RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 A0A1B0GVX0 72 aa8.67□□□□□ -1.02
ACTN1-211ENST00000553882 CDK2AP2O75956 126 aa8.67□□□□□ -1.02
ACTN1-211ENST00000553882 Q1T7F1 81 aa8.67□□□□□ -1.02
ACTN1-211ENST00000553882 NOTCH2NLQ7Z3S9 236 aa8.67□□□□□ -1.02
ACTN1-211ENST00000553882 LY6G6CO95867 125 aa8.66□□□□□ -1.02
ACTN1-211ENST00000553882 SPINK6Q6UWN8 80 aa8.66□□□□□ -1.02
ACTN1-211ENST00000553882 SPANXA2-OT1Q8N9U9 137 aa8.66□□□□□ -1.02
ACTN1-211ENST00000553882 RBM12B-AS1Q9P1G2 102 aa8.66□□□□□ -1.02
ACTN1-211ENST00000553882 ASB16-AS1Q495Z4 193 aa8.65□□□□□ -1.02
ACTN1-211ENST00000553882 ALMS1Q8TCU4 4167 aa8.64□□□□□ -1.03
ACTN1-211ENST00000553882 DNAH11Q96DT5 4516 aa8.64□□□□□ -1.03
ACTN1-211ENST00000553882 CIRBP-AS1Q8TBR5 109 aa8.63□□□□□ -1.03
ACTN1-211ENST00000553882 IGLV7-43P04211 117 aa8.62□□□□□ -1.03
ACTN1-211ENST00000553882 TP53AIP1Q9HCN2 124 aa8.62□□□□□ -1.03
ACTN1-211ENST00000553882 DNAH5Q8TE73 4624 aa8.59□□□□□ -1.03
ACTN1-211ENST00000553882 MRPL34Q9BQ48 92 aaKnown RBP8.59□□□□□ -1.03
ACTN1-211ENST00000553882 A8MUN3 132 aa8.59□□□□□ -1.03
ACTN1-211ENST00000553882 KRTAP10-2P60368 255 aa8.58□□□□□ -1.04
ACTN1-211ENST00000553882 IGLV7-46A0A075B6I9 117 aa8.57□□□□□ -1.04
ACTN1-211ENST00000553882 C8orf87E5RJ46 101 aa8.57□□□□□ -1.04
ACTN1-211ENST00000553882 COA5Q86WW8 74 aa8.55□□□□□ -1.04
ACTN1-211ENST00000553882 Q8N9P0 234 aaPredicted RBP8.53□□□□□ -1.04
ACTN1-211ENST00000553882 A0A0A0MQY5 61 aa8.52□□□□□ -1.04
ACTN1-211ENST00000553882 HYDINQ4G0P3 5121 aa8.51□□□□□ -1.05
ACTN1-211ENST00000553882 LRP1BQ9NZR2 4599 aa8.51□□□□□ -1.05
ACTN1-211ENST00000553882 Q5W150 140 aa8.5□□□□□ -1.05
ACTN1-211ENST00000553882 Q5VV11 94 aa8.5□□□□□ -1.05
ACTN1-211ENST00000553882 PRR15LQ9BU68 103 aa8.48□□□□□ -1.05
ACTN1-211ENST00000553882 A8MU10 97 aa8.47□□□□□ -1.05
ACTN1-211ENST00000553882 PKD1P98161 4303 aa8.46□□□□□ -1.05
ACTN1-211ENST00000553882 SSBP3-AS1Q7Z2R9 100 aa8.46□□□□□ -1.05
ACTN1-211ENST00000553882 LIMD2Q9BT23 127 aa8.46□□□□□ -1.06
ACTN1-211ENST00000553882 VPS13BQ7Z7G8 4022 aa8.46□□□□□ -1.06
ACTN1-211ENST00000553882 KRTAP10-1P60331 282 aa8.45□□□□□ -1.06
ACTN1-211ENST00000553882 CHKB-CPT1BH3BT56 60 aa8.45□□□□□ -1.06
ACTN1-211ENST00000553882 FAT2Q9NYQ8 4349 aa8.44□□□□□ -1.06
ACTN1-211ENST00000553882 KRTAP13-2Q52LG2 175 aa8.44□□□□□ -1.06
ACTN1-211ENST00000553882 SPAG11AQ6PDA7 123 aa8.43□□□□□ -1.06
ACTN1-211ENST00000553882 KTN1-AS1Q86SY8 53 aa8.43□□□□□ -1.06
ACTN1-211ENST00000553882 HRES1P13985 223 aa8.42□□□□□ -1.06
ACTN1-211ENST00000553882 RETNLBQ9BQ08 111 aa8.42□□□□□ -1.06
ACTN1-211ENST00000553882 KRTAP13-3Q3SY46 172 aa8.41□□□□□ -1.06
ACTN1-211ENST00000553882 LOC101927531A0A1B0GV80 90 aa8.41□□□□□ -1.06
ACTN1-211ENST00000553882 LINC00313P59037 77 aa8.39□□□□□ -1.07
ACTN1-211ENST00000553882 Q6ZSA8 131 aa8.39□□□□□ -1.07
ACTN1-211ENST00000553882 PKHD1P08F94 4074 aa8.38□□□□□ -1.07
ACTN1-211ENST00000553882 A6NED7 52 aa8.33□□□□□ -1.08
ACTN1-211ENST00000553882 KRTAP1-4P0C5Y4 121 aa8.33□□□□□ -1.08
ACTN1-211ENST00000553882 Q75L30 129 aa8.33□□□□□ -1.08
ACTN1-211ENST00000553882 LINC01558Q9Y6Z2 57 aa8.3□□□□□ -1.08
ACTN1-211ENST00000553882 FAM229AH3BQW9 127 aa8.3□□□□□ -1.08
ACTN1-211ENST00000553882 PLA2G1BP04054 148 aaKnown RBP8.29□□□□□ -1.08
ACTN1-211ENST00000553882 LCA10Q71F78 164 aa8.29□□□□□ -1.08
ACTN1-211ENST00000553882 SPTSSBQ8NFR3 76 aa8.28□□□□□ -1.08
ACTN1-211ENST00000553882 KRTAP16-1A8MUX0 517 aa8.26□□□□□ -1.09
ACTN1-211ENST00000553882 ACYP2P14621 99 aa8.25□□□□□ -1.09
ACTN1-211ENST00000553882 TYMSOSQ8TAI1 123 aa8.25□□□□□ -1.09
ACTN1-211ENST00000553882 IGKV2-30P06310 120 aa8.23□□□□□ -1.09
ACTN1-211ENST00000553882 IGKV2D-30A0A075B6S6 120 aa8.22□□□□□ -1.09
ACTN1-211ENST00000553882 SPINK7P58062 85 aa8.22□□□□□ -1.09
ACTN1-211ENST00000553882 DMAC1Q96GE9 116 aa8.22□□□□□ -1.09
ACTN1-211ENST00000553882 CDC42SE1Q9NRR8 79 aa8.18□□□□□ -1.1
ACTN1-211ENST00000553882 SACSQ9NZJ4 4579 aa8.17□□□□□ -1.1
ACTN1-211ENST00000553882 SPINK1P00995 79 aa8.16□□□□□ -1.1
ACTN1-211ENST00000553882 SMR3BP02814 79 aaPredicted RBP8.16□□□□□ -1.1
ACTN1-211ENST00000553882 ATP11AUNQ6ZP68 121 aa8.15□□□□□ -1.1
ACTN1-211ENST00000553882 FAT1Q14517 4588 aa8.13□□□□□ -1.11
ACTN1-211ENST00000553882 LINC00304Q8N9R0 145 aa8.11□□□□□ -1.11
ACTN1-211ENST00000553882 DYNC1H1Q14204 4646 aaKnown RBP8.09□□□□□ -1.11
ACTN1-211ENST00000553882 C7orf65Q6ZTY9 151 aa8.09□□□□□ -1.11
ACTN1-211ENST00000553882 A0A1B0GU69 56 aa8.07□□□□□ -1.12
ACTN1-211ENST00000553882 A6NN06 94 aa8.05□□□□□ -1.12
ACTN1-211ENST00000553882 C9orf92A6NGG3 77 aa8.03□□□□□ -1.12
ACTN1-211ENST00000553882 Q8N1X5 172 aa8.03□□□□□ -1.12
ACTN1-211ENST00000553882 LINC01554Q52M75 96 aa8.02□□□□□ -1.13
ACTN1-211ENST00000553882 APOBP04114 4563 aaKnown RBP8□□□□□ -1.13
ACTN1-211ENST00000553882 RPS29P62273 56 aaKnown RBP7.98□□□□□ -1.13
ACTN1-211ENST00000553882 PKHD1L1Q86WI1 4243 aa7.94□□□□□ -1.14
ACTN1-211ENST00000553882 A0A1B0GVY2 172 aa7.93□□□□□ -1.14
ACTN1-211ENST00000553882 KRTAP10-4P60372 401 aaPredicted RBP7.93□□□□□ -1.14
ACTN1-211ENST00000553882 KMT2CQ8NEZ4 4911 aaKnown RBP7.92□□□□□ -1.14
ACTN1-211ENST00000553882 KRTAP21-3Q3LHN1 58 aa7.91□□□□□ -1.14
ACTN1-211ENST00000553882 UQCR11O14957 56 aa7.89□□□□□ -1.15
ACTN1-211ENST00000553882 MIR22HGQ0VDD5 57 aa7.89□□□□□ -1.15
ACTN1-211ENST00000553882 C20orf166-AS1Q96NR2 134 aa7.88□□□□□ -1.15
ACTN1-211ENST00000553882 A8MUU9 505 aa7.87□□□□□ -1.15
ACTN1-211ENST00000553882 J3QL48 77 aa7.87□□□□□ -1.15
ACTN1-211ENST00000553882 SPATA8Q6RVD6 105 aa7.87□□□□□ -1.15
ACTN1-211ENST00000553882 RYR2Q92736 4967 aa7.86□□□□□ -1.15
ACTN1-211ENST00000553882 FLG2Q5D862 2391 aaPredicted RBP7.85□□□□□ -1.15
ACTN1-211ENST00000553882 LRP1Q07954 4544 aaKnown RBP7.84□□□□□ -1.15
ACTN1-211ENST00000553882 KRTAP3-1Q9BYR8 98 aa7.81□□□□□ -1.16
ACTN1-211ENST00000553882 ADM2Q7Z4H4 148 aa7.77□□□□□ -1.17
ACTN1-211ENST00000553882 PRAC1Q96KF2 57 aa7.77□□□□□ -1.17
ACTN1-211ENST00000553882 DMBT1Q9UGM3 2413 aaPredicted RBP7.76□□□□□ -1.17
ACTN1-211ENST00000553882 TNXBP22105 4242 aa7.73□□□□□ -1.17
ACTN1-211ENST00000553882 MYCBP2O75592 4640 aa7.71□□□□□ -1.17
ACTN1-211ENST00000553882 FAT3Q8TDW7 4589 aa7.71□□□□□ -1.18
ACTN1-211ENST00000553882 HSPG2P98160 4391 aa7.7□□□□□ -1.18
ACTN1-211ENST00000553882 H0YAA0 97 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms