RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 LINC00313P59037 77 aa3.09□□□□□ -1.91
HMG20A-204ENST00000558288 C1orf134Q5TEV5 83 aa3.09□□□□□ -1.92
HMG20A-204ENST00000558288 BIRC6Q9NR09 4857 aa3.09□□□□□ -1.92
HMG20A-204ENST00000558288 C8orf87E5RJ46 101 aa3.08□□□□□ -1.92
HMG20A-204ENST00000558288 PLAC8Q9NZF1 115 aa3.08□□□□□ -1.92
HMG20A-204ENST00000558288 RYR2Q92736 4967 aa3.08□□□□□ -1.92
HMG20A-204ENST00000558288 SPRR1BP22528 89 aa3.07□□□□□ -1.92
HMG20A-204ENST00000558288 SACSQ9NZJ4 4579 aa3.07□□□□□ -1.92
HMG20A-204ENST00000558288 DMBT1Q9UGM3 2413 aaPredicted RBP3.07□□□□□ -1.92
HMG20A-204ENST00000558288 FLG2Q5D862 2391 aaPredicted RBP3.07□□□□□ -1.92
HMG20A-204ENST00000558288 Q6ZR54 194 aa3.07□□□□□ -1.92
HMG20A-204ENST00000558288 MRPL34Q9BQ48 92 aaKnown RBP3.07□□□□□ -1.92
HMG20A-204ENST00000558288 STARD9Q9P2P6 4700 aa3.07□□□□□ -1.92
HMG20A-204ENST00000558288 SPINK6Q6UWN8 80 aa3.07□□□□□ -1.92
HMG20A-204ENST00000558288 ADM2Q7Z4H4 148 aa3.07□□□□□ -1.92
HMG20A-204ENST00000558288 A0A1B0GVX0 72 aa3.06□□□□□ -1.92
HMG20A-204ENST00000558288 APLNQ9ULZ1 77 aa3.06□□□□□ -1.92
HMG20A-204ENST00000558288 Q96NJ1 140 aa3.06□□□□□ -1.92
HMG20A-204ENST00000558288 DNAH3Q8TD57 4116 aa3.05□□□□□ -1.92
HMG20A-204ENST00000558288 A0A087X002 238 aa3.05□□□□□ -1.92
HMG20A-204ENST00000558288 A0A1B0GU69 56 aa3.05□□□□□ -1.92
HMG20A-204ENST00000558288 ACYP2P14621 99 aa3.05□□□□□ -1.92
HMG20A-204ENST00000558288 NOTCH2NLQ7Z3S9 236 aa3.05□□□□□ -1.92
HMG20A-204ENST00000558288 KRTAP1-5Q9BYS1 174 aa3.05□□□□□ -1.92
HMG20A-204ENST00000558288 ASB16-AS1Q495Z4 193 aa3.04□□□□□ -1.92
HMG20A-204ENST00000558288 RETNLBQ9BQ08 111 aa3.04□□□□□ -1.92
HMG20A-204ENST00000558288 ANAPC11Q9NYG5 84 aa3.04□□□□□ -1.92
HMG20A-204ENST00000558288 SMR3BP02814 79 aaPredicted RBP3.03□□□□□ -1.92
HMG20A-204ENST00000558288 KIAA1109Q2LD37 5005 aa3.03□□□□□ -1.92
HMG20A-204ENST00000558288 C14orf177Q52M58 125 aa3.03□□□□□ -1.92
HMG20A-204ENST00000558288 LINC01554Q52M75 96 aa3.03□□□□□ -1.92
HMG20A-204ENST00000558288 PLECQ15149 4684 aaKnown RBP3.02□□□□□ -1.93
HMG20A-204ENST00000558288 LOC100996750A0A140TA64 210 aa3.02□□□□□ -1.93
HMG20A-204ENST00000558288 RTL8CO15255 209 aa3.02□□□□□ -1.93
HMG20A-204ENST00000558288 LCE2AQ5TA79 106 aaPredicted RBP3.02□□□□□ -1.93
HMG20A-204ENST00000558288 Q5W150 140 aa3.02□□□□□ -1.93
HMG20A-204ENST00000558288 KRTAP4-6Q9BYQ5 205 aa3.02□□□□□ -1.93
HMG20A-204ENST00000558288 RYR1P21817 5038 aa3.02□□□□□ -1.93
HMG20A-204ENST00000558288 PANO1I0J062 215 aa3.02□□□□□ -1.93
HMG20A-204ENST00000558288 NBDYA0A0U1RRE5 68 aa3.01□□□□□ -1.93
HMG20A-204ENST00000558288 J3QL48 77 aa3.01□□□□□ -1.93
HMG20A-204ENST00000558288 PLA2G1BP04054 148 aaKnown RBP3.01□□□□□ -1.93
HMG20A-204ENST00000558288 MIR22HGQ0VDD5 57 aa3.01□□□□□ -1.93
HMG20A-204ENST00000558288 H3BS24 57 aa3□□□□□ -1.93
HMG20A-204ENST00000558288 ZNF706Q9Y5V0 76 aaPredicted RBP3□□□□□ -1.93
HMG20A-204ENST00000558288 DYNC2H1Q8NCM8 4307 aaKnown RBP3□□□□□ -1.93
HMG20A-204ENST00000558288 KRTAP13-1Q8IUC0 172 aa3□□□□□ -1.93
HMG20A-204ENST00000558288 DNAH1Q9P2D7 4330 aa2.99□□□□□ -1.93
HMG20A-204ENST00000558288 CIRBP-AS1Q8TBR5 109 aa2.99□□□□□ -1.93
HMG20A-204ENST00000558288 UQCR11O14957 56 aa2.99□□□□□ -1.93
HMG20A-204ENST00000558288 LYSTQ99698 3801 aa2.99□□□□□ -1.93
HMG20A-204ENST00000558288 FRAS1Q86XX4 4008 aa2.99□□□□□ -1.93
HMG20A-204ENST00000558288 KRTAP4-5Q9BYR2 181 aa2.99□□□□□ -1.93
HMG20A-204ENST00000558288 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.98□□□□□ -1.93
HMG20A-204ENST00000558288 CSAG1Q6PB30 78 aa2.98□□□□□ -1.93
HMG20A-204ENST00000558288 SPATA8Q6RVD6 105 aa2.98□□□□□ -1.93
HMG20A-204ENST00000558288 DMAC1Q96GE9 116 aa2.98□□□□□ -1.93
HMG20A-204ENST00000558288 DNAH7Q8WXX0 4024 aa2.97□□□□□ -1.93
HMG20A-204ENST00000558288 FAM229AH3BQW9 127 aa2.97□□□□□ -1.93
HMG20A-204ENST00000558288 KMT2AQ03164 3969 aa2.97□□□□□ -1.93
HMG20A-204ENST00000558288 LINC00483Q53H64 154 aa2.97□□□□□ -1.93
HMG20A-204ENST00000558288 KRTAP10-2P60368 255 aa2.96□□□□□ -1.93
HMG20A-204ENST00000558288 PSORS1C2Q9UIG4 136 aa2.96□□□□□ -1.93
HMG20A-204ENST00000558288 IGLV5-52A0A0A0MRZ9 124 aa2.96□□□□□ -1.94
HMG20A-204ENST00000558288 PCLOQ9Y6V0 5065 aa2.96□□□□□ -1.94
HMG20A-204ENST00000558288 IGKV2D-30A0A075B6S6 120 aa2.95□□□□□ -1.94
HMG20A-204ENST00000558288 SPINK1P00995 79 aa2.95□□□□□ -1.94
HMG20A-204ENST00000558288 IGKV2-30P06310 120 aa2.95□□□□□ -1.94
HMG20A-204ENST00000558288 KRTAP13-3Q3SY46 172 aa2.95□□□□□ -1.94
HMG20A-204ENST00000558288 Q5VSD8 79 aa2.95□□□□□ -1.94
HMG20A-204ENST00000558288 SPACA4Q8TDM5 124 aa2.95□□□□□ -1.94
HMG20A-204ENST00000558288 DNAH10Q8IVF4 4471 aa2.95□□□□□ -1.94
HMG20A-204ENST00000558288 ZNF861PO60384 105 aa2.94□□□□□ -1.94
HMG20A-204ENST00000558288 Q8N1X5 172 aa2.94□□□□□ -1.94
HMG20A-204ENST00000558288 ALMS1Q8TCU4 4167 aa2.94□□□□□ -1.94
HMG20A-204ENST00000558288 A0A1B0GVY2 172 aa2.94□□□□□ -1.94
HMG20A-204ENST00000558288 HERC2O95714 4834 aa2.93□□□□□ -1.94
HMG20A-204ENST00000558288 LCE2CQ5TA81 110 aa2.91□□□□□ -1.94
HMG20A-204ENST00000558288 A0A087WTM6 91 aa2.91□□□□□ -1.94
HMG20A-204ENST00000558288 PKHD1P08F94 4074 aa2.9□□□□□ -1.94
HMG20A-204ENST00000558288 KRTAP10-1P60331 282 aa2.9□□□□□ -1.94
HMG20A-204ENST00000558288 XP32Q5T750 250 aa2.9□□□□□ -1.95
HMG20A-204ENST00000558288 ABCA13Q86UQ4 5058 aa2.89□□□□□ -1.95
HMG20A-204ENST00000558288 Q6ZRN7 208 aaPredicted RBP2.89□□□□□ -1.95
HMG20A-204ENST00000558288 VPS13DQ5THJ4 4388 aa2.89□□□□□ -1.95
HMG20A-204ENST00000558288 IGLV7-43P04211 117 aa2.89□□□□□ -1.95
HMG20A-204ENST00000558288 SSBP3-AS1Q7Z2R9 100 aa2.88□□□□□ -1.95
HMG20A-204ENST00000558288 DYNC1H1Q14204 4646 aaKnown RBP2.86□□□□□ -1.95
HMG20A-204ENST00000558288 HERC1Q15751 4861 aa2.86□□□□□ -1.95
HMG20A-204ENST00000558288 DNAH5Q8TE73 4624 aa2.86□□□□□ -1.95
HMG20A-204ENST00000558288 DNAH11Q96DT5 4516 aa2.85□□□□□ -1.95
HMG20A-204ENST00000558288 LORP23490 312 aaPredicted RBP2.85□□□□□ -1.95
HMG20A-204ENST00000558288 CRIPTQ9P021 101 aa2.85□□□□□ -1.95
HMG20A-204ENST00000558288 DNAH2Q9P225 4427 aa2.85□□□□□ -1.95
HMG20A-204ENST00000558288 KRTAP25-1Q3LHN0 102 aa2.85□□□□□ -1.95
HMG20A-204ENST00000558288 HECTD4Q9Y4D8 3996 aa2.84□□□□□ -1.95
HMG20A-204ENST00000558288 KRTAP16-1A8MUX0 517 aa2.84□□□□□ -1.95
HMG20A-204ENST00000558288 FAT1Q14517 4588 aa2.83□□□□□ -1.96
HMG20A-204ENST00000558288 A8MUU9 505 aa2.83□□□□□ -1.96
HMG20A-204ENST00000558288 H0YAA0 97 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 141.5 ms