RNA–Protein interactions for RNA: ENST00000556980.5

XRCC3-217, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-217ENST00000556980 A0A1B0GVX0 72 aa9.29□□□□□ -0.92
XRCC3-217ENST00000556980 J3KT08 172 aa9.29□□□□□ -0.92
XRCC3-217ENST00000556980 C8orf87E5RJ46 101 aa9.28□□□□□ -0.92
XRCC3-217ENST00000556980 PDE6GP18545 87 aa9.28□□□□□ -0.92
XRCC3-217ENST00000556980 C14orf132Q9NPU4 83 aa9.27□□□□□ -0.93
XRCC3-217ENST00000556980 A0A1B0GW54 56 aa9.25□□□□□ -0.93
XRCC3-217ENST00000556980 C9orf118A6NHY6 69 aa9.24□□□□□ -0.93
XRCC3-217ENST00000556980 NDUFB1O75438 58 aa9.22□□□□□ -0.93
XRCC3-217ENST00000556980 KRTAP10-6P60371 365 aaPredicted RBP9.22□□□□□ -0.93
XRCC3-217ENST00000556980 LCE2DQ5TA82 110 aaPredicted RBP9.22□□□□□ -0.93
XRCC3-217ENST00000556980 A0A1W2PPM0 123 aa9.21□□□□□ -0.94
XRCC3-217ENST00000556980 TAX1BP3O14907 124 aa9.21□□□□□ -0.94
XRCC3-217ENST00000556980 LORP23490 312 aaPredicted RBP9.2□□□□□ -0.94
XRCC3-217ENST00000556980 H3BT86 120 aa9.18□□□□□ -0.94
XRCC3-217ENST00000556980 A8MWP4 228 aa9.17□□□□□ -0.94
XRCC3-217ENST00000556980 MTURNQ8N3F0 131 aa9.16□□□□□ -0.94
XRCC3-217ENST00000556980 NREPQ16612 68 aa9.14□□□□□ -0.95
XRCC3-217ENST00000556980 KRTAP9-6A0A140TA67 174 aa9.13□□□□□ -0.95
XRCC3-217ENST00000556980 IGKV3D-7A0A0C4DH55 119 aa9.12□□□□□ -0.95
XRCC3-217ENST00000556980 C8orf17Q9NRJ1 99 aa9.12□□□□□ -0.95
XRCC3-217ENST00000556980 FAM236DA0A1B0GTK5 79 aa9.11□□□□□ -0.95
XRCC3-217ENST00000556980 FAM236CP0DP71 79 aa9.11□□□□□ -0.95
XRCC3-217ENST00000556980 ZCCHC13Q8WW36 166 aaKnown RBP9.11□□□□□ -0.95
XRCC3-217ENST00000556980 RBM12B-AS1Q9P1G2 102 aa9.1□□□□□ -0.95
XRCC3-217ENST00000556980 SPCS1Q9Y6A9 102 aa9.1□□□□□ -0.95
XRCC3-217ENST00000556980 FLGP20930 4061 aaPredicted RBP9.1□□□□□ -0.95
XRCC3-217ENST00000556980 Q8N9P0 234 aaPredicted RBP9.09□□□□□ -0.95
XRCC3-217ENST00000556980 HRES1P13985 223 aa9.07□□□□□ -0.96
XRCC3-217ENST00000556980 PRR15Q8IV56 129 aa9.07□□□□□ -0.96
XRCC3-217ENST00000556980 FSIP2Q5CZC0 6907 aa9.06□□□□□ -0.96
XRCC3-217ENST00000556980 Q6ZVQ6 151 aa9.06□□□□□ -0.96
XRCC3-217ENST00000556980 COL5A1-AS1Q5SY13 56 aa9.05□□□□□ -0.96
XRCC3-217ENST00000556980 MPLKIPQ8TAP9 179 aa9.04□□□□□ -0.96
XRCC3-217ENST00000556980 SPINK7P58062 85 aa9.02□□□□□ -0.97
XRCC3-217ENST00000556980 MMP24-AS1A0A0U1RRL7 71 aa9□□□□□ -0.97
XRCC3-217ENST00000556980 K7EQZ3 153 aa9□□□□□ -0.97
XRCC3-217ENST00000556980 BPY2O14599 106 aa8.99□□□□□ -0.97
XRCC3-217ENST00000556980 TMEM254Q8TBM7 123 aa8.99□□□□□ -0.97
XRCC3-217ENST00000556980 SMCPP49901 116 aaPredicted RBP8.98□□□□□ -0.97
XRCC3-217ENST00000556980 MRPL34Q9BQ48 92 aaKnown RBP8.98□□□□□ -0.97
XRCC3-217ENST00000556980 CRCT1Q9UGL9 99 aa8.96□□□□□ -0.98
XRCC3-217ENST00000556980 hDV103S1A0JD37 113 aa8.95□□□□□ -0.98
XRCC3-217ENST00000556980 K7EP34 96 aa8.95□□□□□ -0.98
XRCC3-217ENST00000556980 NDUFS5O43920 106 aa8.93□□□□□ -0.98
XRCC3-217ENST00000556980 PRO0461Q9UI25 63 aa8.92□□□□□ -0.98
XRCC3-217ENST00000556980 WFDC13Q8IUB5 93 aa8.9□□□□□ -0.98
XRCC3-217ENST00000556980 KRTAP9-8Q9BYQ0 159 aa8.9□□□□□ -0.98
XRCC3-217ENST00000556980 Q8N9L7 120 aa8.88□□□□□ -0.99
XRCC3-217ENST00000556980 PCP4L1A6NKN8 68 aa8.87□□□□□ -0.99
XRCC3-217ENST00000556980 GTF2H5Q6ZYL4 71 aa8.86□□□□□ -0.99
XRCC3-217ENST00000556980 UBL5Q9BZL1 73 aa8.86□□□□□ -0.99
XRCC3-217ENST00000556980 CASC2Q6XLA1 102 aa8.85□□□□□ -0.99
XRCC3-217ENST00000556980 LINC00846Q9NV44 126 aa8.85□□□□□ -0.99
XRCC3-217ENST00000556980 MT2AP02795 61 aa8.81□□□□□ -1
XRCC3-217ENST00000556980 HCG22E2RYF7 251 aa8.79□□□□□ -1
XRCC3-217ENST00000556980 IGKV2D-30A0A075B6S6 120 aa8.78□□□□□ -1
XRCC3-217ENST00000556980 F8W1H4 67 aa8.78□□□□□ -1
XRCC3-217ENST00000556980 IGKV2-30P06310 120 aa8.78□□□□□ -1
XRCC3-217ENST00000556980 Q5W150 140 aa8.77□□□□□ -1.01
XRCC3-217ENST00000556980 C7orf65Q6ZTY9 151 aa8.75□□□□□ -1.01
XRCC3-217ENST00000556980 MT1FP04733 61 aa8.74□□□□□ -1.01
XRCC3-217ENST00000556980 KRTAP10-10P60014 251 aa8.73□□□□□ -1.01
XRCC3-217ENST00000556980 CXCL6P80162 114 aa8.73□□□□□ -1.01
XRCC3-217ENST00000556980 ETDBQ3ZM63 59 aa8.73□□□□□ -1.01
XRCC3-217ENST00000556980 H1FX-AS1Q4G0G2 97 aa8.69□□□□□ -1.02
XRCC3-217ENST00000556980 KRTAP9-3Q9BYQ3 159 aa8.62□□□□□ -1.03
XRCC3-217ENST00000556980 C4orf26Q17RF5 130 aa8.61□□□□□ -1.03
XRCC3-217ENST00000556980 USH2AO75445 5202 aa8.58□□□□□ -1.04
XRCC3-217ENST00000556980 TP53AIP1Q9HCN2 124 aa8.58□□□□□ -1.04
XRCC3-217ENST00000556980 LCE2BO14633 110 aa8.56□□□□□ -1.04
XRCC3-217ENST00000556980 ACYP1P07311 99 aa8.55□□□□□ -1.04
XRCC3-217ENST00000556980 FAM240AA0A1B0GVK7 77 aa8.51□□□□□ -1.05
XRCC3-217ENST00000556980 SSPOA2VEC9 5147 aa8.5□□□□□ -1.05
XRCC3-217ENST00000556980 ATP5EP2Q5VTU8 51 aa8.49□□□□□ -1.05
XRCC3-217ENST00000556980 C1orf64Q8NEQ6 169 aa8.45□□□□□ -1.06
XRCC3-217ENST00000556980 HIST1H4AP62805 103 aaKnown RBP8.44□□□□□ -1.06
XRCC3-217ENST00000556980 KRTAP3-1Q9BYR8 98 aa8.43□□□□□ -1.06
XRCC3-217ENST00000556980 C5orf47Q569G3 176 aa8.42□□□□□ -1.06
XRCC3-217ENST00000556980 S4R3F8 94 aa8.42□□□□□ -1.06
XRCC3-217ENST00000556980 TRAV22A0A0B4J277 110 aa8.41□□□□□ -1.06
XRCC3-217ENST00000556980 KRTAP19-1Q8IUB9 90 aa8.41□□□□□ -1.06
XRCC3-217ENST00000556980 CYP4F30PQ9H0H9 118 aa8.38□□□□□ -1.07
XRCC3-217ENST00000556980 LOC101927531A0A1B0GV80 90 aa8.36□□□□□ -1.07
XRCC3-217ENST00000556980 A0A1B0GV90 55 aa8.36□□□□□ -1.07
XRCC3-217ENST00000556980 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.34□□□□□ -1.07
XRCC3-217ENST00000556980 CSAG1Q6PB30 78 aa8.34□□□□□ -1.07
XRCC3-217ENST00000556980 LCA10Q71F78 164 aa8.34□□□□□ -1.07
XRCC3-217ENST00000556980 LINC00643Q86TS7 51 aa8.34□□□□□ -1.07
XRCC3-217ENST00000556980 UQCRQO14949 82 aa8.33□□□□□ -1.08
XRCC3-217ENST00000556980 FAM236AA0A1B0GUQ0 79 aa8.31□□□□□ -1.08
XRCC3-217ENST00000556980 FAM236BA0A1B0GV22 79 aa8.31□□□□□ -1.08
XRCC3-217ENST00000556980 FCGBPQ9Y6R7 5405 aaPredicted RBP8.3□□□□□ -1.08
XRCC3-217ENST00000556980 A0A087WVE0 104 aa8.3□□□□□ -1.08
XRCC3-217ENST00000556980 H0Y9P7 68 aa8.29□□□□□ -1.08
XRCC3-217ENST00000556980 ATOX1O00244 68 aa8.29□□□□□ -1.08
XRCC3-217ENST00000556980 KRTAP19-6Q3LI70 58 aa8.27□□□□□ -1.09
XRCC3-217ENST00000556980 KRTAP9-7A8MTY7 169 aa8.21□□□□□ -1.1
XRCC3-217ENST00000556980 J3QR89 54 aa8.2□□□□□ -1.1
XRCC3-217ENST00000556980 KRTAP3-3Q9BYR6 98 aa8.19□□□□□ -1.1
XRCC3-217ENST00000556980 LINC00208Q96KT6 92 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms