RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 Q96NJ1 140 aa6.17□□□□□ -1.42
SLIRP-205ENST00000556310 LOC105371267A0A1B0GV96 52 aa6.14□□□□□ -1.43
SLIRP-205ENST00000556310 CCKP06307 115 aa6.14□□□□□ -1.43
SLIRP-205ENST00000556310 NAA38Q9BRA0 125 aaKnown RBP6.14□□□□□ -1.43
SLIRP-205ENST00000556310 ATXN8Q156A1 80 aa6.13□□□□□ -1.43
SLIRP-205ENST00000556310 Q75L30 129 aa6.13□□□□□ -1.43
SLIRP-205ENST00000556310 SIGMAR1Q99720 223 aa6.13□□□□□ -1.43
SLIRP-205ENST00000556310 BAALC-AS2P0C853 105 aa6.12□□□□□ -1.43
SLIRP-205ENST00000556310 RBM3P98179 157 aaKnown RBP6.12□□□□□ -1.43
SLIRP-205ENST00000556310 LYRM7Q5U5X0 104 aa6.12□□□□□ -1.43
SLIRP-205ENST00000556310 KRTAP4-2Q9BYR5 136 aa6.12□□□□□ -1.43
SLIRP-205ENST00000556310 DSCR8Q96T75 97 aa6.11□□□□□ -1.43
SLIRP-205ENST00000556310 BATFQ16520 125 aa6.1□□□□□ -1.43
SLIRP-205ENST00000556310 KRTAP19-2Q3LHN2 52 aa6.1□□□□□ -1.43
SLIRP-205ENST00000556310 IGKV4-1P06312 121 aa6.09□□□□□ -1.43
SLIRP-205ENST00000556310 C20orf166-AS1Q96NR2 134 aa6.09□□□□□ -1.43
SLIRP-205ENST00000556310 VPS25Q9BRG1 176 aa6.09□□□□□ -1.43
SLIRP-205ENST00000556310 C9JAW5 83 aa6.08□□□□□ -1.44
SLIRP-205ENST00000556310 ATP11AUNQ6ZP68 121 aa6.08□□□□□ -1.44
SLIRP-205ENST00000556310 LINC00472Q9H8W2 130 aa6.08□□□□□ -1.44
SLIRP-205ENST00000556310 TRBV20-1A0A075B6N2 111 aa6.07□□□□□ -1.44
SLIRP-205ENST00000556310 A8MUU9 505 aa6.07□□□□□ -1.44
SLIRP-205ENST00000556310 DSCR10P59022 87 aa6.07□□□□□ -1.44
SLIRP-205ENST00000556310 JMJD7-PLA2G4BH0Y9G9 81 aa6.06□□□□□ -1.44
SLIRP-205ENST00000556310 LOC110117498A0A087WWA1 95 aa6.04□□□□□ -1.44
SLIRP-205ENST00000556310 LINC00313P59037 77 aa6.04□□□□□ -1.44
SLIRP-205ENST00000556310 DEFB116Q30KQ4 102 aa6.04□□□□□ -1.44
SLIRP-205ENST00000556310 Q6ZQT0 140 aa6.03□□□□□ -1.44
SLIRP-205ENST00000556310 A0A1B0GW54 56 aa6.02□□□□□ -1.45
SLIRP-205ENST00000556310 KRTAP16-1A8MUX0 517 aa6.02□□□□□ -1.45
SLIRP-205ENST00000556310 TAX1BP3O14907 124 aa6.02□□□□□ -1.45
SLIRP-205ENST00000556310 PDE6GP18545 87 aa6.02□□□□□ -1.45
SLIRP-205ENST00000556310 IGHV6-1A0A0B4J1U7 121 aa6.01□□□□□ -1.45
SLIRP-205ENST00000556310 A0A1B0GVX0 72 aa6.01□□□□□ -1.45
SLIRP-205ENST00000556310 A0A1W2PPM0 123 aa6.01□□□□□ -1.45
SLIRP-205ENST00000556310 J3KT08 172 aa6.01□□□□□ -1.45
SLIRP-205ENST00000556310 MT1HP80294 61 aa6.01□□□□□ -1.45
SLIRP-205ENST00000556310 COX6B2Q6YFQ2 88 aa6□□□□□ -1.45
SLIRP-205ENST00000556310 NOTCH2NLQ7Z3S9 236 aa6□□□□□ -1.45
SLIRP-205ENST00000556310 C14orf132Q9NPU4 83 aa6□□□□□ -1.45
SLIRP-205ENST00000556310 C8orf87E5RJ46 101 aa5.99□□□□□ -1.45
SLIRP-205ENST00000556310 H3BT86 120 aa5.99□□□□□ -1.45
SLIRP-205ENST00000556310 FLGP20930 4061 aaPredicted RBP5.98□□□□□ -1.45
SLIRP-205ENST00000556310 A0A0A0MQY5 61 aa5.95□□□□□ -1.46
SLIRP-205ENST00000556310 MTURNQ8N3F0 131 aa5.95□□□□□ -1.46
SLIRP-205ENST00000556310 NDUFB1O75438 58 aa5.94□□□□□ -1.46
SLIRP-205ENST00000556310 A8MWP4 228 aa5.93□□□□□ -1.46
SLIRP-205ENST00000556310 MPLKIPQ8TAP9 179 aa5.93□□□□□ -1.46
SLIRP-205ENST00000556310 SPCS1Q9Y6A9 102 aa5.93□□□□□ -1.46
SLIRP-205ENST00000556310 COL5A1-AS1Q5SY13 56 aa5.92□□□□□ -1.46
SLIRP-205ENST00000556310 NREPQ16612 68 aa5.91□□□□□ -1.46
SLIRP-205ENST00000556310 IGKV3D-7A0A0C4DH55 119 aa5.9□□□□□ -1.46
SLIRP-205ENST00000556310 M0R2T5 61 aa5.9□□□□□ -1.46
SLIRP-205ENST00000556310 C8orf17Q9NRJ1 99 aa5.9□□□□□ -1.46
SLIRP-205ENST00000556310 KRTAP10-6P60371 365 aaPredicted RBP5.89□□□□□ -1.47
SLIRP-205ENST00000556310 Q8N9P0 234 aaPredicted RBP5.88□□□□□ -1.47
SLIRP-205ENST00000556310 PRR15Q8IV56 129 aa5.87□□□□□ -1.47
SLIRP-205ENST00000556310 ZCCHC13Q8WW36 166 aaKnown RBP5.87□□□□□ -1.47
SLIRP-205ENST00000556310 K7EP34 96 aa5.85□□□□□ -1.47
SLIRP-205ENST00000556310 HRES1P13985 223 aa5.84□□□□□ -1.47
SLIRP-205ENST00000556310 Q6ZVQ6 151 aa5.84□□□□□ -1.47
SLIRP-205ENST00000556310 PRO0461Q9UI25 63 aa5.84□□□□□ -1.47
SLIRP-205ENST00000556310 MMP24-AS1A0A0U1RRL7 71 aa5.83□□□□□ -1.48
SLIRP-205ENST00000556310 K7EQZ3 153 aa5.82□□□□□ -1.48
SLIRP-205ENST00000556310 TMEM254Q8TBM7 123 aa5.82□□□□□ -1.48
SLIRP-205ENST00000556310 RBM12B-AS1Q9P1G2 102 aa5.82□□□□□ -1.48
SLIRP-205ENST00000556310 FAM236DA0A1B0GTK5 79 aa5.81□□□□□ -1.48
SLIRP-205ENST00000556310 BPY2O14599 106 aa5.81□□□□□ -1.48
SLIRP-205ENST00000556310 FAM236CP0DP71 79 aa5.81□□□□□ -1.48
SLIRP-205ENST00000556310 PCP4L1A6NKN8 68 aa5.8□□□□□ -1.48
SLIRP-205ENST00000556310 MRPL34Q9BQ48 92 aaKnown RBP5.8□□□□□ -1.48
SLIRP-205ENST00000556310 IGKV2-30P06310 120 aa5.79□□□□□ -1.48
SLIRP-205ENST00000556310 SPINK7P58062 85 aa5.79□□□□□ -1.48
SLIRP-205ENST00000556310 GTF2H5Q6ZYL4 71 aa5.79□□□□□ -1.48
SLIRP-205ENST00000556310 hDV103S1A0JD37 113 aa5.78□□□□□ -1.48
SLIRP-205ENST00000556310 FSIP2Q5CZC0 6907 aa5.76□□□□□ -1.49
SLIRP-205ENST00000556310 UBL5Q9BZL1 73 aa5.75□□□□□ -1.49
SLIRP-205ENST00000556310 LINC00846Q9NV44 126 aa5.75□□□□□ -1.49
SLIRP-205ENST00000556310 NDUFS5O43920 106 aa5.74□□□□□ -1.49
SLIRP-205ENST00000556310 Q8N9L7 120 aa5.74□□□□□ -1.49
SLIRP-205ENST00000556310 F8W1H4 67 aa5.73□□□□□ -1.49
SLIRP-205ENST00000556310 WFDC13Q8IUB5 93 aa5.72□□□□□ -1.49
SLIRP-205ENST00000556310 CASC2Q6XLA1 102 aa5.71□□□□□ -1.5
SLIRP-205ENST00000556310 ETDBQ3ZM63 59 aa5.7□□□□□ -1.5
SLIRP-205ENST00000556310 KRTAP9-8Q9BYQ0 159 aa5.69□□□□□ -1.5
SLIRP-205ENST00000556310 HCG22E2RYF7 251 aa5.67□□□□□ -1.5
SLIRP-205ENST00000556310 CRCT1Q9UGL9 99 aa5.67□□□□□ -1.5
SLIRP-205ENST00000556310 Q5W150 140 aa5.66□□□□□ -1.5
SLIRP-205ENST00000556310 CXCL6P80162 114 aa5.65□□□□□ -1.5
SLIRP-205ENST00000556310 C7orf65Q6ZTY9 151 aa5.65□□□□□ -1.5
SLIRP-205ENST00000556310 IGKV2D-30A0A075B6S6 120 aa5.64□□□□□ -1.51
SLIRP-205ENST00000556310 MT2AP02795 61 aa5.63□□□□□ -1.51
SLIRP-205ENST00000556310 MT1FP04733 61 aa5.59□□□□□ -1.51
SLIRP-205ENST00000556310 FAM240AA0A1B0GVK7 77 aa5.58□□□□□ -1.52
SLIRP-205ENST00000556310 ACYP1P07311 99 aa5.58□□□□□ -1.52
SLIRP-205ENST00000556310 H1FX-AS1Q4G0G2 97 aa5.58□□□□□ -1.52
SLIRP-205ENST00000556310 USH2AO75445 5202 aa5.57□□□□□ -1.52
SLIRP-205ENST00000556310 TP53AIP1Q9HCN2 124 aa5.56□□□□□ -1.52
SLIRP-205ENST00000556310 KRTAP10-10P60014 251 aa5.55□□□□□ -1.52
SLIRP-205ENST00000556310 ATP5EP2Q5VTU8 51 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms