RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 XP32Q5T750 250 aa7.75□□□□□ -1.17
SNX6-206ENST00000556162 RNF213Q63HN8 5207 aa7.74□□□□□ -1.17
SNX6-206ENST00000556162 NREPQ16612 68 aa7.74□□□□□ -1.17
SNX6-206ENST00000556162 MUC17Q685J3 4493 aa7.73□□□□□ -1.17
SNX6-206ENST00000556162 J3KT08 172 aa7.73□□□□□ -1.17
SNX6-206ENST00000556162 LCE2AQ5TA79 106 aaPredicted RBP7.72□□□□□ -1.17
SNX6-206ENST00000556162 MT-ATP8P03928 68 aa7.69□□□□□ -1.18
SNX6-206ENST00000556162 SEC61BP60468 96 aaKnown RBP7.68□□□□□ -1.18
SNX6-206ENST00000556162 IGHV6-1A0A0B4J1U7 121 aa7.67□□□□□ -1.18
SNX6-206ENST00000556162 FAM240AA0A1B0GVK7 77 aa7.67□□□□□ -1.18
SNX6-206ENST00000556162 NDUFB1O75438 58 aa7.67□□□□□ -1.18
SNX6-206ENST00000556162 LINC00313P59037 77 aa7.67□□□□□ -1.18
SNX6-206ENST00000556162 DSCR10P59022 87 aa7.66□□□□□ -1.18
SNX6-206ENST00000556162 MUC2Q02817 5179 aa7.66□□□□□ -1.18
SNX6-206ENST00000556162 A0A1B0GVX0 72 aa7.66□□□□□ -1.18
SNX6-206ENST00000556162 Q6ZVQ6 151 aa7.64□□□□□ -1.19
SNX6-206ENST00000556162 A8MWP4 228 aa7.64□□□□□ -1.19
SNX6-206ENST00000556162 ACYP1P07311 99 aa7.64□□□□□ -1.19
SNX6-206ENST00000556162 LINC00846Q9NV44 126 aa7.64□□□□□ -1.19
SNX6-206ENST00000556162 RPL37P61927 97 aaKnown RBP7.63□□□□□ -1.19
SNX6-206ENST00000556162 UBL5Q9BZL1 73 aa7.63□□□□□ -1.19
SNX6-206ENST00000556162 C8orf87E5RJ46 101 aa7.62□□□□□ -1.19
SNX6-206ENST00000556162 BPY2O14599 106 aa7.62□□□□□ -1.19
SNX6-206ENST00000556162 NOTCH2NLQ7Z3S9 236 aa7.62□□□□□ -1.19
SNX6-206ENST00000556162 Q75L30 129 aa7.61□□□□□ -1.19
SNX6-206ENST00000556162 IGKV3D-7A0A0C4DH55 119 aa7.6□□□□□ -1.19
SNX6-206ENST00000556162 PCOTHQ58A44 107 aa7.6□□□□□ -1.19
SNX6-206ENST00000556162 PRR15Q8IV56 129 aa7.59□□□□□ -1.19
SNX6-206ENST00000556162 C20orf166-AS1Q96NR2 134 aa7.59□□□□□ -1.19
SNX6-206ENST00000556162 A8MUU9 505 aa7.57□□□□□ -1.2
SNX6-206ENST00000556162 KRTAP16-1A8MUX0 517 aa7.57□□□□□ -1.2
SNX6-206ENST00000556162 ATP11AUNQ6ZP68 121 aa7.57□□□□□ -1.2
SNX6-206ENST00000556162 ANAPC13Q9BS18 74 aa7.56□□□□□ -1.2
SNX6-206ENST00000556162 C8orf17Q9NRJ1 99 aa7.56□□□□□ -1.2
SNX6-206ENST00000556162 K7EQZ3 153 aa7.55□□□□□ -1.2
SNX6-206ENST00000556162 LCE2CQ5TA81 110 aa7.54□□□□□ -1.2
SNX6-206ENST00000556162 LINC00643Q86TS7 51 aa7.52□□□□□ -1.21
SNX6-206ENST00000556162 IMUPQ9GZP8 106 aa7.52□□□□□ -1.21
SNX6-206ENST00000556162 Q8N9L7 120 aa7.51□□□□□ -1.21
SNX6-206ENST00000556162 SVIPQ8NHG7 77 aa7.5□□□□□ -1.21
SNX6-206ENST00000556162 KRTAP4-1Q9BYQ7 146 aa7.5□□□□□ -1.21
SNX6-206ENST00000556162 MMP24-AS1A0A0U1RRL7 71 aa7.49□□□□□ -1.21
SNX6-206ENST00000556162 CXCL6P80162 114 aa7.48□□□□□ -1.21
SNX6-206ENST00000556162 hDV103S1A0JD37 113 aa7.47□□□□□ -1.21
SNX6-206ENST00000556162 Q8N9P0 234 aaPredicted RBP7.47□□□□□ -1.21
SNX6-206ENST00000556162 TMEM254Q8TBM7 123 aa7.47□□□□□ -1.21
SNX6-206ENST00000556162 MRPL34Q9BQ48 92 aaKnown RBP7.46□□□□□ -1.22
SNX6-206ENST00000556162 A0A0U1RQV1 116 aa7.45□□□□□ -1.22
SNX6-206ENST00000556162 WFDC13Q8IUB5 93 aa7.43□□□□□ -1.22
SNX6-206ENST00000556162 FAT4Q6V0I7 4981 aa7.43□□□□□ -1.22
SNX6-206ENST00000556162 CASC2Q6XLA1 102 aa7.43□□□□□ -1.22
SNX6-206ENST00000556162 ATP5EP2Q5VTU8 51 aa7.41□□□□□ -1.22
SNX6-206ENST00000556162 FAM236AA0A1B0GUQ0 79 aa7.41□□□□□ -1.22
SNX6-206ENST00000556162 FAM236BA0A1B0GV22 79 aa7.41□□□□□ -1.22
SNX6-206ENST00000556162 HCG22E2RYF7 251 aa7.41□□□□□ -1.22
SNX6-206ENST00000556162 NDUFS5O43920 106 aa7.41□□□□□ -1.22
SNX6-206ENST00000556162 ZCCHC13Q8WW36 166 aaKnown RBP7.41□□□□□ -1.22
SNX6-206ENST00000556162 LORP23490 312 aaPredicted RBP7.39□□□□□ -1.23
SNX6-206ENST00000556162 CCDC179H3BU77 68 aa7.36□□□□□ -1.23
SNX6-206ENST00000556162 HIST1H4AP62805 103 aaKnown RBP7.34□□□□□ -1.23
SNX6-206ENST00000556162 ATOX1O00244 68 aa7.34□□□□□ -1.23
SNX6-206ENST00000556162 UQCRQO14949 82 aa7.3□□□□□ -1.24
SNX6-206ENST00000556162 SPINK7P58062 85 aa7.28□□□□□ -1.24
SNX6-206ENST00000556162 COX7CP15954 63 aa7.28□□□□□ -1.24
SNX6-206ENST00000556162 Q5W150 140 aa7.27□□□□□ -1.25
SNX6-206ENST00000556162 KRTAP19-2Q3LHN2 52 aa7.26□□□□□ -1.25
SNX6-206ENST00000556162 COX6B2Q6YFQ2 88 aa7.26□□□□□ -1.25
SNX6-206ENST00000556162 TP53AIP1Q9HCN2 124 aa7.26□□□□□ -1.25
SNX6-206ENST00000556162 A0A087WVE0 104 aa7.25□□□□□ -1.25
SNX6-206ENST00000556162 SERP2Q8N6R1 65 aa7.24□□□□□ -1.25
SNX6-206ENST00000556162 HRES1P13985 223 aa7.22□□□□□ -1.25
SNX6-206ENST00000556162 RBM12B-AS1Q9P1G2 102 aa7.21□□□□□ -1.26
SNX6-206ENST00000556162 IGKV2D-30A0A075B6S6 120 aa7.19□□□□□ -1.26
SNX6-206ENST00000556162 IGKV2-30P06310 120 aa7.19□□□□□ -1.26
SNX6-206ENST00000556162 C7orf65Q6ZTY9 151 aa7.18□□□□□ -1.26
SNX6-206ENST00000556162 MPLKIPQ8TAP9 179 aa7.18□□□□□ -1.26
SNX6-206ENST00000556162 FAM236DA0A1B0GTK5 79 aa7.17□□□□□ -1.26
SNX6-206ENST00000556162 FAM236CP0DP71 79 aa7.17□□□□□ -1.26
SNX6-206ENST00000556162 FLGP20930 4061 aaPredicted RBP7.16□□□□□ -1.26
SNX6-206ENST00000556162 SMIM20Q8N5G0 67 aa7.16□□□□□ -1.26
SNX6-206ENST00000556162 MT1HP80294 61 aa7.14□□□□□ -1.27
SNX6-206ENST00000556162 TRAV22A0A0B4J277 110 aa7.13□□□□□ -1.27
SNX6-206ENST00000556162 TRAV7A0A075B6U4 112 aa7.11□□□□□ -1.27
SNX6-206ENST00000556162 TMEM258P61165 79 aa7.11□□□□□ -1.27
SNX6-206ENST00000556162 M0R2T5 61 aa7.09□□□□□ -1.28
SNX6-206ENST00000556162 OCR1Q9BZK8 76 aa7.07□□□□□ -1.28
SNX6-206ENST00000556162 LOC100996750A0A140TA64 210 aa7.07□□□□□ -1.28
SNX6-206ENST00000556162 H0Y9P7 68 aa7.07□□□□□ -1.28
SNX6-206ENST00000556162 KRTAP4-6Q9BYQ5 205 aa7.07□□□□□ -1.28
SNX6-206ENST00000556162 LOC101927531A0A1B0GV80 90 aa7.06□□□□□ -1.28
SNX6-206ENST00000556162 CYP4F30PQ9H0H9 118 aa7.04□□□□□ -1.28
SNX6-206ENST00000556162 CYSTM1Q9H1C7 97 aa7.04□□□□□ -1.28
SNX6-206ENST00000556162 RPS28P62857 69 aaKnown RBP7.04□□□□□ -1.28
SNX6-206ENST00000556162 C20orf197Q8N268 126 aa7.04□□□□□ -1.28
SNX6-206ENST00000556162 C4orf26Q17RF5 130 aa7.03□□□□□ -1.28
SNX6-206ENST00000556162 MP68P56378 58 aa7.02□□□□□ -1.28
SNX6-206ENST00000556162 C5orf47Q569G3 176 aa7.02□□□□□ -1.29
SNX6-206ENST00000556162 KLKP1Q107X0 134 aa7□□□□□ -1.29
SNX6-206ENST00000556162 C1orf64Q8NEQ6 169 aa7□□□□□ -1.29
SNX6-206ENST00000556162 LINC00208Q96KT6 92 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms