RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 PLAC8Q9NZF1 115 aa8.95□□□□□ -0.98
NEK9-209ENST00000556170 MMP24-AS1A0A0U1RRL7 71 aa8.95□□□□□ -0.98
NEK9-209ENST00000556170 LINC00313P59037 77 aa8.94□□□□□ -0.98
NEK9-209ENST00000556170 A0A1B0GU69 56 aa8.94□□□□□ -0.98
NEK9-209ENST00000556170 TYMSOSQ8TAI1 123 aa8.92□□□□□ -0.98
NEK9-209ENST00000556170 Q75L30 129 aa8.91□□□□□ -0.98
NEK9-209ENST00000556170 FBN3Q75N90 2809 aa8.91□□□□□ -0.98
NEK9-209ENST00000556170 Q6ZR54 194 aa8.91□□□□□ -0.98
NEK9-209ENST00000556170 SPANXA2-OT1Q8N9U9 137 aa8.9□□□□□ -0.98
NEK9-209ENST00000556170 SSBP3-AS1Q7Z2R9 100 aa8.89□□□□□ -0.99
NEK9-209ENST00000556170 SPINK1P00995 79 aa8.88□□□□□ -0.99
NEK9-209ENST00000556170 LINC01554Q52M75 96 aa8.88□□□□□ -0.99
NEK9-209ENST00000556170 KRTAP29-1A8MX34 341 aaPredicted RBP8.86□□□□□ -0.99
NEK9-209ENST00000556170 A0A087X002 238 aa8.85□□□□□ -0.99
NEK9-209ENST00000556170 NOTCH2NLQ7Z3S9 236 aa8.85□□□□□ -0.99
NEK9-209ENST00000556170 PRR26Q8N8Z3 221 aa8.84□□□□□ -0.99
NEK9-209ENST00000556170 SPINK7P58062 85 aa8.84□□□□□ -0.99
NEK9-209ENST00000556170 KRTAP10-1P60331 282 aa8.84□□□□□ -0.99
NEK9-209ENST00000556170 KRTAP13-1Q8IUC0 172 aa8.83□□□□□ -1
NEK9-209ENST00000556170 MEGF8Q7Z7M0 2845 aa8.83□□□□□ -1
NEK9-209ENST00000556170 Q96NJ1 140 aa8.83□□□□□ -1
NEK9-209ENST00000556170 DMBT1Q9UGM3 2413 aaPredicted RBP8.82□□□□□ -1
NEK9-209ENST00000556170 ACYP2P14621 99 aa8.81□□□□□ -1
NEK9-209ENST00000556170 ZCCHC13Q8WW36 166 aaKnown RBP8.79□□□□□ -1
NEK9-209ENST00000556170 LINC00483Q53H64 154 aa8.78□□□□□ -1
NEK9-209ENST00000556170 FAM229AH3BQW9 127 aa8.76□□□□□ -1.01
NEK9-209ENST00000556170 A6NN06 94 aa8.75□□□□□ -1.01
NEK9-209ENST00000556170 MIR22HGQ0VDD5 57 aa8.75□□□□□ -1.01
NEK9-209ENST00000556170 IGLV7-46A0A075B6I9 117 aa8.74□□□□□ -1.01
NEK9-209ENST00000556170 LINC01558Q9Y6Z2 57 aa8.74□□□□□ -1.01
NEK9-209ENST00000556170 K7ERS5 55 aa8.74□□□□□ -1.01
NEK9-209ENST00000556170 UQCR11O14957 56 aa8.74□□□□□ -1.01
NEK9-209ENST00000556170 C9orf92A6NGG3 77 aa8.73□□□□□ -1.01
NEK9-209ENST00000556170 HUWE1Q7Z6Z7 4374 aaKnown RBP8.73□□□□□ -1.01
NEK9-209ENST00000556170 ANK2Q01484 3957 aa8.71□□□□□ -1.02
NEK9-209ENST00000556170 FLG2Q5D862 2391 aaPredicted RBP8.71□□□□□ -1.02
NEK9-209ENST00000556170 LCE6AA0A183 80 aa8.71□□□□□ -1.02
NEK9-209ENST00000556170 LINC00304Q8N9R0 145 aa8.71□□□□□ -1.02
NEK9-209ENST00000556170 Q5W150 140 aa8.68□□□□□ -1.02
NEK9-209ENST00000556170 ADM2Q7Z4H4 148 aa8.67□□□□□ -1.02
NEK9-209ENST00000556170 CSAG1Q6PB30 78 aa8.66□□□□□ -1.02
NEK9-209ENST00000556170 HRES1P13985 223 aa8.64□□□□□ -1.03
NEK9-209ENST00000556170 Q8N1X5 172 aa8.62□□□□□ -1.03
NEK9-209ENST00000556170 DNAH10Q8IVF4 4471 aa8.61□□□□□ -1.03
NEK9-209ENST00000556170 KRTAP13-2Q52LG2 175 aa8.61□□□□□ -1.03
NEK9-209ENST00000556170 SPINT4Q6UDR6 99 aa8.55□□□□□ -1.04
NEK9-209ENST00000556170 DNAH9Q9NYC9 4486 aa8.49□□□□□ -1.05
NEK9-209ENST00000556170 PLECQ15149 4684 aaKnown RBP8.49□□□□□ -1.05
NEK9-209ENST00000556170 LYSTQ99698 3801 aa8.44□□□□□ -1.06
NEK9-209ENST00000556170 CRIPTQ9P021 101 aa8.42□□□□□ -1.06
NEK9-209ENST00000556170 Q6ZSA8 131 aa8.41□□□□□ -1.06
NEK9-209ENST00000556170 KRTAP1-4P0C5Y4 121 aa8.39□□□□□ -1.07
NEK9-209ENST00000556170 ASB16-AS1Q495Z4 193 aa8.39□□□□□ -1.07
NEK9-209ENST00000556170 DMAC1Q96GE9 116 aa8.35□□□□□ -1.07
NEK9-209ENST00000556170 DNHD1Q96M86 4753 aa8.33□□□□□ -1.08
NEK9-209ENST00000556170 STARD9Q9P2P6 4700 aa8.32□□□□□ -1.08
NEK9-209ENST00000556170 PRKDCP78527 4128 aaKnown RBP8.3□□□□□ -1.08
NEK9-209ENST00000556170 CMYA5Q8N3K9 4069 aa8.29□□□□□ -1.08
NEK9-209ENST00000556170 SPATA8Q6RVD6 105 aa8.29□□□□□ -1.08
NEK9-209ENST00000556170 DNAH1Q9P2D7 4330 aa8.26□□□□□ -1.09
NEK9-209ENST00000556170 Q5VSD8 79 aa8.23□□□□□ -1.09
NEK9-209ENST00000556170 DNAH11Q96DT5 4516 aa8.22□□□□□ -1.09
NEK9-209ENST00000556170 DNAH3Q8TD57 4116 aa8.2□□□□□ -1.1
NEK9-209ENST00000556170 KMT2AQ03164 3969 aa8.2□□□□□ -1.1
NEK9-209ENST00000556170 DNAH7Q8WXX0 4024 aa8.2□□□□□ -1.1
NEK9-209ENST00000556170 KRTAP16-1A8MUX0 517 aa8.17□□□□□ -1.1
NEK9-209ENST00000556170 A0A1B0GU33 70 aa8.16□□□□□ -1.1
NEK9-209ENST00000556170 ROMO1P60602 79 aa8.15□□□□□ -1.1
NEK9-209ENST00000556170 KRTAP13-3Q3SY46 172 aa8.15□□□□□ -1.1
NEK9-209ENST00000556170 A0A0D9SG42 100 aa8.13□□□□□ -1.11
NEK9-209ENST00000556170 KRTAP25-1Q3LHN0 102 aa8.12□□□□□ -1.11
NEK9-209ENST00000556170 KRTAP21-3Q3LHN1 58 aa8.12□□□□□ -1.11
NEK9-209ENST00000556170 VPS13DQ5THJ4 4388 aa8.12□□□□□ -1.11
NEK9-209ENST00000556170 RPS29P62273 56 aaKnown RBP8.06□□□□□ -1.12
NEK9-209ENST00000556170 LRP1BQ9NZR2 4599 aa8.02□□□□□ -1.13
NEK9-209ENST00000556170 NDUFAF8A1L188 74 aa8.01□□□□□ -1.13
NEK9-209ENST00000556170 DNAH8Q96JB1 4490 aa8□□□□□ -1.13
NEK9-209ENST00000556170 A8MUU9 505 aa8□□□□□ -1.13
NEK9-209ENST00000556170 J3QL48 77 aa8□□□□□ -1.13
NEK9-209ENST00000556170 COX6B2Q6YFQ2 88 aa8□□□□□ -1.13
NEK9-209ENST00000556170 C20orf166-AS1Q96NR2 134 aa7.98□□□□□ -1.13
NEK9-209ENST00000556170 FRAS1Q86XX4 4008 aa7.98□□□□□ -1.13
NEK9-209ENST00000556170 DNAH17Q9UFH2 4485 aa7.97□□□□□ -1.13
NEK9-209ENST00000556170 DNAH5Q8TE73 4624 aa7.97□□□□□ -1.13
NEK9-209ENST00000556170 A0A1B0GVY2 172 aa7.96□□□□□ -1.13
NEK9-209ENST00000556170 DNAH2Q9P225 4427 aa7.94□□□□□ -1.14
NEK9-209ENST00000556170 FAT1Q14517 4588 aa7.93□□□□□ -1.14
NEK9-209ENST00000556170 DNAH6Q9C0G6 4158 aa7.91□□□□□ -1.14
NEK9-209ENST00000556170 S4R3F8 94 aa7.89□□□□□ -1.15
NEK9-209ENST00000556170 A0A0A0MQY5 61 aa7.88□□□□□ -1.15
NEK9-209ENST00000556170 H1FX-AS1Q4G0G2 97 aa7.88□□□□□ -1.15
NEK9-209ENST00000556170 HECTD4Q9Y4D8 3996 aa7.84□□□□□ -1.15
NEK9-209ENST00000556170 RPL37P61927 97 aaKnown RBP7.82□□□□□ -1.16
NEK9-209ENST00000556170 DYNC2H1Q8NCM8 4307 aaKnown RBP7.82□□□□□ -1.16
NEK9-209ENST00000556170 HYDINQ4G0P3 5121 aa7.8□□□□□ -1.16
NEK9-209ENST00000556170 XP32Q5T750 250 aa7.79□□□□□ -1.16
NEK9-209ENST00000556170 DYNC1H1Q14204 4646 aaKnown RBP7.77□□□□□ -1.17
NEK9-209ENST00000556170 LUZP6Q538Z0 58 aa7.76□□□□□ -1.17
NEK9-209ENST00000556170 KRTAP3-1Q9BYR8 98 aa7.75□□□□□ -1.17
NEK9-209ENST00000556170 VPS13BQ7Z7G8 4022 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms