RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 CDIP1Q9H305 208 aa5.84□□□□□ -1.47
TPM1-221ENST00000559831 IGLV7-46A0A075B6I9 117 aa5.83□□□□□ -1.48
TPM1-221ENST00000559831 LINC00643Q86TS7 51 aa5.83□□□□□ -1.48
TPM1-221ENST00000559831 IGHV6-1A0A0B4J1U7 121 aa5.82□□□□□ -1.48
TPM1-221ENST00000559831 A8MWP4 228 aa5.82□□□□□ -1.48
TPM1-221ENST00000559831 NDUFB1O75438 58 aa5.82□□□□□ -1.48
TPM1-221ENST00000559831 DSCR10P59022 87 aa5.82□□□□□ -1.48
TPM1-221ENST00000559831 CXCL6P80162 114 aa5.81□□□□□ -1.48
TPM1-221ENST00000559831 ATP5EP2Q5VTU8 51 aa5.81□□□□□ -1.48
TPM1-221ENST00000559831 Q8N9L7 120 aa5.81□□□□□ -1.48
TPM1-221ENST00000559831 A0A1B0GVX0 72 aa5.8□□□□□ -1.48
TPM1-221ENST00000559831 C9orf92A6NGG3 77 aa5.8□□□□□ -1.48
TPM1-221ENST00000559831 K7EQZ3 153 aa5.8□□□□□ -1.48
TPM1-221ENST00000559831 PRR15Q8IV56 129 aa5.79□□□□□ -1.48
TPM1-221ENST00000559831 HIST1H4AP62805 103 aaKnown RBP5.77□□□□□ -1.49
TPM1-221ENST00000559831 C8orf87E5RJ46 101 aa5.76□□□□□ -1.49
TPM1-221ENST00000559831 LORP23490 312 aaPredicted RBP5.76□□□□□ -1.49
TPM1-221ENST00000559831 LINC00313P59037 77 aa5.76□□□□□ -1.49
TPM1-221ENST00000559831 NOTCH2NLQ7Z3S9 236 aa5.76□□□□□ -1.49
TPM1-221ENST00000559831 C8orf17Q9NRJ1 99 aa5.76□□□□□ -1.49
TPM1-221ENST00000559831 MT-ATP8P03928 68 aa5.75□□□□□ -1.49
TPM1-221ENST00000559831 KRTAP13-3Q3SY46 172 aa5.75□□□□□ -1.49
TPM1-221ENST00000559831 MMP24-AS1A0A0U1RRL7 71 aa5.73□□□□□ -1.49
TPM1-221ENST00000559831 TPRXLQ17RH7 258 aa5.73□□□□□ -1.49
TPM1-221ENST00000559831 WFDC13Q8IUB5 93 aa5.73□□□□□ -1.49
TPM1-221ENST00000559831 A0A087WVE0 104 aa5.72□□□□□ -1.49
TPM1-221ENST00000559831 HCG22E2RYF7 251 aa5.71□□□□□ -1.5
TPM1-221ENST00000559831 hDV103S1A0JD37 113 aa5.7□□□□□ -1.5
TPM1-221ENST00000559831 CASC2Q6XLA1 102 aa5.7□□□□□ -1.5
TPM1-221ENST00000559831 TMEM254Q8TBM7 123 aa5.69□□□□□ -1.5
TPM1-221ENST00000559831 KRTAP16-1A8MUX0 517 aa5.68□□□□□ -1.5
TPM1-221ENST00000559831 XP32Q5T750 250 aa5.68□□□□□ -1.5
TPM1-221ENST00000559831 MRPL34Q9BQ48 92 aaKnown RBP5.68□□□□□ -1.5
TPM1-221ENST00000559831 IMUPQ9GZP8 106 aa5.67□□□□□ -1.5
TPM1-221ENST00000559831 NDUFS5O43920 106 aa5.66□□□□□ -1.5
TPM1-221ENST00000559831 LPAP08519 4548 aa5.65□□□□□ -1.5
TPM1-221ENST00000559831 C20orf166-AS1Q96NR2 134 aa5.64□□□□□ -1.51
TPM1-221ENST00000559831 A8MUU9 505 aa5.63□□□□□ -1.51
TPM1-221ENST00000559831 Q75L30 129 aa5.63□□□□□ -1.51
TPM1-221ENST00000559831 RPL37P61927 97 aaKnown RBP5.62□□□□□ -1.51
TPM1-221ENST00000559831 HMCN2Q8NDA2 5059 aa5.61□□□□□ -1.51
TPM1-221ENST00000559831 FAM236AA0A1B0GUQ0 79 aa5.61□□□□□ -1.51
TPM1-221ENST00000559831 FAM236BA0A1B0GV22 79 aa5.61□□□□□ -1.51
TPM1-221ENST00000559831 Q8N9P0 234 aaPredicted RBP5.61□□□□□ -1.51
TPM1-221ENST00000559831 SCGB1A1P11684 91 aa5.6□□□□□ -1.51
TPM1-221ENST00000559831 ATP11AUNQ6ZP68 121 aa5.58□□□□□ -1.52
TPM1-221ENST00000559831 PCOTHQ58A44 107 aa5.57□□□□□ -1.52
TPM1-221ENST00000559831 SEC61BP60468 96 aaKnown RBP5.56□□□□□ -1.52
TPM1-221ENST00000559831 ZCCHC13Q8WW36 166 aaKnown RBP5.56□□□□□ -1.52
TPM1-221ENST00000559831 LRP2P98164 4655 aa5.56□□□□□ -1.52
TPM1-221ENST00000559831 TP53AIP1Q9HCN2 124 aa5.55□□□□□ -1.52
TPM1-221ENST00000559831 UBR4Q5T4S7 5183 aa5.53□□□□□ -1.52
TPM1-221ENST00000559831 ATOX1O00244 68 aa5.53□□□□□ -1.52
TPM1-221ENST00000559831 UQCRQO14949 82 aa5.53□□□□□ -1.52
TPM1-221ENST00000559831 Q5W150 140 aa5.53□□□□□ -1.52
TPM1-221ENST00000559831 OCR1Q9BZK8 76 aa5.53□□□□□ -1.52
TPM1-221ENST00000559831 MUC17Q685J3 4493 aa5.5□□□□□ -1.53
TPM1-221ENST00000559831 SMIM20Q8N5G0 67 aa5.5□□□□□ -1.53
TPM1-221ENST00000559831 TRAV22A0A0B4J277 110 aa5.49□□□□□ -1.53
TPM1-221ENST00000559831 H0Y9P7 68 aa5.49□□□□□ -1.53
TPM1-221ENST00000559831 TRAV7A0A075B6U4 112 aa5.48□□□□□ -1.53
TPM1-221ENST00000559831 IGKV2D-30A0A075B6S6 120 aa5.47□□□□□ -1.53
TPM1-221ENST00000559831 IGKV2-30P06310 120 aa5.47□□□□□ -1.53
TPM1-221ENST00000559831 MP68P56378 58 aa5.46□□□□□ -1.54
TPM1-221ENST00000559831 C5orf47Q569G3 176 aa5.45□□□□□ -1.54
TPM1-221ENST00000559831 SERP2Q8N6R1 65 aa5.44□□□□□ -1.54
TPM1-221ENST00000559831 LINC00208Q96KT6 92 aa5.44□□□□□ -1.54
TPM1-221ENST00000559831 KRTAP4-1Q9BYQ7 146 aa5.44□□□□□ -1.54
TPM1-221ENST00000559831 SPINK7P58062 85 aa5.43□□□□□ -1.54
TPM1-221ENST00000559831 C7orf65Q6ZTY9 151 aa5.43□□□□□ -1.54
TPM1-221ENST00000559831 C1orf64Q8NEQ6 169 aa5.43□□□□□ -1.54
TPM1-221ENST00000559831 ANAPC13Q9BS18 74 aa5.43□□□□□ -1.54
TPM1-221ENST00000559831 LOC101927531A0A1B0GV80 90 aa5.41□□□□□ -1.54
TPM1-221ENST00000559831 H3BPC8 53 aa5.39□□□□□ -1.55
TPM1-221ENST00000559831 COX7CP15954 63 aa5.39□□□□□ -1.55
TPM1-221ENST00000559831 CYP4F30PQ9H0H9 118 aa5.39□□□□□ -1.55
TPM1-221ENST00000559831 C20orf197Q8N268 126 aa5.38□□□□□ -1.55
TPM1-221ENST00000559831 SNURFQ9Y675 71 aa5.38□□□□□ -1.55
TPM1-221ENST00000559831 A0A0U1RQV1 116 aa5.37□□□□□ -1.55
TPM1-221ENST00000559831 HRES1P13985 223 aa5.36□□□□□ -1.55
TPM1-221ENST00000559831 KLKP1Q107X0 134 aa5.34□□□□□ -1.55
TPM1-221ENST00000559831 RBM12B-AS1Q9P1G2 102 aa5.32□□□□□ -1.56
TPM1-221ENST00000559831 RNF213Q63HN8 5207 aa5.31□□□□□ -1.56
TPM1-221ENST00000559831 FAM236DA0A1B0GTK5 79 aa5.31□□□□□ -1.56
TPM1-221ENST00000559831 CCDC179H3BU77 68 aa5.31□□□□□ -1.56
TPM1-221ENST00000559831 FAM236CP0DP71 79 aa5.31□□□□□ -1.56
TPM1-221ENST00000559831 C4orf26Q17RF5 130 aa5.31□□□□□ -1.56
TPM1-221ENST00000559831 COX6B2Q6YFQ2 88 aa5.29□□□□□ -1.56
TPM1-221ENST00000559831 MPLKIPQ8TAP9 179 aa5.28□□□□□ -1.56
TPM1-221ENST00000559831 CYSTM1Q9H1C7 97 aa5.26□□□□□ -1.57
TPM1-221ENST00000559831 MUC2Q02817 5179 aa5.24□□□□□ -1.57
TPM1-221ENST00000559831 NDUFC1O43677 76 aa5.23□□□□□ -1.57
TPM1-221ENST00000559831 KRTAP19-2Q3LHN2 52 aa5.23□□□□□ -1.57
TPM1-221ENST00000559831 PCP4P48539 62 aa5.22□□□□□ -1.57
TPM1-221ENST00000559831 H3BS24 57 aa5.21□□□□□ -1.58
TPM1-221ENST00000559831 H7BZZ5 65 aa5.21□□□□□ -1.58
TPM1-221ENST00000559831 KRTAP3-1Q9BYR8 98 aa5.21□□□□□ -1.58
TPM1-221ENST00000559831 H1FX-AS1Q4G0G2 97 aa5.2□□□□□ -1.58
TPM1-221ENST00000559831 SPANXA2-OT1Q8N9U9 137 aa5.19□□□□□ -1.58
TPM1-221ENST00000559831 DMAC1Q96GE9 116 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 128.5 ms