RNA–Protein interactions for RNA: ENST00000557201.5

HNRNPC-230, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-230ENST00000557201 TRBV7-7A0A0K0K1E9 115 aa5.88□□□□□ -1.47
HNRNPC-230ENST00000557201 H3BT86 120 aa5.88□□□□□ -1.47
HNRNPC-230ENST00000557201 RBM3P98179 157 aaKnown RBP5.88□□□□□ -1.47
HNRNPC-230ENST00000557201 TEN1Q86WV5 123 aa5.88□□□□□ -1.47
HNRNPC-230ENST00000557201 TRBV7-4A0A0J9YYF1 115 aa5.87□□□□□ -1.47
HNRNPC-230ENST00000557201 JMJD7-PLA2G4BH0Y9G9 81 aa5.87□□□□□ -1.47
HNRNPC-230ENST00000557201 K7EP34 96 aa5.87□□□□□ -1.47
HNRNPC-230ENST00000557201 GTF2H5Q6ZYL4 71 aa5.86□□□□□ -1.47
HNRNPC-230ENST00000557201 OBSCN-AS1Q96MR7 158 aa5.86□□□□□ -1.47
HNRNPC-230ENST00000557201 DSCR8Q96T75 97 aa5.86□□□□□ -1.47
HNRNPC-230ENST00000557201 A0A1W2PNM2 257 aa5.85□□□□□ -1.47
HNRNPC-230ENST00000557201 MT1HP80294 61 aa5.85□□□□□ -1.47
HNRNPC-230ENST00000557201 CCKP06307 115 aa5.83□□□□□ -1.48
HNRNPC-230ENST00000557201 PDE6GP18545 87 aa5.83□□□□□ -1.48
HNRNPC-230ENST00000557201 SIGMAR1Q99720 223 aa5.83□□□□□ -1.48
HNRNPC-230ENST00000557201 PRO0461Q9UI25 63 aa5.83□□□□□ -1.48
HNRNPC-230ENST00000557201 LOC110117498A0A087WWA1 95 aa5.82□□□□□ -1.48
HNRNPC-230ENST00000557201 J3QR89 54 aa5.82□□□□□ -1.48
HNRNPC-230ENST00000557201 C1orf195Q5TG92 126 aa5.82□□□□□ -1.48
HNRNPC-230ENST00000557201 SS18L2Q9UHA2 77 aa5.82□□□□□ -1.48
HNRNPC-230ENST00000557201 A0A087WSZ3 146 aa5.8□□□□□ -1.48
HNRNPC-230ENST00000557201 A0A1B0GW54 56 aa5.8□□□□□ -1.48
HNRNPC-230ENST00000557201 PCOTHQ58A44 107 aa5.8□□□□□ -1.48
HNRNPC-230ENST00000557201 Q6ZQT0 140 aa5.8□□□□□ -1.48
HNRNPC-230ENST00000557201 F8W1H4 67 aa5.8□□□□□ -1.48
HNRNPC-230ENST00000557201 C14orf132Q9NPU4 83 aa5.8□□□□□ -1.48
HNRNPC-230ENST00000557201 KRTAP10-6P60371 365 aaPredicted RBP5.77□□□□□ -1.49
HNRNPC-230ENST00000557201 KRTAP4-9Q9BYQ8 210 aa5.77□□□□□ -1.49
HNRNPC-230ENST00000557201 C9orf92A6NGG3 77 aa5.76□□□□□ -1.49
HNRNPC-230ENST00000557201 FLGP20930 4061 aaPredicted RBP5.75□□□□□ -1.49
HNRNPC-230ENST00000557201 Q96NJ1 140 aa5.75□□□□□ -1.49
HNRNPC-230ENST00000557201 LINC00472Q9H8W2 130 aa5.73□□□□□ -1.49
HNRNPC-230ENST00000557201 ETDBQ3ZM63 59 aa5.71□□□□□ -1.5
HNRNPC-230ENST00000557201 RPL37P61927 97 aaKnown RBP5.68□□□□□ -1.5
HNRNPC-230ENST00000557201 J3KT08 172 aa5.67□□□□□ -1.5
HNRNPC-230ENST00000557201 IGKV4-1P06312 121 aa5.67□□□□□ -1.5
HNRNPC-230ENST00000557201 KRTAP4-2Q9BYR5 136 aa5.67□□□□□ -1.5
HNRNPC-230ENST00000557201 NREPQ16612 68 aa5.67□□□□□ -1.5
HNRNPC-230ENST00000557201 DEFB116Q30KQ4 102 aa5.67□□□□□ -1.5
HNRNPC-230ENST00000557201 LCE4AQ5TA78 99 aa5.67□□□□□ -1.5
HNRNPC-230ENST00000557201 KRTAP3-1Q9BYR8 98 aa5.66□□□□□ -1.5
HNRNPC-230ENST00000557201 M0R2T5 61 aa5.64□□□□□ -1.51
HNRNPC-230ENST00000557201 KRTAP23-1A1A580 65 aa5.62□□□□□ -1.51
HNRNPC-230ENST00000557201 KRTAP9-7A8MTY7 169 aa5.62□□□□□ -1.51
HNRNPC-230ENST00000557201 C5orf47Q569G3 176 aa5.62□□□□□ -1.51
HNRNPC-230ENST00000557201 COX6B2Q6YFQ2 88 aa5.62□□□□□ -1.51
HNRNPC-230ENST00000557201 Q6ZVQ6 151 aa5.62□□□□□ -1.51
HNRNPC-230ENST00000557201 LINC00846Q9NV44 126 aa5.62□□□□□ -1.51
HNRNPC-230ENST00000557201 A0A1B0GVX0 72 aa5.61□□□□□ -1.51
HNRNPC-230ENST00000557201 A8MWP4 228 aa5.61□□□□□ -1.51
HNRNPC-230ENST00000557201 NDUFB1O75438 58 aa5.61□□□□□ -1.51
HNRNPC-230ENST00000557201 LINC00313P59037 77 aa5.61□□□□□ -1.51
HNRNPC-230ENST00000557201 ANAPC13Q9BS18 74 aa5.61□□□□□ -1.51
HNRNPC-230ENST00000557201 UBL5Q9BZL1 73 aa5.6□□□□□ -1.51
HNRNPC-230ENST00000557201 IGHV6-1A0A0B4J1U7 121 aa5.59□□□□□ -1.51
HNRNPC-230ENST00000557201 FAM240AA0A1B0GVK7 77 aa5.59□□□□□ -1.51
HNRNPC-230ENST00000557201 C8orf87E5RJ46 101 aa5.59□□□□□ -1.51
HNRNPC-230ENST00000557201 ACYP1P07311 99 aa5.59□□□□□ -1.51
HNRNPC-230ENST00000557201 IGKV3D-7A0A0C4DH55 119 aa5.58□□□□□ -1.52
HNRNPC-230ENST00000557201 BPY2O14599 106 aa5.58□□□□□ -1.52
HNRNPC-230ENST00000557201 DSCR10P59022 87 aa5.58□□□□□ -1.52
HNRNPC-230ENST00000557201 Q75L30 129 aa5.58□□□□□ -1.52
HNRNPC-230ENST00000557201 NOTCH2NLQ7Z3S9 236 aa5.58□□□□□ -1.52
HNRNPC-230ENST00000557201 PRR15Q8IV56 129 aa5.57□□□□□ -1.52
HNRNPC-230ENST00000557201 C20orf166-AS1Q96NR2 134 aa5.57□□□□□ -1.52
HNRNPC-230ENST00000557201 KRTAP16-1A8MUX0 517 aa5.56□□□□□ -1.52
HNRNPC-230ENST00000557201 SMIM20Q8N5G0 67 aa5.56□□□□□ -1.52
HNRNPC-230ENST00000557201 A8MUU9 505 aa5.55□□□□□ -1.52
HNRNPC-230ENST00000557201 K7EQZ3 153 aa5.54□□□□□ -1.52
HNRNPC-230ENST00000557201 KRTAP4-11Q9BYQ6 195 aa5.54□□□□□ -1.52
HNRNPC-230ENST00000557201 C8orf17Q9NRJ1 99 aa5.54□□□□□ -1.52
HNRNPC-230ENST00000557201 CXCL6P80162 114 aa5.53□□□□□ -1.52
HNRNPC-230ENST00000557201 KRTAP9-8Q9BYQ0 159 aa5.53□□□□□ -1.52
HNRNPC-230ENST00000557201 SSPOA2VEC9 5147 aa5.52□□□□□ -1.52
HNRNPC-230ENST00000557201 ATP11AUNQ6ZP68 121 aa5.52□□□□□ -1.53
HNRNPC-230ENST00000557201 USH2AO75445 5202 aa5.52□□□□□ -1.53
HNRNPC-230ENST00000557201 MMP24-AS1A0A0U1RRL7 71 aa5.5□□□□□ -1.53
HNRNPC-230ENST00000557201 MT-ATP8P03928 68 aa5.5□□□□□ -1.53
HNRNPC-230ENST00000557201 Q8N9L7 120 aa5.5□□□□□ -1.53
HNRNPC-230ENST00000557201 Q8N9P0 234 aaPredicted RBP5.5□□□□□ -1.53
HNRNPC-230ENST00000557201 hDV103S1A0JD37 113 aa5.48□□□□□ -1.53
HNRNPC-230ENST00000557201 ATP5EP2Q5VTU8 51 aa5.48□□□□□ -1.53
HNRNPC-230ENST00000557201 TMEM254Q8TBM7 123 aa5.48□□□□□ -1.53
HNRNPC-230ENST00000557201 RPS28P62857 69 aaKnown RBP5.47□□□□□ -1.53
HNRNPC-230ENST00000557201 LINC00643Q86TS7 51 aa5.46□□□□□ -1.54
HNRNPC-230ENST00000557201 MRPL34Q9BQ48 92 aaKnown RBP5.46□□□□□ -1.54
HNRNPC-230ENST00000557201 CASC2Q6XLA1 102 aa5.44□□□□□ -1.54
HNRNPC-230ENST00000557201 HCG22E2RYF7 251 aa5.43□□□□□ -1.54
HNRNPC-230ENST00000557201 CCDC179H3BU77 68 aa5.43□□□□□ -1.54
HNRNPC-230ENST00000557201 ZCCHC13Q8WW36 166 aaKnown RBP5.42□□□□□ -1.54
HNRNPC-230ENST00000557201 FCGBPQ9Y6R7 5405 aaPredicted RBP5.42□□□□□ -1.54
HNRNPC-230ENST00000557201 WFDC13Q8IUB5 93 aa5.42□□□□□ -1.54
HNRNPC-230ENST00000557201 IMUPQ9GZP8 106 aa5.42□□□□□ -1.54
HNRNPC-230ENST00000557201 MT2AP02795 61 aa5.41□□□□□ -1.54
HNRNPC-230ENST00000557201 KRTAP9-3Q9BYQ3 159 aa5.41□□□□□ -1.54
HNRNPC-230ENST00000557201 UQCRQO14949 82 aa5.38□□□□□ -1.55
HNRNPC-230ENST00000557201 NDUFS5O43920 106 aa5.38□□□□□ -1.55
HNRNPC-230ENST00000557201 MT1FP04733 61 aa5.37□□□□□ -1.55
HNRNPC-230ENST00000557201 HIST1H4AP62805 103 aaKnown RBP5.37□□□□□ -1.55
HNRNPC-230ENST00000557201 LCE5AQ5TCM9 118 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 589.3 ms