RNA–Protein interactions for RNA: ENST00000555172.5

KTN1-220, Transcript of kinectin 1, humanhuman

TSL 2

Gene KTN1, Length 1,985 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-220ENST00000555172 TENM1Q9UKZ4 2725 aa0.86□□□□□ -2.27
KTN1-220ENST00000555172 NF1P21359 2839 aa0.85□□□□□ -2.27
KTN1-220ENST00000555172 CHD7Q9P2D1 2997 aa0.85□□□□□ -2.27
KTN1-220ENST00000555172 ZNF469Q96JG9 3925 aaPredicted RBP0.85□□□□□ -2.27
KTN1-220ENST00000555172 MAP1BP46821 2468 aaKnown RBP0.84□□□□□ -2.27
KTN1-220ENST00000555172 SETXQ7Z333 2677 aaKnown RBP0.84□□□□□ -2.27
KTN1-220ENST00000555172 M0R2T5 61 aa0.83□□□□□ -2.28
KTN1-220ENST00000555172 RYR2Q92736 4967 aa0.83□□□□□ -2.28
KTN1-220ENST00000555172 SYNE1Q8NF91 8797 aaKnown RBP0.83□□□□□ -2.28
KTN1-220ENST00000555172 SPTBN5Q9NRC6 3674 aaKnown RBP0.83□□□□□ -2.28
KTN1-220ENST00000555172 H0YGG7 62 aa0.83□□□□□ -2.28
KTN1-220ENST00000555172 PRM1P04553 51 aa0.83□□□□□ -2.28
KTN1-220ENST00000555172 CLTCL1P53675 1640 aa0.83□□□□□ -2.28
KTN1-220ENST00000555172 U3KQA8 63 aa0.82□□□□□ -2.28
KTN1-220ENST00000555172 WNK1Q9H4A3 2382 aa0.82□□□□□ -2.28
KTN1-220ENST00000555172 NCOR2Q9Y618 2525 aa0.81□□□□□ -2.28
KTN1-220ENST00000555172 DMXL1Q9Y485 3027 aa0.81□□□□□ -2.28
KTN1-220ENST00000555172 CUBNO60494 3623 aa0.81□□□□□ -2.28
KTN1-220ENST00000555172 MDN1Q9NU22 5596 aa0.8□□□□□ -2.28
KTN1-220ENST00000555172 KALRNO60229 2985 aa0.8□□□□□ -2.28
KTN1-220ENST00000555172 DCHS2Q6V1P9 2916 aa0.8□□□□□ -2.28
KTN1-220ENST00000555172 RPL39P62891 51 aaKnown RBP0.8□□□□□ -2.28
KTN1-220ENST00000555172 DEFB131AP59861 70 aa0.79□□□□□ -2.28
KTN1-220ENST00000555172 KMT2CQ8NEZ4 4911 aaKnown RBP0.79□□□□□ -2.28
KTN1-220ENST00000555172 TNXBP22105 4242 aa0.79□□□□□ -2.28
KTN1-220ENST00000555172 KRTAP20-1Q3LI63 56 aa0.79□□□□□ -2.28
KTN1-220ENST00000555172 DUOX1Q9NRD9 1551 aa0.78□□□□□ -2.28
KTN1-220ENST00000555172 COL12A1Q99715 3063 aa0.78□□□□□ -2.28
KTN1-220ENST00000555172 HIVEP3Q5T1R4 2406 aa0.78□□□□□ -2.28
KTN1-220ENST00000555172 COL7A1Q02388 2944 aa0.78□□□□□ -2.29
KTN1-220ENST00000555172 USP9XQ93008 2570 aaPredicted RBP0.77□□□□□ -2.29
KTN1-220ENST00000555172 FLNCQ14315 2725 aa0.77□□□□□ -2.29
KTN1-220ENST00000555172 FRYQ5TBA9 3013 aa0.77□□□□□ -2.29
KTN1-220ENST00000555172 RANBP2P49792 3224 aaKnown RBP0.77□□□□□ -2.29
KTN1-220ENST00000555172 MROH2BQ7Z745 1585 aa0.77□□□□□ -2.29
KTN1-220ENST00000555172 NOP10Q9NPE3 64 aaKnown RBP0.77□□□□□ -2.29
KTN1-220ENST00000555172 KMT2DO14686 5537 aa0.77□□□□□ -2.29
KTN1-220ENST00000555172 GCN1Q92616 2671 aaKnown RBP0.76□□□□□ -2.29
KTN1-220ENST00000555172 APC2O95996 2303 aa0.76□□□□□ -2.29
KTN1-220ENST00000555172 RYR1P21817 5038 aa0.76□□□□□ -2.29
KTN1-220ENST00000555172 NSD1Q96L73 2696 aaPredicted RBP0.76□□□□□ -2.29
KTN1-220ENST00000555172 DMBT1Q9UGM3 2413 aaPredicted RBP0.76□□□□□ -2.29
KTN1-220ENST00000555172 MAST4O15021 2626 aa0.76□□□□□ -2.29
KTN1-220ENST00000555172 POLR2KP53803 58 aaKnown RBP0.76□□□□□ -2.29
KTN1-220ENST00000555172 TACC2O95359 2948 aa0.75□□□□□ -2.29
KTN1-220ENST00000555172 RPL39LQ96EH5 51 aaKnown RBP0.75□□□□□ -2.29
KTN1-220ENST00000555172 NAV2Q8IVL1 2488 aa0.75□□□□□ -2.29
KTN1-220ENST00000555172 ZFHX4Q86UP3 3567 aa0.75□□□□□ -2.29
KTN1-220ENST00000555172 SPTBN4Q9H254 2564 aa0.74□□□□□ -2.29
KTN1-220ENST00000555172 ACANP16112 2415 aa0.74□□□□□ -2.29
KTN1-220ENST00000555172 A8MTW9 85 aa0.74□□□□□ -2.29
KTN1-220ENST00000555172 PRKDCP78527 4128 aaKnown RBP0.74□□□□□ -2.29
KTN1-220ENST00000555172 LEAP2Q969E1 77 aa0.74□□□□□ -2.29
KTN1-220ENST00000555172 CLPSL2Q6UWE3 100 aa0.73□□□□□ -2.29
KTN1-220ENST00000555172 KMT2AQ03164 3969 aa0.73□□□□□ -2.29
KTN1-220ENST00000555172 HTTP42858 3142 aa0.73□□□□□ -2.29
KTN1-220ENST00000555172 HERC1Q15751 4861 aa0.73□□□□□ -2.29
KTN1-220ENST00000555172 NBEAL2Q6ZNJ1 2754 aa0.72□□□□□ -2.29
KTN1-220ENST00000555172 M0QY20 66 aa0.72□□□□□ -2.29
KTN1-220ENST00000555172 CCDC168Q8NDH2 2452 aa0.72□□□□□ -2.29
KTN1-220ENST00000555172 ABCA13Q86UQ4 5058 aa0.72□□□□□ -2.29
KTN1-220ENST00000555172 CRYBG3Q68DQ2 2970 aa0.71□□□□□ -2.3
KTN1-220ENST00000555172 SSPOA2VEC9 5147 aa0.71□□□□□ -2.3
KTN1-220ENST00000555172 RELNP78509 3460 aa0.7□□□□□ -2.3
KTN1-220ENST00000555172 FAT4Q6V0I7 4981 aa0.7□□□□□ -2.3
KTN1-220ENST00000555172 H3BNG1 76 aa0.7□□□□□ -2.3
KTN1-220ENST00000555172 UTP20O75691 2785 aaKnown RBP0.7□□□□□ -2.3
KTN1-220ENST00000555172 EPPK1P58107 5090 aaKnown RBP0.7□□□□□ -2.3
KTN1-220ENST00000555172 RIF1Q5UIP0 2472 aaKnown RBP0.7□□□□□ -2.3
KTN1-220ENST00000555172 LRRK2Q5S007 2527 aa0.69□□□□□ -2.3
KTN1-220ENST00000555172 GCC2Q8IWJ2 1684 aa0.69□□□□□ -2.3
KTN1-220ENST00000555172 VPS13BQ7Z7G8 4022 aa0.69□□□□□ -2.3
KTN1-220ENST00000555172 ACACAQ13085 2346 aa0.69□□□□□ -2.3
KTN1-220ENST00000555172 RYR3Q15413 4870 aa0.69□□□□□ -2.3
KTN1-220ENST00000555172 EPG5Q9HCE0 2579 aa0.68□□□□□ -2.3
KTN1-220ENST00000555172 HRNRQ86YZ3 2850 aaPredicted RBP0.68□□□□□ -2.3
KTN1-220ENST00000555172 SONP18583 2426 aaKnown RBP0.68□□□□□ -2.3
KTN1-220ENST00000555172 LRP1Q07954 4544 aaKnown RBP0.67□□□□□ -2.3
KTN1-220ENST00000555172 FLNBO75369 2602 aaKnown RBP0.67□□□□□ -2.3
KTN1-220ENST00000555172 ARHGAP5-AS1Q96IT6 56 aa0.67□□□□□ -2.3
KTN1-220ENST00000555172 DNAH11Q96DT5 4516 aa0.67□□□□□ -2.3
KTN1-220ENST00000555172 DOPEY1Q5JWR5 2465 aa0.67□□□□□ -2.3
KTN1-220ENST00000555172 KRTAP21-1Q3LI58 79 aa0.66□□□□□ -2.3
KTN1-220ENST00000555172 IGSF10Q6WRI0 2623 aa0.66□□□□□ -2.3
KTN1-220ENST00000555172 NBEAQ8NFP9 2946 aa0.66□□□□□ -2.3
KTN1-220ENST00000555172 LAMA5O15230 3695 aa0.66□□□□□ -2.3
KTN1-220ENST00000555172 MTORP42345 2549 aa0.66□□□□□ -2.3
KTN1-220ENST00000555172 MYO18BQ8IUG5 2567 aa0.65□□□□□ -2.31
KTN1-220ENST00000555172 KRTAP5-10Q6L8G5 202 aa0.65□□□□□ -2.31
KTN1-220ENST00000555172 MYCBP2O75592 4640 aa0.65□□□□□ -2.31
KTN1-220ENST00000555172 FLNAP21333 2647 aaKnown RBP0.65□□□□□ -2.31
KTN1-220ENST00000555172 CELSR3Q9NYQ7 3312 aa0.64□□□□□ -2.31
KTN1-220ENST00000555172 MUC16Q8WXI7 14507 aa0.64□□□□□ -2.31
KTN1-220ENST00000555172 TRIOO75962 3097 aa0.64□□□□□ -2.31
KTN1-220ENST00000555172 HECTD4Q9Y4D8 3996 aa0.64□□□□□ -2.31
KTN1-220ENST00000555172 HUWE1Q7Z6Z7 4374 aaKnown RBP0.64□□□□□ -2.31
KTN1-220ENST00000555172 NBPF19A0A087WUL8 3843 aa0.64□□□□□ -2.31
KTN1-220ENST00000555172 TOMM7Q9P0U1 55 aa0.64□□□□□ -2.31
KTN1-220ENST00000555172 FASNP49327 2511 aaKnown RBP0.64□□□□□ -2.31
KTN1-220ENST00000555172 ITPR3Q14573 2671 aa0.63□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms