RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 A0A1B0GW54 56 aa12.29□□□□□ -0.44
NEK9-203ENST00000553945 PCP4L1A6NKN8 68 aa12.28□□□□□ -0.44
NEK9-203ENST00000553945 A8MUU9 505 aa12.28□□□□□ -0.44
NEK9-203ENST00000553945 J3KT08 172 aa12.26□□□□□ -0.45
NEK9-203ENST00000553945 NOTCH2NLQ7Z3S9 236 aa12.26□□□□□ -0.45
NEK9-203ENST00000553945 A0A1B0GVX0 72 aa12.24□□□□□ -0.45
NEK9-203ENST00000553945 KRTAP16-1A8MUX0 517 aa12.23□□□□□ -0.45
NEK9-203ENST00000553945 C8orf87E5RJ46 101 aa12.2□□□□□ -0.46
NEK9-203ENST00000553945 KRTAP19-2Q3LHN2 52 aa12.18□□□□□ -0.46
NEK9-203ENST00000553945 NREPQ16612 68 aa12.17□□□□□ -0.46
NEK9-203ENST00000553945 LCE2CQ5TA81 110 aa12.17□□□□□ -0.46
NEK9-203ENST00000553945 K7EP34 96 aa12.16□□□□□ -0.46
NEK9-203ENST00000553945 NDUFB1O75438 58 aa12.16□□□□□ -0.46
NEK9-203ENST00000553945 SMCPP49901 116 aaPredicted RBP12.16□□□□□ -0.46
NEK9-203ENST00000553945 A8MWP4 228 aa12.12□□□□□ -0.47
NEK9-203ENST00000553945 PRO0461Q9UI25 63 aa12.1□□□□□ -0.47
NEK9-203ENST00000553945 IGKV3D-7A0A0C4DH55 119 aa12.08□□□□□ -0.48
NEK9-203ENST00000553945 COX6B2Q6YFQ2 88 aa12.08□□□□□ -0.48
NEK9-203ENST00000553945 GTF2H5Q6ZYL4 71 aa12.06□□□□□ -0.48
NEK9-203ENST00000553945 C8orf17Q9NRJ1 99 aa12.05□□□□□ -0.48
NEK9-203ENST00000553945 MT1HP80294 61 aa12.02□□□□□ -0.49
NEK9-203ENST00000553945 PRR15Q8IV56 129 aa12.01□□□□□ -0.49
NEK9-203ENST00000553945 BPY2O14599 106 aa11.97□□□□□ -0.49
NEK9-203ENST00000553945 Q6ZVQ6 151 aa11.97□□□□□ -0.49
NEK9-203ENST00000553945 Q8N9P0 234 aaPredicted RBP11.96□□□□□ -0.49
NEK9-203ENST00000553945 F8W1H4 67 aa11.94□□□□□ -0.5
NEK9-203ENST00000553945 K7EQZ3 153 aa11.94□□□□□ -0.5
NEK9-203ENST00000553945 ZCCHC13Q8WW36 166 aaKnown RBP11.93□□□□□ -0.5
NEK9-203ENST00000553945 MMP24-AS1A0A0U1RRL7 71 aa11.91□□□□□ -0.5
NEK9-203ENST00000553945 FLGP20930 4061 aaPredicted RBP11.89□□□□□ -0.51
NEK9-203ENST00000553945 LINC00846Q9NV44 126 aa11.89□□□□□ -0.51
NEK9-203ENST00000553945 TMEM254Q8TBM7 123 aa11.88□□□□□ -0.51
NEK9-203ENST00000553945 M0R2T5 61 aa11.87□□□□□ -0.51
NEK9-203ENST00000553945 ETDBQ3ZM63 59 aa11.87□□□□□ -0.51
NEK9-203ENST00000553945 MRPL34Q9BQ48 92 aaKnown RBP11.86□□□□□ -0.51
NEK9-203ENST00000553945 UBL5Q9BZL1 73 aa11.86□□□□□ -0.51
NEK9-203ENST00000553945 hDV103S1A0JD37 113 aa11.85□□□□□ -0.51
NEK9-203ENST00000553945 Q8N9L7 120 aa11.84□□□□□ -0.51
NEK9-203ENST00000553945 HRES1P13985 223 aa11.81□□□□□ -0.52
NEK9-203ENST00000553945 NDUFS5O43920 106 aa11.79□□□□□ -0.52
NEK9-203ENST00000553945 FAM236DA0A1B0GTK5 79 aa11.78□□□□□ -0.52
NEK9-203ENST00000553945 FAM236CP0DP71 79 aa11.78□□□□□ -0.52
NEK9-203ENST00000553945 SPINK7P58062 85 aa11.78□□□□□ -0.52
NEK9-203ENST00000553945 KRTAP9-2Q9BYQ4 174 aa11.78□□□□□ -0.52
NEK9-203ENST00000553945 RBM12B-AS1Q9P1G2 102 aa11.78□□□□□ -0.52
NEK9-203ENST00000553945 WFDC13Q8IUB5 93 aa11.76□□□□□ -0.53
NEK9-203ENST00000553945 KRTAP10-6P60371 365 aaPredicted RBP11.74□□□□□ -0.53
NEK9-203ENST00000553945 CASC2Q6XLA1 102 aa11.74□□□□□ -0.53
NEK9-203ENST00000553945 MPLKIPQ8TAP9 179 aa11.74□□□□□ -0.53
NEK9-203ENST00000553945 LORP23490 312 aaPredicted RBP11.71□□□□□ -0.53
NEK9-203ENST00000553945 HCG22E2RYF7 251 aa11.65□□□□□ -0.54
NEK9-203ENST00000553945 CXCL6P80162 114 aa11.62□□□□□ -0.55
NEK9-203ENST00000553945 Q5W150 140 aa11.6□□□□□ -0.55
NEK9-203ENST00000553945 A0A1B0GV90 55 aa11.59□□□□□ -0.55
NEK9-203ENST00000553945 ACYP1P07311 99 aa11.58□□□□□ -0.56
NEK9-203ENST00000553945 LCE2DQ5TA82 110 aaPredicted RBP11.58□□□□□ -0.56
NEK9-203ENST00000553945 IGKV2D-30A0A075B6S6 120 aa11.54□□□□□ -0.56
NEK9-203ENST00000553945 IGKV2-30P06310 120 aa11.54□□□□□ -0.56
NEK9-203ENST00000553945 FAM240AA0A1B0GVK7 77 aa11.52□□□□□ -0.57
NEK9-203ENST00000553945 C7orf65Q6ZTY9 151 aa11.5□□□□□ -0.57
NEK9-203ENST00000553945 ATP5EP2Q5VTU8 51 aa11.41□□□□□ -0.58
NEK9-203ENST00000553945 KRTAP9-8Q9BYQ0 159 aa11.4□□□□□ -0.58
NEK9-203ENST00000553945 TP53AIP1Q9HCN2 124 aa11.4□□□□□ -0.58
NEK9-203ENST00000553945 HIST1H4AP62805 103 aaKnown RBP11.36□□□□□ -0.59
NEK9-203ENST00000553945 H1FX-AS1Q4G0G2 97 aa11.33□□□□□ -0.6
NEK9-203ENST00000553945 LINC00643Q86TS7 51 aa11.32□□□□□ -0.6
NEK9-203ENST00000553945 C4orf26Q17RF5 130 aa11.31□□□□□ -0.6
NEK9-203ENST00000553945 KRTAP9-6A0A140TA67 174 aa11.29□□□□□ -0.6
NEK9-203ENST00000553945 MT2AP02795 61 aa11.29□□□□□ -0.6
NEK9-203ENST00000553945 FSIP2Q5CZC0 6907 aa11.28□□□□□ -0.6
NEK9-203ENST00000553945 J3QR89 54 aa11.22□□□□□ -0.61
NEK9-203ENST00000553945 A0A087WVE0 104 aa11.21□□□□□ -0.61
NEK9-203ENST00000553945 MT1FP04733 61 aa11.2□□□□□ -0.62
NEK9-203ENST00000553945 KRTAP10-10P60014 251 aa11.19□□□□□ -0.62
NEK9-203ENST00000553945 TRAV22A0A0B4J277 110 aa11.18□□□□□ -0.62
NEK9-203ENST00000553945 CRCT1Q9UGL9 99 aa11.18□□□□□ -0.62
NEK9-203ENST00000553945 UQCRQO14949 82 aa11.13□□□□□ -0.63
NEK9-203ENST00000553945 C1orf64Q8NEQ6 169 aa11.13□□□□□ -0.63
NEK9-203ENST00000553945 CYP4F30PQ9H0H9 118 aa11.13□□□□□ -0.63
NEK9-203ENST00000553945 KRTAP3-1Q9BYR8 98 aa11.11□□□□□ -0.63
NEK9-203ENST00000553945 LOC101927531A0A1B0GV80 90 aa11.1□□□□□ -0.63
NEK9-203ENST00000553945 H0Y9P7 68 aa11.08□□□□□ -0.64
NEK9-203ENST00000553945 ATOX1O00244 68 aa11.04□□□□□ -0.64
NEK9-203ENST00000553945 KRTAP9-3Q9BYQ3 159 aa11.03□□□□□ -0.64
NEK9-203ENST00000553945 S4R3F8 94 aa11.01□□□□□ -0.65
NEK9-203ENST00000553945 USH2AO75445 5202 aa10.98□□□□□ -0.65
NEK9-203ENST00000553945 C5orf47Q569G3 176 aa10.98□□□□□ -0.65
NEK9-203ENST00000553945 OCR1Q9BZK8 76 aa10.96□□□□□ -0.65
NEK9-203ENST00000553945 LCE2BO14633 110 aa10.93□□□□□ -0.66
NEK9-203ENST00000553945 LCA10Q71F78 164 aa10.93□□□□□ -0.66
NEK9-203ENST00000553945 LINC00208Q96KT6 92 aa10.93□□□□□ -0.66
NEK9-203ENST00000553945 K7ERU9 68 aa10.91□□□□□ -0.66
NEK9-203ENST00000553945 MP68P56378 58 aa10.9□□□□□ -0.66
NEK9-203ENST00000553945 CSAG1Q6PB30 78 aa10.88□□□□□ -0.67
NEK9-203ENST00000553945 SCGB1A1P11684 91 aa10.87□□□□□ -0.67
NEK9-203ENST00000553945 SSPOA2VEC9 5147 aa10.83□□□□□ -0.68
NEK9-203ENST00000553945 KLKP1Q107X0 134 aa10.82□□□□□ -0.68
NEK9-203ENST00000553945 MT-ATP8P03928 68 aa10.81□□□□□ -0.68
NEK9-203ENST00000553945 IMUPQ9GZP8 106 aa10.81□□□□□ -0.68
NEK9-203ENST00000553945 KRTAP3-3Q9BYR6 98 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms