RNA–Protein interactions for RNA: ENST00000554546.5

NUMB-212, Transcript of NUMB, endocytic adaptor protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NUMB, Length 3,607 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-212ENST00000554546 COL7A1Q02388 2944 aa6.44□□□□□ -1.38
NUMB-212ENST00000554546 A0A1B0GU33 70 aa6.44□□□□□ -1.38
NUMB-212ENST00000554546 C14orf177Q52M58 125 aa6.42□□□□□ -1.38
NUMB-212ENST00000554546 FAM208BQ5VWN6 2430 aa6.42□□□□□ -1.38
NUMB-212ENST00000554546 ANAPC11Q9NYG5 84 aa6.41□□□□□ -1.38
NUMB-212ENST00000554546 VWFP04275 2813 aa6.41□□□□□ -1.38
NUMB-212ENST00000554546 TPRXLQ17RH7 258 aa6.4□□□□□ -1.38
NUMB-212ENST00000554546 TYMSOSQ8TAI1 123 aa6.4□□□□□ -1.38
NUMB-212ENST00000554546 Q8N1X5 172 aa6.38□□□□□ -1.39
NUMB-212ENST00000554546 PDZD2O15018 2839 aa6.38□□□□□ -1.39
NUMB-212ENST00000554546 IGSF10Q6WRI0 2623 aa6.38□□□□□ -1.39
NUMB-212ENST00000554546 FLNCQ14315 2725 aa6.38□□□□□ -1.39
NUMB-212ENST00000554546 NBEAL1Q6ZS30 2694 aa6.37□□□□□ -1.39
NUMB-212ENST00000554546 NOTCH2Q04721 2471 aa6.37□□□□□ -1.39
NUMB-212ENST00000554546 C10orf95Q9H7T3 257 aa6.37□□□□□ -1.39
NUMB-212ENST00000554546 ANK3Q12955 4377 aaKnown RBP6.36□□□□□ -1.39
NUMB-212ENST00000554546 MYO18BQ8IUG5 2567 aa6.36□□□□□ -1.39
NUMB-212ENST00000554546 H1FX-AS1Q4G0G2 97 aa6.35□□□□□ -1.39
NUMB-212ENST00000554546 KRTAP10-3P60369 221 aa6.34□□□□□ -1.39
NUMB-212ENST00000554546 ZNF469Q96JG9 3925 aaPredicted RBP6.34□□□□□ -1.39
NUMB-212ENST00000554546 WWC2-AS2Q96NR7 200 aa6.33□□□□□ -1.4
NUMB-212ENST00000554546 ACANP16112 2415 aa6.33□□□□□ -1.4
NUMB-212ENST00000554546 KRTAP13-1Q8IUC0 172 aa6.33□□□□□ -1.4
NUMB-212ENST00000554546 ITPR3Q14573 2671 aa6.33□□□□□ -1.4
NUMB-212ENST00000554546 NBDYA0A0U1RRE5 68 aa6.31□□□□□ -1.4
NUMB-212ENST00000554546 DMBT1Q9UGM3 2413 aaPredicted RBP6.31□□□□□ -1.4
NUMB-212ENST00000554546 TEP1Q99973 2627 aaKnown RBP6.31□□□□□ -1.4
NUMB-212ENST00000554546 KRTAP10-9P60411 292 aa6.3□□□□□ -1.4
NUMB-212ENST00000554546 TENM4Q6N022 2769 aa6.3□□□□□ -1.4
NUMB-212ENST00000554546 CIRBP-AS1Q8TBR5 109 aa6.29□□□□□ -1.4
NUMB-212ENST00000554546 FASNP49327 2511 aaKnown RBP6.28□□□□□ -1.4
NUMB-212ENST00000554546 J3QKU1 62 aa6.26□□□□□ -1.41
NUMB-212ENST00000554546 MEGF8Q7Z7M0 2845 aa6.26□□□□□ -1.41
NUMB-212ENST00000554546 FLNAP21333 2647 aaKnown RBP6.26□□□□□ -1.41
NUMB-212ENST00000554546 TENM3Q9P273 2699 aa6.24□□□□□ -1.41
NUMB-212ENST00000554546 ATRQ13535 2644 aa6.24□□□□□ -1.41
NUMB-212ENST00000554546 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.24□□□□□ -1.41
NUMB-212ENST00000554546 NOTCH1P46531 2555 aa6.21□□□□□ -1.41
NUMB-212ENST00000554546 COX6B2Q6YFQ2 88 aa6.2□□□□□ -1.42
NUMB-212ENST00000554546 DNAH10Q8IVF4 4471 aa6.18□□□□□ -1.42
NUMB-212ENST00000554546 SEC61BP60468 96 aaKnown RBP6.17□□□□□ -1.42
NUMB-212ENST00000554546 RPL37P61927 97 aaKnown RBP6.17□□□□□ -1.42
NUMB-212ENST00000554546 TGP01266 2768 aa6.17□□□□□ -1.42
NUMB-212ENST00000554546 A0A0D9SG42 100 aa6.17□□□□□ -1.42
NUMB-212ENST00000554546 KRTAP1-5Q9BYS1 174 aa6.16□□□□□ -1.42
NUMB-212ENST00000554546 KRTAP1-3Q8IUG1 177 aa6.14□□□□□ -1.43
NUMB-212ENST00000554546 DNAH1Q9P2D7 4330 aa6.14□□□□□ -1.43
NUMB-212ENST00000554546 COL6A5A8TX70 2615 aa6.12□□□□□ -1.43
NUMB-212ENST00000554546 FLNBO75369 2602 aaKnown RBP6.12□□□□□ -1.43
NUMB-212ENST00000554546 ITPR2Q14571 2701 aa6.11□□□□□ -1.43
NUMB-212ENST00000554546 STAB2Q8WWQ8 2551 aa6.11□□□□□ -1.43
NUMB-212ENST00000554546 KRTAP24-1Q3LI83 254 aa6.09□□□□□ -1.43
NUMB-212ENST00000554546 TENM1Q9UKZ4 2725 aa6.09□□□□□ -1.43
NUMB-212ENST00000554546 APLNQ9ULZ1 77 aa6.08□□□□□ -1.44
NUMB-212ENST00000554546 LYSTQ99698 3801 aa6.07□□□□□ -1.44
NUMB-212ENST00000554546 KRTAP1-1Q07627 177 aa6.04□□□□□ -1.44
NUMB-212ENST00000554546 SPACA4Q8TDM5 124 aa6.02□□□□□ -1.45
NUMB-212ENST00000554546 KRTAP10-11P60412 298 aa6.01□□□□□ -1.45
NUMB-212ENST00000554546 KRTAP3-1Q9BYR8 98 aa6.01□□□□□ -1.45
NUMB-212ENST00000554546 NSD1Q96L73 2696 aaPredicted RBP6.01□□□□□ -1.45
NUMB-212ENST00000554546 FRAS1Q86XX4 4008 aa6.01□□□□□ -1.45
NUMB-212ENST00000554546 KRTAP13-4Q3LI77 160 aa6□□□□□ -1.45
NUMB-212ENST00000554546 MAST4O15021 2626 aa5.99□□□□□ -1.45
NUMB-212ENST00000554546 DNAH8Q96JB1 4490 aa5.99□□□□□ -1.45
NUMB-212ENST00000554546 UBE2DNLQ8IWF7 75 aa5.99□□□□□ -1.45
NUMB-212ENST00000554546 SMR3AQ99954 134 aa5.98□□□□□ -1.45
NUMB-212ENST00000554546 DNAH17Q9UFH2 4485 aa5.95□□□□□ -1.46
NUMB-212ENST00000554546 DNAH9Q9NYC9 4486 aa5.94□□□□□ -1.46
NUMB-212ENST00000554546 S4R3F8 94 aa5.94□□□□□ -1.46
NUMB-212ENST00000554546 ANK2Q01484 3957 aa5.9□□□□□ -1.46
NUMB-212ENST00000554546 KRTAP10-6P60371 365 aaPredicted RBP5.89□□□□□ -1.47
NUMB-212ENST00000554546 PLAC4Q8WY50 150 aa5.88□□□□□ -1.47
NUMB-212ENST00000554546 KRTAP12-2P59991 146 aa5.88□□□□□ -1.47
NUMB-212ENST00000554546 STAB1Q9NY15 2570 aa5.88□□□□□ -1.47
NUMB-212ENST00000554546 CMYA5Q8N3K9 4069 aa5.87□□□□□ -1.47
NUMB-212ENST00000554546 KRTAP13-2Q52LG2 175 aa5.86□□□□□ -1.47
NUMB-212ENST00000554546 XP32Q5T750 250 aa5.85□□□□□ -1.47
NUMB-212ENST00000554546 KRTAP3-2Q9BYR7 98 aa5.84□□□□□ -1.47
NUMB-212ENST00000554546 MGAM2Q2M2H8 2515 aa5.82□□□□□ -1.48
NUMB-212ENST00000554546 DNAH3Q8TD57 4116 aa5.79□□□□□ -1.48
NUMB-212ENST00000554546 Q6ZRN7 208 aaPredicted RBP5.78□□□□□ -1.48
NUMB-212ENST00000554546 FBN3Q75N90 2809 aa5.75□□□□□ -1.49
NUMB-212ENST00000554546 C9orf92A6NGG3 77 aa5.75□□□□□ -1.49
NUMB-212ENST00000554546 KRTAP12-1P59990 96 aa5.74□□□□□ -1.49
NUMB-212ENST00000554546 VPS13DQ5THJ4 4388 aa5.73□□□□□ -1.49
NUMB-212ENST00000554546 KMT2AQ03164 3969 aa5.7□□□□□ -1.5
NUMB-212ENST00000554546 J3QL48 77 aa5.7□□□□□ -1.5
NUMB-212ENST00000554546 CAMK2N1Q7Z7J9 78 aa5.7□□□□□ -1.5
NUMB-212ENST00000554546 KRTAP21-3Q3LHN1 58 aa5.68□□□□□ -1.5
NUMB-212ENST00000554546 KRTAP3-3Q9BYR6 98 aa5.67□□□□□ -1.5
NUMB-212ENST00000554546 HUWE1Q7Z6Z7 4374 aaKnown RBP5.65□□□□□ -1.5
NUMB-212ENST00000554546 DNAH7Q8WXX0 4024 aa5.65□□□□□ -1.51
NUMB-212ENST00000554546 KRTAP10-8P60410 259 aa5.64□□□□□ -1.51
NUMB-212ENST00000554546 KRTAP1-4P0C5Y4 121 aa5.6□□□□□ -1.51
NUMB-212ENST00000554546 HECTD4Q9Y4D8 3996 aa5.57□□□□□ -1.52
NUMB-212ENST00000554546 DNHD1Q96M86 4753 aa5.56□□□□□ -1.52
NUMB-212ENST00000554546 PRO2289Q9P1D8 64 aa5.53□□□□□ -1.52
NUMB-212ENST00000554546 PLECQ15149 4684 aaKnown RBP5.51□□□□□ -1.53
NUMB-212ENST00000554546 DNAH11Q96DT5 4516 aa5.48□□□□□ -1.53
NUMB-212ENST00000554546 DNAH2Q9P225 4427 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms