RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 CCKP06307 115 aa7.09□□□□□ -1.27
PCNX4-209ENST00000555569 TMA7Q9Y2S6 64 aaKnown RBP7.09□□□□□ -1.27
PCNX4-209ENST00000555569 TRACP01848 142 aa7.08□□□□□ -1.28
PCNX4-209ENST00000555569 TRBV20-1A0A075B6N2 111 aa7.07□□□□□ -1.28
PCNX4-209ENST00000555569 LINC00472Q9H8W2 130 aa7.07□□□□□ -1.28
PCNX4-209ENST00000555569 FSIP2Q5CZC0 6907 aa7.07□□□□□ -1.28
PCNX4-209ENST00000555569 KRTAP16-1A8MUX0 517 aa7.06□□□□□ -1.28
PCNX4-209ENST00000555569 SCGB1C2P0DMR2 95 aa7.06□□□□□ -1.28
PCNX4-209ENST00000555569 DEFB116Q30KQ4 102 aa7.06□□□□□ -1.28
PCNX4-209ENST00000555569 NOTCH2NLQ7Z3S9 236 aa7.05□□□□□ -1.28
PCNX4-209ENST00000555569 VPS25Q9BRG1 176 aa7.04□□□□□ -1.28
PCNX4-209ENST00000555569 RBM3P98179 157 aaKnown RBP7.03□□□□□ -1.28
PCNX4-209ENST00000555569 IGHV6-1A0A0B4J1U7 121 aa7.02□□□□□ -1.29
PCNX4-209ENST00000555569 DSCR8Q96T75 97 aa7.02□□□□□ -1.29
PCNX4-209ENST00000555569 BAALC-AS2P0C853 105 aa7□□□□□ -1.29
PCNX4-209ENST00000555569 A0A1B0GVX0 72 aa6.98□□□□□ -1.29
PCNX4-209ENST00000555569 C8orf87E5RJ46 101 aa6.98□□□□□ -1.29
PCNX4-209ENST00000555569 C9JAW5 83 aa6.97□□□□□ -1.29
PCNX4-209ENST00000555569 FAM236DA0A1B0GTK5 79 aa6.96□□□□□ -1.3
PCNX4-209ENST00000555569 FAM236CP0DP71 79 aa6.96□□□□□ -1.3
PCNX4-209ENST00000555569 C21orf62-AS1Q17RA5 79 aa6.96□□□□□ -1.3
PCNX4-209ENST00000555569 J3KT08 172 aa6.95□□□□□ -1.3
PCNX4-209ENST00000555569 LCE4AQ5TA78 99 aa6.95□□□□□ -1.3
PCNX4-209ENST00000555569 M0R143 59 aa6.94□□□□□ -1.3
PCNX4-209ENST00000555569 HRES1P13985 223 aa6.94□□□□□ -1.3
PCNX4-209ENST00000555569 RBM12B-AS1Q9P1G2 102 aa6.94□□□□□ -1.3
PCNX4-209ENST00000555569 ATXN8Q156A1 80 aa6.93□□□□□ -1.3
PCNX4-209ENST00000555569 Q6ZQT0 140 aa6.93□□□□□ -1.3
PCNX4-209ENST00000555569 MPLKIPQ8TAP9 179 aa6.93□□□□□ -1.3
PCNX4-209ENST00000555569 NAA38Q9BRA0 125 aaKnown RBP6.92□□□□□ -1.3
PCNX4-209ENST00000555569 JMJD7-PLA2G4BH0Y9G9 81 aa6.9□□□□□ -1.3
PCNX4-209ENST00000555569 NDUFB1O75438 58 aa6.89□□□□□ -1.31
PCNX4-209ENST00000555569 ZCCHC13Q8WW36 166 aaKnown RBP6.89□□□□□ -1.31
PCNX4-209ENST00000555569 LOC110117498A0A087WWA1 95 aa6.88□□□□□ -1.31
PCNX4-209ENST00000555569 A0A1B0GW54 56 aa6.87□□□□□ -1.31
PCNX4-209ENST00000555569 PDE6GP18545 87 aa6.86□□□□□ -1.31
PCNX4-209ENST00000555569 LYRM7Q5U5X0 104 aa6.85□□□□□ -1.31
PCNX4-209ENST00000555569 Q8N9P0 234 aaPredicted RBP6.85□□□□□ -1.31
PCNX4-209ENST00000555569 C8orf17Q9NRJ1 99 aa6.85□□□□□ -1.31
PCNX4-209ENST00000555569 A8MWP4 228 aa6.84□□□□□ -1.31
PCNX4-209ENST00000555569 MT2AP02795 61 aa6.84□□□□□ -1.31
PCNX4-209ENST00000555569 SMIM6P0DI80 62 aa6.84□□□□□ -1.31
PCNX4-209ENST00000555569 C14orf132Q9NPU4 83 aa6.84□□□□□ -1.31
PCNX4-209ENST00000555569 SPINK7P58062 85 aa6.83□□□□□ -1.32
PCNX4-209ENST00000555569 MTURNQ8N3F0 131 aa6.83□□□□□ -1.32
PCNX4-209ENST00000555569 IGKV3D-7A0A0C4DH55 119 aa6.82□□□□□ -1.32
PCNX4-209ENST00000555569 NREPQ16612 68 aa6.79□□□□□ -1.32
PCNX4-209ENST00000555569 TSTD3H0UI37 97 aa6.78□□□□□ -1.32
PCNX4-209ENST00000555569 MT1FP04733 61 aa6.78□□□□□ -1.32
PCNX4-209ENST00000555569 BATFQ16520 125 aa6.78□□□□□ -1.32
PCNX4-209ENST00000555569 LCE5AQ5TCM9 118 aa6.78□□□□□ -1.32
PCNX4-209ENST00000555569 Q6ZVQ6 151 aa6.78□□□□□ -1.32
PCNX4-209ENST00000555569 PRR15Q8IV56 129 aa6.78□□□□□ -1.32
PCNX4-209ENST00000555569 KRTAP10-10P60014 251 aa6.76□□□□□ -1.33
PCNX4-209ENST00000555569 WFDC13Q8IUB5 93 aa6.75□□□□□ -1.33
PCNX4-209ENST00000555569 MMP24-AS1A0A0U1RRL7 71 aa6.73□□□□□ -1.33
PCNX4-209ENST00000555569 C9orf118A6NHY6 69 aa6.73□□□□□ -1.33
PCNX4-209ENST00000555569 TMEM254Q8TBM7 123 aa6.73□□□□□ -1.33
PCNX4-209ENST00000555569 KRTAP9-3Q9BYQ3 159 aa6.73□□□□□ -1.33
PCNX4-209ENST00000555569 H3BT86 120 aa6.72□□□□□ -1.33
PCNX4-209ENST00000555569 MRPL34Q9BQ48 92 aaKnown RBP6.72□□□□□ -1.33
PCNX4-209ENST00000555569 TAX1BP3O14907 124 aa6.7□□□□□ -1.34
PCNX4-209ENST00000555569 USH2AO75445 5202 aa6.69□□□□□ -1.34
PCNX4-209ENST00000555569 A0A1W2PPM0 123 aa6.69□□□□□ -1.34
PCNX4-209ENST00000555569 hDV103S1A0JD37 113 aa6.69□□□□□ -1.34
PCNX4-209ENST00000555569 K7EQZ3 153 aa6.69□□□□□ -1.34
PCNX4-209ENST00000555569 NDUFS5O43920 106 aa6.67□□□□□ -1.34
PCNX4-209ENST00000555569 BPY2O14599 106 aa6.66□□□□□ -1.34
PCNX4-209ENST00000555569 SSPOA2VEC9 5147 aa6.65□□□□□ -1.35
PCNX4-209ENST00000555569 LOC105371267A0A1B0GV96 52 aa6.64□□□□□ -1.35
PCNX4-209ENST00000555569 KRTAP9-7A8MTY7 169 aa6.63□□□□□ -1.35
PCNX4-209ENST00000555569 H1FX-AS1Q4G0G2 97 aa6.61□□□□□ -1.35
PCNX4-209ENST00000555569 SPCS1Q9Y6A9 102 aa6.6□□□□□ -1.35
PCNX4-209ENST00000555569 IGKV2D-30A0A075B6S6 120 aa6.59□□□□□ -1.35
PCNX4-209ENST00000555569 IGKV2-30P06310 120 aa6.59□□□□□ -1.35
PCNX4-209ENST00000555569 Q5W150 140 aa6.59□□□□□ -1.35
PCNX4-209ENST00000555569 C7orf65Q6ZTY9 151 aa6.58□□□□□ -1.36
PCNX4-209ENST00000555569 Q8N9L7 120 aa6.58□□□□□ -1.36
PCNX4-209ENST00000555569 CASC2Q6XLA1 102 aa6.57□□□□□ -1.36
PCNX4-209ENST00000555569 HCG22E2RYF7 251 aa6.56□□□□□ -1.36
PCNX4-209ENST00000555569 FCGBPQ9Y6R7 5405 aaPredicted RBP6.53□□□□□ -1.36
PCNX4-209ENST00000555569 CXCL6P80162 114 aa6.51□□□□□ -1.37
PCNX4-209ENST00000555569 UBL5Q9BZL1 73 aa6.51□□□□□ -1.37
PCNX4-209ENST00000555569 LINC00846Q9NV44 126 aa6.51□□□□□ -1.37
PCNX4-209ENST00000555569 COL5A1-AS1Q5SY13 56 aa6.5□□□□□ -1.37
PCNX4-209ENST00000555569 PRO0461Q9UI25 63 aa6.5□□□□□ -1.37
PCNX4-209ENST00000555569 C4orf26Q17RF5 130 aa6.48□□□□□ -1.37
PCNX4-209ENST00000555569 KRTAP19-6Q3LI70 58 aa6.48□□□□□ -1.37
PCNX4-209ENST00000555569 K7EP34 96 aa6.47□□□□□ -1.37
PCNX4-209ENST00000555569 MACF1Q9UPN3 7388 aaKnown RBP6.38□□□□□ -1.39
PCNX4-209ENST00000555569 C5orf47Q569G3 176 aa6.38□□□□□ -1.39
PCNX4-209ENST00000555569 GTF2H5Q6ZYL4 71 aa6.38□□□□□ -1.39
PCNX4-209ENST00000555569 KRTAP3-1Q9BYR8 98 aa6.38□□□□□ -1.39
PCNX4-209ENST00000555569 C1orf64Q8NEQ6 169 aa6.36□□□□□ -1.39
PCNX4-209ENST00000555569 TP53AIP1Q9HCN2 124 aa6.36□□□□□ -1.39
PCNX4-209ENST00000555569 S4R3F8 94 aa6.36□□□□□ -1.39
PCNX4-209ENST00000555569 F8W1H4 67 aa6.34□□□□□ -1.39
PCNX4-209ENST00000555569 FAM236AA0A1B0GUQ0 79 aa6.33□□□□□ -1.4
PCNX4-209ENST00000555569 FAM236BA0A1B0GV22 79 aa6.33□□□□□ -1.4
PCNX4-209ENST00000555569 ETDBQ3ZM63 59 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 153 ms