aa6.95□□□□□ -1.3
HMBOX1-213ENST00000560269 ANAPC13Q9BS18 74 aa6.95□□□□□ -1.3
HMBOX1-213ENST00000560269 KRTAP19-2Q3LHN2 52 aa6.92□□□□□ -1.3
HMBOX1-213ENST00000560269 RBM12B-AS1Q9P1G2 102 aa6.92□□□□□ -1.3
HMBOX1-213ENST00000560269 KLKP1Q107X0 134 aa6.91□□□□□ -1.3
HMBOX1-213ENST00000560269 C20orf197Q8N268 126 aa6.91□□□□□ -1.3
HMBOX1-213ENST00000560269 C4orf26Q17RF5 130 aa6.88□□□□□ -1.31
HMBOX1-213ENST00000560269 SNURFQ9Y675 71 aa6.88□□□□□ -1.31
HMBOX1-213ENST00000560269 FAT4Q6V0I7 4981 aa6.88□□□□□ -1.31
HMBOX1-213ENST00000560269 LCE2CQ5TA81 110 aa6.86□□□□□ -1.31
HMBOX1-213ENST00000560269 COX6B2Q6YFQ2 88 aa6.86□□□□□ -1.31
HMBOX1-213ENST00000560269 FAM236DA0A1B0GTK5 79 aa6.84□□□□□ -1.31
HMBOX1-213ENST00000560269 FAM236CP0DP71 79 aa6.84□□□□□ -1.31
HMBOX1-213ENST00000560269 KRTAP3-1Q9BYR8 98 aa6.81□□□□□ -1.32
HMBOX1-213ENST00000560269 CCDC179H3BU77 68 aa6.8□□□□□ -1.32
HMBOX1-213ENST00000560269 H1FX-AS1Q4G0G2 97 aa6.78□□□□□ -1.32
HMBOX1-213ENST00000560269 NDUFC1O43677 76 aa6.77□□□□□ -1.33
HMBOX1-213ENST00000560269 CYSTM1Q9H1C7 97 aa6.77□□□□□ -1.33
HMBOX1-213ENST00000560269 FLGP20930 4061 aaPredicted RBP6.75□□□□□ -1.33
HMBOX1-213ENST00000560269 A8MUN3 132 aa6.75□□□□□ -1.33
HMBOX1-213ENST00000560269 H7BZZ5 65 aa6.74□□□□□ -1.33
HMBOX1-213ENST00000560269 SPANXA2-OT1Q8N9U9 137 aa6.74□□□□□ -1.33
HMBOX1-213ENST00000560269 MT1HP80294 61 aa6.73□□□□□ -1.33
HMBOX1-213ENST00000560269 DMAC1Q96GE9 116 aa6.73□□□□□ -1.33
HMBOX1-213ENST00000560269 LCE2AQ5TA79 106 aaPredicted RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 417.5 ms