RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 A0A096LNT2 108 aa1.94□□□□□ -2.1
SYNE2-212ENST00000554584 TENM2Q9NT68 2774 aa1.94□□□□□ -2.1
SYNE2-212ENST00000554584 KRTAP10-10P60014 251 aa1.94□□□□□ -2.1
SYNE2-212ENST00000554584 MMP24-AS1A0A0U1RRL7 71 aa1.93□□□□□ -2.1
SYNE2-212ENST00000554584 A8MUU9 505 aa1.93□□□□□ -2.1
SYNE2-212ENST00000554584 KRTAP11-1Q8IUC1 163 aa1.93□□□□□ -2.1
SYNE2-212ENST00000554584 A0A087X002 238 aa1.93□□□□□ -2.1
SYNE2-212ENST00000554584 NOTCH2NLQ7Z3S9 236 aa1.93□□□□□ -2.1
SYNE2-212ENST00000554584 ZZEF1O43149 2961 aa1.92□□□□□ -2.1
SYNE2-212ENST00000554584 MGAQ8IWI9 3026 aa1.92□□□□□ -2.1
SYNE2-212ENST00000554584 RPL37P61927 97 aaKnown RBP1.92□□□□□ -2.1
SYNE2-212ENST00000554584 PDZD2O15018 2839 aa1.92□□□□□ -2.1
SYNE2-212ENST00000554584 DCHS2Q6V1P9 2916 aa1.92□□□□□ -2.1
SYNE2-212ENST00000554584 PP632Q6XCG6 107 aa1.92□□□□□ -2.1
SYNE2-212ENST00000554584 A6NN06 94 aa1.92□□□□□ -2.1
SYNE2-212ENST00000554584 VWFP04275 2813 aa1.91□□□□□ -2.1
SYNE2-212ENST00000554584 FRYQ5TBA9 3013 aa1.91□□□□□ -2.1
SYNE2-212ENST00000554584 ASB16-AS1Q495Z4 193 aa1.91□□□□□ -2.1
SYNE2-212ENST00000554584 LINC00472Q9H8W2 130 aa1.9□□□□□ -2.11
SYNE2-212ENST00000554584 ZFHX4Q86UP3 3567 aa1.89□□□□□ -2.11
SYNE2-212ENST00000554584 SVEP1Q4LDE5 3571 aa1.89□□□□□ -2.11
SYNE2-212ENST00000554584 KRTAP25-1Q3LHN0 102 aa1.88□□□□□ -2.11
SYNE2-212ENST00000554584 EP400Q96L91 3159 aa1.88□□□□□ -2.11
SYNE2-212ENST00000554584 ADGRG4Q8IZF6 3080 aa1.88□□□□□ -2.11
SYNE2-212ENST00000554584 COL12A1Q99715 3063 aa1.88□□□□□ -2.11
SYNE2-212ENST00000554584 SMG1Q96Q15 3661 aaKnown RBP1.88□□□□□ -2.11
SYNE2-212ENST00000554584 CELSR3Q9NYQ7 3312 aa1.88□□□□□ -2.11
SYNE2-212ENST00000554584 ASPMQ8IZT6 3477 aa1.88□□□□□ -2.11
SYNE2-212ENST00000554584 KRTAP4-16G5E9R7 235 aaPredicted RBP1.87□□□□□ -2.11
SYNE2-212ENST00000554584 TNRC18O15417 2968 aaPredicted RBP1.87□□□□□ -2.11
SYNE2-212ENST00000554584 KRTAP26-1Q6PEX3 210 aa1.87□□□□□ -2.11
SYNE2-212ENST00000554584 TNP1P09430 55 aa1.86□□□□□ -2.11
SYNE2-212ENST00000554584 DMXL1Q9Y485 3027 aa1.86□□□□□ -2.11
SYNE2-212ENST00000554584 ATMQ13315 3056 aa1.86□□□□□ -2.11
SYNE2-212ENST00000554584 MKI67P46013 3256 aaKnown RBP1.85□□□□□ -2.11
SYNE2-212ENST00000554584 KRTAP19-4Q3LI73 84 aa1.85□□□□□ -2.11
SYNE2-212ENST00000554584 HTTP42858 3142 aa1.84□□□□□ -2.11
SYNE2-212ENST00000554584 RANBP2P49792 3224 aaKnown RBP1.84□□□□□ -2.11
SYNE2-212ENST00000554584 FBN2P35556 2912 aa1.84□□□□□ -2.11
SYNE2-212ENST00000554584 ZFHX3Q15911 3703 aa1.84□□□□□ -2.11
SYNE2-212ENST00000554584 FBN1P35555 2871 aaKnown RBP1.82□□□□□ -2.12
SYNE2-212ENST00000554584 SPRR1AP35321 89 aa1.82□□□□□ -2.12
SYNE2-212ENST00000554584 SPENQ96T58 3664 aaKnown RBP1.82□□□□□ -2.12
SYNE2-212ENST00000554584 VPS13AQ96RL7 3174 aa1.82□□□□□ -2.12
SYNE2-212ENST00000554584 KRTAP13-2Q52LG2 175 aa1.82□□□□□ -2.12
SYNE2-212ENST00000554584 KRTAP23-1A1A580 65 aa1.81□□□□□ -2.12
SYNE2-212ENST00000554584 COL7A1Q02388 2944 aa1.81□□□□□ -2.12
SYNE2-212ENST00000554584 RELNP78509 3460 aa1.81□□□□□ -2.12
SYNE2-212ENST00000554584 KRTAP29-1A8MX34 341 aaPredicted RBP1.81□□□□□ -2.12
SYNE2-212ENST00000554584 BOD1L1Q8NFC6 3051 aa1.8□□□□□ -2.12
SYNE2-212ENST00000554584 CFAP47Q6ZTR5 3102 aa1.8□□□□□ -2.12
SYNE2-212ENST00000554584 SPEGQ15772 3267 aa1.8□□□□□ -2.12
SYNE2-212ENST00000554584 NBPF19A0A087WUL8 3843 aa1.8□□□□□ -2.12
SYNE2-212ENST00000554584 WDFY4Q6ZS81 3184 aa1.79□□□□□ -2.12
SYNE2-212ENST00000554584 KRTAP12-2P59991 146 aa1.79□□□□□ -2.12
SYNE2-212ENST00000554584 LORP23490 312 aaPredicted RBP1.78□□□□□ -2.12
SYNE2-212ENST00000554584 CUBNO60494 3623 aa1.77□□□□□ -2.13
SYNE2-212ENST00000554584 LAMA5O15230 3695 aa1.76□□□□□ -2.13
SYNE2-212ENST00000554584 CSMD3Q7Z407 3707 aa1.75□□□□□ -2.13
SYNE2-212ENST00000554584 Q6ZRN7 208 aaPredicted RBP1.75□□□□□ -2.13
SYNE2-212ENST00000554584 COL6A3P12111 3177 aa1.75□□□□□ -2.13
SYNE2-212ENST00000554584 CSMD1Q96PZ7 3565 aa1.75□□□□□ -2.13
SYNE2-212ENST00000554584 LAMA1P25391 3075 aa1.75□□□□□ -2.13
SYNE2-212ENST00000554584 AKAP9Q99996 3911 aa1.74□□□□□ -2.13
SYNE2-212ENST00000554584 HRNRQ86YZ3 2850 aaPredicted RBP1.74□□□□□ -2.13
SYNE2-212ENST00000554584 OTOGQ6ZRI0 2925 aa1.74□□□□□ -2.13
SYNE2-212ENST00000554584 XP32Q5T750 250 aa1.74□□□□□ -2.13
SYNE2-212ENST00000554584 KRTAP7-1Q8IUC3 87 aa1.73□□□□□ -2.13
SYNE2-212ENST00000554584 DCHS1Q96JQ0 3298 aa1.73□□□□□ -2.13
SYNE2-212ENST00000554584 KRTAP15-1Q3LI76 137 aa1.73□□□□□ -2.13
SYNE2-212ENST00000554584 MT3P25713 68 aa1.72□□□□□ -2.13
SYNE2-212ENST00000554584 CELSR1Q9NYQ6 3014 aa1.72□□□□□ -2.13
SYNE2-212ENST00000554584 KRTAP4-5Q9BYR2 181 aa1.71□□□□□ -2.14
SYNE2-212ENST00000554584 H0YAA0 97 aa1.7□□□□□ -2.14
SYNE2-212ENST00000554584 FBN3Q75N90 2809 aa1.7□□□□□ -2.14
SYNE2-212ENST00000554584 PRO2289Q9P1D8 64 aa1.69□□□□□ -2.14
SYNE2-212ENST00000554584 MEGF8Q7Z7M0 2845 aa1.69□□□□□ -2.14
SYNE2-212ENST00000554584 KRTAP10-6P60371 365 aaPredicted RBP1.68□□□□□ -2.14
SYNE2-212ENST00000554584 RPS29P62273 56 aaKnown RBP1.67□□□□□ -2.14
SYNE2-212ENST00000554584 KRTAP10-5P60370 271 aa1.67□□□□□ -2.14
SYNE2-212ENST00000554584 VPS13CQ709C8 3753 aa1.67□□□□□ -2.14
SYNE2-212ENST00000554584 ALMS1Q8TCU4 4167 aa1.66□□□□□ -2.14
SYNE2-212ENST00000554584 LOC400499M0QZD8 3231 aa1.64□□□□□ -2.15
SYNE2-212ENST00000554584 TPRXLQ17RH7 258 aa1.64□□□□□ -2.15
SYNE2-212ENST00000554584 KRTAP13-1Q8IUC0 172 aa1.64□□□□□ -2.15
SYNE2-212ENST00000554584 INE1O15225 51 aa1.61□□□□□ -2.15
SYNE2-212ENST00000554584 TRRAPQ9Y4A5 3859 aa1.61□□□□□ -2.15
SYNE2-212ENST00000554584 EYSQ5T1H1 3165 aa1.6□□□□□ -2.15
SYNE2-212ENST00000554584 CSMD2Q7Z408 3487 aa1.6□□□□□ -2.15
SYNE2-212ENST00000554584 KRTAP1-4P0C5Y4 121 aa1.59□□□□□ -2.15
SYNE2-212ENST00000554584 KRTAP10-7P60409 375 aaPredicted RBP1.58□□□□□ -2.16
SYNE2-212ENST00000554584 KRTAP13-3Q3SY46 172 aa1.58□□□□□ -2.16
SYNE2-212ENST00000554584 KRTAP21-3Q3LHN1 58 aa1.56□□□□□ -2.16
SYNE2-212ENST00000554584 KRTAP13-4Q3LI77 160 aa1.55□□□□□ -2.16
SYNE2-212ENST00000554584 RYR1P21817 5038 aa1.55□□□□□ -2.16
SYNE2-212ENST00000554584 BSNQ9UPA5 3926 aa1.54□□□□□ -2.16
SYNE2-212ENST00000554584 KRTAP12-1P59990 96 aa1.54□□□□□ -2.16
SYNE2-212ENST00000554584 LYSTQ99698 3801 aa1.52□□□□□ -2.17
SYNE2-212ENST00000554584 DNHD1Q96M86 4753 aa1.51□□□□□ -2.17
SYNE2-212ENST00000554584 KRTAP8-1Q8IUC2 63 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms