RNA–Protein interactions for RNA: ENST00000555358.5

STRN3-207, Transcript of striatin 3, humanhuman

TSL 1 (best)

Gene STRN3, Length 2,208 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-207ENST00000555358 PKHD1P08F94 4074 aa14.17□□□□□ -0.14
STRN3-207ENST00000555358 A8MUN3 132 aa14.16□□□□□ -0.14
STRN3-207ENST00000555358 MOBPQ13875 183 aa14.16□□□□□ -0.14
STRN3-207ENST00000555358 C1orf195Q5TG92 126 aa14.14□□□□□ -0.15
STRN3-207ENST00000555358 Q6ZSA8 131 aa14.14□□□□□ -0.15
STRN3-207ENST00000555358 RYR2Q92736 4967 aa14.14□□□□□ -0.15
STRN3-207ENST00000555358 C8orf17Q9NRJ1 99 aa14.14□□□□□ -0.15
STRN3-207ENST00000555358 IGLV7-46A0A075B6I9 117 aa14.13□□□□□ -0.15
STRN3-207ENST00000555358 Q8N9P0 234 aaPredicted RBP14.12□□□□□ -0.15
STRN3-207ENST00000555358 TP53AIP1Q9HCN2 124 aa14.12□□□□□ -0.15
STRN3-207ENST00000555358 Q5VV11 94 aa14.1□□□□□ -0.15
STRN3-207ENST00000555358 LRP1BQ9NZR2 4599 aa14.1□□□□□ -0.15
STRN3-207ENST00000555358 ZNF706Q9Y5V0 76 aaPredicted RBP14.09□□□□□ -0.15
STRN3-207ENST00000555358 A0A1B0GVX0 72 aa14.07□□□□□ -0.16
STRN3-207ENST00000555358 COA5Q86WW8 74 aa14.06□□□□□ -0.16
STRN3-207ENST00000555358 CD164Q04900 197 aa14.05□□□□□ -0.16
STRN3-207ENST00000555358 IGHV6-1A0A0B4J1U7 121 aa14.05□□□□□ -0.16
STRN3-207ENST00000555358 ZNF861PO60384 105 aa14.05□□□□□ -0.16
STRN3-207ENST00000555358 PCOTHQ58A44 107 aa14.05□□□□□ -0.16
STRN3-207ENST00000555358 LIMD2Q9BT23 127 aa14.05□□□□□ -0.16
STRN3-207ENST00000555358 ANAPC11Q9NYG5 84 aa14.02□□□□□ -0.16
STRN3-207ENST00000555358 IGLV7-43P04211 117 aa14.01□□□□□ -0.17
STRN3-207ENST00000555358 DYNC1H1Q14204 4646 aaKnown RBP13.99□□□□□ -0.17
STRN3-207ENST00000555358 A0A1B0GVY2 172 aa13.98□□□□□ -0.17
STRN3-207ENST00000555358 MRPL34Q9BQ48 92 aaKnown RBP13.98□□□□□ -0.17
STRN3-207ENST00000555358 A0A087X002 238 aa13.97□□□□□ -0.17
STRN3-207ENST00000555358 NDUFS5O43920 106 aa13.97□□□□□ -0.17
STRN3-207ENST00000555358 NOTCH2NLQ7Z3S9 236 aa13.97□□□□□ -0.17
STRN3-207ENST00000555358 PRR15LQ9BU68 103 aa13.96□□□□□ -0.17
STRN3-207ENST00000555358 CDK2AP2O75956 126 aa13.95□□□□□ -0.18
STRN3-207ENST00000555358 A8MU10 97 aa13.95□□□□□ -0.18
STRN3-207ENST00000555358 VPS13BQ7Z7G8 4022 aa13.94□□□□□ -0.18
STRN3-207ENST00000555358 CHKB-CPT1BH3BT56 60 aa13.92□□□□□ -0.18
STRN3-207ENST00000555358 LOC101927531A0A1B0GV80 90 aa13.9□□□□□ -0.18
STRN3-207ENST00000555358 Q75L30 129 aa13.87□□□□□ -0.19
STRN3-207ENST00000555358 RYR3Q15413 4870 aa13.83□□□□□ -0.2
STRN3-207ENST00000555358 APOBP04114 4563 aaKnown RBP13.82□□□□□ -0.2
STRN3-207ENST00000555358 HRES1P13985 223 aa13.82□□□□□ -0.2
STRN3-207ENST00000555358 PMAIP1Q13794 54 aa13.8□□□□□ -0.2
STRN3-207ENST00000555358 KRTAP13-3Q3SY46 172 aa13.8□□□□□ -0.2
STRN3-207ENST00000555358 SPINK6Q6UWN8 80 aa13.8□□□□□ -0.2
STRN3-207ENST00000555358 LINC01558Q9Y6Z2 57 aa13.79□□□□□ -0.2
STRN3-207ENST00000555358 Q5W150 140 aa13.79□□□□□ -0.2
STRN3-207ENST00000555358 SPAG11AQ6PDA7 123 aa13.77□□□□□ -0.21
STRN3-207ENST00000555358 LCA10Q71F78 164 aa13.76□□□□□ -0.21
STRN3-207ENST00000555358 SMR3BP02814 79 aaPredicted RBP13.74□□□□□ -0.21
STRN3-207ENST00000555358 A6NED7 52 aa13.72□□□□□ -0.21
STRN3-207ENST00000555358 FAT1Q14517 4588 aa13.71□□□□□ -0.21
STRN3-207ENST00000555358 SSBP3-AS1Q7Z2R9 100 aa13.67□□□□□ -0.22
STRN3-207ENST00000555358 C8orf87E5RJ46 101 aa13.65□□□□□ -0.22
STRN3-207ENST00000555358 KRTAP1-4P0C5Y4 121 aa13.64□□□□□ -0.23
STRN3-207ENST00000555358 ATP11AUNQ6ZP68 121 aa13.63□□□□□ -0.23
STRN3-207ENST00000555358 CDC42SE1Q9NRR8 79 aa13.63□□□□□ -0.23
STRN3-207ENST00000555358 KRTAP13-2Q52LG2 175 aa13.62□□□□□ -0.23
STRN3-207ENST00000555358 SPTSSBQ8NFR3 76 aa13.61□□□□□ -0.23
STRN3-207ENST00000555358 PRR26Q8N8Z3 221 aa13.58□□□□□ -0.24
STRN3-207ENST00000555358 SPINK7P58062 85 aa13.55□□□□□ -0.24
STRN3-207ENST00000555358 SEC61GP60059 68 aa13.55□□□□□ -0.24
STRN3-207ENST00000555358 KRTAP10-4P60372 401 aaPredicted RBP13.54□□□□□ -0.24
STRN3-207ENST00000555358 LINC00313P59037 77 aa13.54□□□□□ -0.24
STRN3-207ENST00000555358 PLA2G1BP04054 148 aaKnown RBP13.52□□□□□ -0.24
STRN3-207ENST00000555358 ACYP2P14621 99 aa13.52□□□□□ -0.24
STRN3-207ENST00000555358 A6NN06 94 aa13.5□□□□□ -0.25
STRN3-207ENST00000555358 DMAC1Q96GE9 116 aa13.5□□□□□ -0.25
STRN3-207ENST00000555358 FAM229AH3BQW9 127 aa13.49□□□□□ -0.25
STRN3-207ENST00000555358 KTN1-AS1Q86SY8 53 aa13.47□□□□□ -0.25
STRN3-207ENST00000555358 HSPG2P98160 4391 aa13.46□□□□□ -0.25
STRN3-207ENST00000555358 RETNLBQ9BQ08 111 aa13.44□□□□□ -0.26
STRN3-207ENST00000555358 IGKV2-30P06310 120 aa13.43□□□□□ -0.26
STRN3-207ENST00000555358 KRTAP16-1A8MUX0 517 aa13.43□□□□□ -0.26
STRN3-207ENST00000555358 TYMSOSQ8TAI1 123 aa13.4□□□□□ -0.26
STRN3-207ENST00000555358 RYR1P21817 5038 aa13.35□□□□□ -0.27
STRN3-207ENST00000555358 EPPK1P58107 5090 aaKnown RBP13.33□□□□□ -0.28
STRN3-207ENST00000555358 PKHD1L1Q86WI1 4243 aa13.32□□□□□ -0.28
STRN3-207ENST00000555358 KRTAP17-1Q9BYP8 105 aa13.28□□□□□ -0.28
STRN3-207ENST00000555358 Q5VSD8 79 aa13.27□□□□□ -0.28
STRN3-207ENST00000555358 KIAA1109Q2LD37 5005 aa13.27□□□□□ -0.29
STRN3-207ENST00000555358 C4orf48Q5BLP8 95 aa13.26□□□□□ -0.29
STRN3-207ENST00000555358 LINC00304Q8N9R0 145 aa13.23□□□□□ -0.29
STRN3-207ENST00000555358 C7orf65Q6ZTY9 151 aa13.22□□□□□ -0.29
STRN3-207ENST00000555358 A0A1B0GU69 56 aa13.21□□□□□ -0.29
STRN3-207ENST00000555358 IGKV2D-30A0A075B6S6 120 aa13.2□□□□□ -0.3
STRN3-207ENST00000555358 SPINK1P00995 79 aa13.2□□□□□ -0.3
STRN3-207ENST00000555358 LRP1Q07954 4544 aaKnown RBP13.19□□□□□ -0.3
STRN3-207ENST00000555358 RBM12B-AS1Q9P1G2 102 aa13.17□□□□□ -0.3
STRN3-207ENST00000555358 SPATA8Q6RVD6 105 aa13.09□□□□□ -0.31
STRN3-207ENST00000555358 TNXBP22105 4242 aa13.09□□□□□ -0.31
STRN3-207ENST00000555358 FLG2Q5D862 2391 aaPredicted RBP13.07□□□□□ -0.32
STRN3-207ENST00000555358 RPS29P62273 56 aaKnown RBP13.07□□□□□ -0.32
STRN3-207ENST00000555358 FAT3Q8TDW7 4589 aa13.03□□□□□ -0.32
STRN3-207ENST00000555358 Q8N1X5 172 aa13.03□□□□□ -0.32
STRN3-207ENST00000555358 UQCR11O14957 56 aa13□□□□□ -0.33
STRN3-207ENST00000555358 MIR22HGQ0VDD5 57 aa12.98□□□□□ -0.33
STRN3-207ENST00000555358 MYCBP2O75592 4640 aa12.97□□□□□ -0.33
STRN3-207ENST00000555358 KRTAP10-8P60410 259 aa12.97□□□□□ -0.33
STRN3-207ENST00000555358 DMBT1Q9UGM3 2413 aaPredicted RBP12.86□□□□□ -0.35
STRN3-207ENST00000555358 PRAC1Q96KF2 57 aa12.85□□□□□ -0.35
STRN3-207ENST00000555358 ADM2Q7Z4H4 148 aa12.84□□□□□ -0.35
STRN3-207ENST00000555358 KRTAP4-5Q9BYR2 181 aa12.84□□□□□ -0.35
STRN3-207ENST00000555358 MT1HL1P0DM35 61 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms