RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 MTURNQ8N3F0 131 aa6.14□□□□□ -1.43
SPG11-219ENST00000559822 MPLKIPQ8TAP9 179 aa6.14□□□□□ -1.43
SPG11-219ENST00000559822 J3KT08 172 aa6.13□□□□□ -1.43
SPG11-219ENST00000559822 C9JAW5 83 aa6.11□□□□□ -1.43
SPG11-219ENST00000559822 NDUFB1O75438 58 aa6.1□□□□□ -1.43
SPG11-219ENST00000559822 MT2AP02795 61 aa6.09□□□□□ -1.43
SPG11-219ENST00000559822 BAALC-AS2P0C853 105 aa6.09□□□□□ -1.43
SPG11-219ENST00000559822 ZCCHC13Q8WW36 166 aaKnown RBP6.09□□□□□ -1.43
SPG11-219ENST00000559822 Q6ZQT0 140 aa6.07□□□□□ -1.44
SPG11-219ENST00000559822 A0A1B0GW54 56 aa6.06□□□□□ -1.44
SPG11-219ENST00000559822 JMJD7-PLA2G4BH0Y9G9 81 aa6.06□□□□□ -1.44
SPG11-219ENST00000559822 KRTAP10-10P60014 251 aa6.05□□□□□ -1.44
SPG11-219ENST00000559822 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.04□□□□□ -1.44
SPG11-219ENST00000559822 MT1FP04733 61 aa6.04□□□□□ -1.44
SPG11-219ENST00000559822 PDE6GP18545 87 aa6.04□□□□□ -1.44
SPG11-219ENST00000559822 SPINK7P58062 85 aa6.04□□□□□ -1.44
SPG11-219ENST00000559822 ATXN8Q156A1 80 aa6.04□□□□□ -1.44
SPG11-219ENST00000559822 Q8N9P0 234 aaPredicted RBP6.04□□□□□ -1.44
SPG11-219ENST00000559822 LYRM7Q5U5X0 104 aa6.03□□□□□ -1.44
SPG11-219ENST00000559822 TMA7Q9Y2S6 64 aaKnown RBP6.03□□□□□ -1.44
SPG11-219ENST00000559822 A8MWP4 228 aa6.02□□□□□ -1.45
SPG11-219ENST00000559822 M0R143 59 aa6.02□□□□□ -1.45
SPG11-219ENST00000559822 LOC110117498A0A087WWA1 95 aa6.01□□□□□ -1.45
SPG11-219ENST00000559822 KRTAP9-7A8MTY7 169 aa6.01□□□□□ -1.45
SPG11-219ENST00000559822 C8orf17Q9NRJ1 99 aa6.01□□□□□ -1.45
SPG11-219ENST00000559822 KRTAP9-3Q9BYQ3 159 aa6□□□□□ -1.45
SPG11-219ENST00000559822 USH2AO75445 5202 aa5.98□□□□□ -1.45
SPG11-219ENST00000559822 LCE2BO14633 110 aa5.98□□□□□ -1.45
SPG11-219ENST00000559822 WFDC13Q8IUB5 93 aa5.98□□□□□ -1.45
SPG11-219ENST00000559822 IGKV3D-7A0A0C4DH55 119 aa5.97□□□□□ -1.45
SPG11-219ENST00000559822 Q6ZVQ6 151 aa5.97□□□□□ -1.45
SPG11-219ENST00000559822 SSPOA2VEC9 5147 aa5.95□□□□□ -1.46
SPG11-219ENST00000559822 NREPQ16612 68 aa5.95□□□□□ -1.46
SPG11-219ENST00000559822 KRTAP19-1Q8IUB9 90 aa5.95□□□□□ -1.46
SPG11-219ENST00000559822 PRR15Q8IV56 129 aa5.95□□□□□ -1.46
SPG11-219ENST00000559822 NAA38Q9BRA0 125 aaKnown RBP5.95□□□□□ -1.46
SPG11-219ENST00000559822 C14orf132Q9NPU4 83 aa5.95□□□□□ -1.46
SPG11-219ENST00000559822 LINC00846Q9NV44 126 aa5.95□□□□□ -1.46
SPG11-219ENST00000559822 TMEM254Q8TBM7 123 aa5.93□□□□□ -1.46
SPG11-219ENST00000559822 MRPL34Q9BQ48 92 aaKnown RBP5.92□□□□□ -1.46
SPG11-219ENST00000559822 MMP24-AS1A0A0U1RRL7 71 aa5.89□□□□□ -1.47
SPG11-219ENST00000559822 hDV103S1A0JD37 113 aa5.88□□□□□ -1.47
SPG11-219ENST00000559822 NDUFS5O43920 106 aa5.88□□□□□ -1.47
SPG11-219ENST00000559822 SMIM6P0DI80 62 aa5.87□□□□□ -1.47
SPG11-219ENST00000559822 H1FX-AS1Q4G0G2 97 aa5.86□□□□□ -1.47
SPG11-219ENST00000559822 H3BT86 120 aa5.85□□□□□ -1.47
SPG11-219ENST00000559822 K7EQZ3 153 aa5.85□□□□□ -1.47
SPG11-219ENST00000559822 FCGBPQ9Y6R7 5405 aaPredicted RBP5.85□□□□□ -1.47
SPG11-219ENST00000559822 TSTD3H0UI37 97 aa5.84□□□□□ -1.47
SPG11-219ENST00000559822 BATFQ16520 125 aa5.84□□□□□ -1.47
SPG11-219ENST00000559822 BPY2O14599 106 aa5.83□□□□□ -1.48
SPG11-219ENST00000559822 KRTAP19-6Q3LI70 58 aa5.83□□□□□ -1.48
SPG11-219ENST00000559822 IGKV2D-30A0A075B6S6 120 aa5.82□□□□□ -1.48
SPG11-219ENST00000559822 IGKV2-30P06310 120 aa5.82□□□□□ -1.48
SPG11-219ENST00000559822 C7orf65Q6ZTY9 151 aa5.82□□□□□ -1.48
SPG11-219ENST00000559822 C9orf118A6NHY6 69 aa5.8□□□□□ -1.48
SPG11-219ENST00000559822 A0A1W2PPM0 123 aa5.78□□□□□ -1.48
SPG11-219ENST00000559822 CASC2Q6XLA1 102 aa5.77□□□□□ -1.49
SPG11-219ENST00000559822 HCG22E2RYF7 251 aa5.75□□□□□ -1.49
SPG11-219ENST00000559822 Q5W150 140 aa5.75□□□□□ -1.49
SPG11-219ENST00000559822 TAX1BP3O14907 124 aa5.74□□□□□ -1.49
SPG11-219ENST00000559822 CXCL6P80162 114 aa5.74□□□□□ -1.49
SPG11-219ENST00000559822 Q8N9L7 120 aa5.72□□□□□ -1.49
SPG11-219ENST00000559822 C4orf26Q17RF5 130 aa5.71□□□□□ -1.5
SPG11-219ENST00000559822 SPCS1Q9Y6A9 102 aa5.7□□□□□ -1.5
SPG11-219ENST00000559822 UBL5Q9BZL1 73 aa5.69□□□□□ -1.5
SPG11-219ENST00000559822 FAM236AA0A1B0GUQ0 79 aa5.66□□□□□ -1.5
SPG11-219ENST00000559822 FAM236BA0A1B0GV22 79 aa5.66□□□□□ -1.5
SPG11-219ENST00000559822 MACF1Q9UPN3 7388 aaKnown RBP5.66□□□□□ -1.5
SPG11-219ENST00000559822 C5orf47Q569G3 176 aa5.64□□□□□ -1.51
SPG11-219ENST00000559822 SMCPP49901 116 aaPredicted RBP5.63□□□□□ -1.51
SPG11-219ENST00000559822 KRTAP6-3Q3LI67 103 aa5.63□□□□□ -1.51
SPG11-219ENST00000559822 S4R3F8 94 aa5.63□□□□□ -1.51
SPG11-219ENST00000559822 CSAG1Q6PB30 78 aa5.62□□□□□ -1.51
SPG11-219ENST00000559822 TP53AIP1Q9HCN2 124 aa5.61□□□□□ -1.51
SPG11-219ENST00000559822 C1orf64Q8NEQ6 169 aa5.6□□□□□ -1.51
SPG11-219ENST00000559822 LOC105371267A0A1B0GV96 52 aa5.58□□□□□ -1.52
SPG11-219ENST00000559822 COL5A1-AS1Q5SY13 56 aa5.58□□□□□ -1.52
SPG11-219ENST00000559822 KRTAP3-1Q9BYR8 98 aa5.58□□□□□ -1.52
SPG11-219ENST00000559822 PRO0461Q9UI25 63 aa5.57□□□□□ -1.52
SPG11-219ENST00000559822 K7EP34 96 aa5.56□□□□□ -1.52
SPG11-219ENST00000559822 Q5VV11 94 aa5.56□□□□□ -1.52
SPG11-219ENST00000559822 LCA10Q71F78 164 aa5.56□□□□□ -1.52
SPG11-219ENST00000559822 A6NN06 94 aa5.55□□□□□ -1.52
SPG11-219ENST00000559822 SYNE2Q8WXH0 6885 aaKnown RBP5.55□□□□□ -1.52
SPG11-219ENST00000559822 SPRR2GQ9BYE4 73 aa5.54□□□□□ -1.52
SPG11-219ENST00000559822 MT1BP07438 61 aa5.51□□□□□ -1.53
SPG11-219ENST00000559822 KRTAP19-8Q3LI54 63 aa5.51□□□□□ -1.53
SPG11-219ENST00000559822 GTF2H5Q6ZYL4 71 aa5.51□□□□□ -1.53
SPG11-219ENST00000559822 KLKP1Q107X0 134 aa5.5□□□□□ -1.53
SPG11-219ENST00000559822 F8W1H4 67 aa5.48□□□□□ -1.53
SPG11-219ENST00000559822 CYP4F30PQ9H0H9 118 aa5.48□□□□□ -1.53
SPG11-219ENST00000559822 TRAV22A0A0B4J277 110 aa5.46□□□□□ -1.54
SPG11-219ENST00000559822 LOC101927531A0A1B0GV80 90 aa5.45□□□□□ -1.54
SPG11-219ENST00000559822 CRIPTQ9P021 101 aa5.45□□□□□ -1.54
SPG11-219ENST00000559822 KRTAP10-5P60370 271 aa5.44□□□□□ -1.54
SPG11-219ENST00000559822 ETDBQ3ZM63 59 aa5.44□□□□□ -1.54
SPG11-219ENST00000559822 KRTAP3-3Q9BYR6 98 aa5.44□□□□□ -1.54
SPG11-219ENST00000559822 IMUPQ9GZP8 106 aa5.41□□□□□ -1.54
SPG11-219ENST00000559822 ACYP1P07311 99 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms