RNA–Protein interactions for RNA: ENST00000553624.5

KTN1-210, Transcript of kinectin 1, humanhuman

TSL 5

Gene KTN1, Length 731 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-210ENST00000553624 CEP290O15078 2479 aa0.58□□□□□ -2.32
KTN1-210ENST00000553624 SYNE2Q8WXH0 6885 aaKnown RBP0.57□□□□□ -2.32
KTN1-210ENST00000553624 TNRC18O15417 2968 aaPredicted RBP0.57□□□□□ -2.32
KTN1-210ENST00000553624 CREBBPQ92793 2442 aa0.55□□□□□ -2.32
KTN1-210ENST00000553624 PKD1L2Q7Z442 2459 aa0.55□□□□□ -2.32
KTN1-210ENST00000553624 LPAP08519 4548 aa0.54□□□□□ -2.32
KTN1-210ENST00000553624 NAV2Q8IVL1 2488 aa0.54□□□□□ -2.32
KTN1-210ENST00000553624 UBR5O95071 2799 aaPredicted RBP0.54□□□□□ -2.32
KTN1-210ENST00000553624 ACANP16112 2415 aa0.53□□□□□ -2.32
KTN1-210ENST00000553624 H3BNG1 76 aa0.53□□□□□ -2.32
KTN1-210ENST00000553624 M0QZ58 72 aa0.53□□□□□ -2.32
KTN1-210ENST00000553624 FSIP2Q5CZC0 6907 aa0.52□□□□□ -2.33
KTN1-210ENST00000553624 HIVEP3Q5T1R4 2406 aa0.52□□□□□ -2.33
KTN1-210ENST00000553624 MAP1BP46821 2468 aaKnown RBP0.52□□□□□ -2.33
KTN1-210ENST00000553624 A0A0C4DFX4 3053 aa0.51□□□□□ -2.33
KTN1-210ENST00000553624 LYSTQ99698 3801 aa0.51□□□□□ -2.33
KTN1-210ENST00000553624 HRNRQ86YZ3 2850 aaPredicted RBP0.51□□□□□ -2.33
KTN1-210ENST00000553624 KMT2AQ03164 3969 aa0.5□□□□□ -2.33
KTN1-210ENST00000553624 CACNA1AO00555 2505 aa0.5□□□□□ -2.33
KTN1-210ENST00000553624 NCOR2Q9Y618 2525 aa0.5□□□□□ -2.33
KTN1-210ENST00000553624 NBASA2RRP1 2371 aa0.49□□□□□ -2.33
KTN1-210ENST00000553624 TNP1P09430 55 aa0.49□□□□□ -2.33
KTN1-210ENST00000553624 CLPSL2Q6UWE3 100 aa0.49□□□□□ -2.33
KTN1-210ENST00000553624 SETXQ7Z333 2677 aaKnown RBP0.49□□□□□ -2.33
KTN1-210ENST00000553624 POLR2KP53803 58 aaKnown RBP0.48□□□□□ -2.33
KTN1-210ENST00000553624 VPS13BQ7Z7G8 4022 aa0.48□□□□□ -2.33
KTN1-210ENST00000553624 WNK1Q9H4A3 2382 aa0.46□□□□□ -2.34
KTN1-210ENST00000553624 APC2O95996 2303 aa0.46□□□□□ -2.34
KTN1-210ENST00000553624 SPRR2AP35326 72 aa0.46□□□□□ -2.34
KTN1-210ENST00000553624 SACSQ9NZJ4 4579 aa0.46□□□□□ -2.34
KTN1-210ENST00000553624 PHGR1C9JFL3 82 aa0.45□□□□□ -2.34
KTN1-210ENST00000553624 STAB1Q9NY15 2570 aa0.45□□□□□ -2.34
KTN1-210ENST00000553624 PKD1P98161 4303 aa0.44□□□□□ -2.34
KTN1-210ENST00000553624 NSD1Q96L73 2696 aaPredicted RBP0.43□□□□□ -2.34
KTN1-210ENST00000553624 RPL39P62891 51 aaKnown RBP0.43□□□□□ -2.34
KTN1-210ENST00000553624 PDZD2O15018 2839 aa0.43□□□□□ -2.34
KTN1-210ENST00000553624 FAT4Q6V0I7 4981 aa0.43□□□□□ -2.34
KTN1-210ENST00000553624 DEFB110Q30KQ9 67 aa0.42□□□□□ -2.34
KTN1-210ENST00000553624 KRTAP6-2Q3LI66 62 aa0.42□□□□□ -2.34
KTN1-210ENST00000553624 FLNBO75369 2602 aaKnown RBP0.41□□□□□ -2.34
KTN1-210ENST00000553624 SPTBN4Q9H254 2564 aa0.41□□□□□ -2.34
KTN1-210ENST00000553624 NF1P21359 2839 aa0.41□□□□□ -2.34
KTN1-210ENST00000553624 MT1AP04731 61 aa0.4□□□□□ -2.35
KTN1-210ENST00000553624 SETD2Q9BYW2 2564 aaPredicted RBP0.4□□□□□ -2.35
KTN1-210ENST00000553624 SRRM2Q9UQ35 2752 aaKnown RBP0.4□□□□□ -2.35
KTN1-210ENST00000553624 FLNCQ14315 2725 aa0.39□□□□□ -2.35
KTN1-210ENST00000553624 HSPG2P98160 4391 aa0.39□□□□□ -2.35
KTN1-210ENST00000553624 ANK3Q12955 4377 aaKnown RBP0.39□□□□□ -2.35
KTN1-210ENST00000553624 CUBNO60494 3623 aa0.39□□□□□ -2.35
KTN1-210ENST00000553624 DNAH11Q96DT5 4516 aa0.39□□□□□ -2.35
KTN1-210ENST00000553624 DNAH3Q8TD57 4116 aa0.39□□□□□ -2.35
KTN1-210ENST00000553624 LRP1BQ9NZR2 4599 aa0.38□□□□□ -2.35
KTN1-210ENST00000553624 GCN1Q92616 2671 aaKnown RBP0.38□□□□□ -2.35
KTN1-210ENST00000553624 IGSF10Q6WRI0 2623 aa0.38□□□□□ -2.35
KTN1-210ENST00000553624 SONP18583 2426 aaKnown RBP0.38□□□□□ -2.35
KTN1-210ENST00000553624 KMT2DO14686 5537 aa0.38□□□□□ -2.35
KTN1-210ENST00000553624 MDN1Q9NU22 5596 aa0.38□□□□□ -2.35
KTN1-210ENST00000553624 COL7A1Q02388 2944 aa0.37□□□□□ -2.35
KTN1-210ENST00000553624 HMCN2Q8NDA2 5059 aa0.37□□□□□ -2.35
KTN1-210ENST00000553624 HECTD4Q9Y4D8 3996 aa0.37□□□□□ -2.35
KTN1-210ENST00000553624 RPL39LQ96EH5 51 aaKnown RBP0.37□□□□□ -2.35
KTN1-210ENST00000553624 PKHD1L1Q86WI1 4243 aa0.37□□□□□ -2.35
KTN1-210ENST00000553624 ZZEF1O43149 2961 aa0.36□□□□□ -2.35
KTN1-210ENST00000553624 MAST4O15021 2626 aa0.35□□□□□ -2.35
KTN1-210ENST00000553624 SPRR2EP22531 72 aa0.35□□□□□ -2.35
KTN1-210ENST00000553624 MTORP42345 2549 aa0.35□□□□□ -2.35
KTN1-210ENST00000553624 COL6A5A8TX70 2615 aa0.34□□□□□ -2.36
KTN1-210ENST00000553624 KRTAP8-1Q8IUC2 63 aa0.34□□□□□ -2.36
KTN1-210ENST00000553624 COL6A3P12111 3177 aa0.33□□□□□ -2.36
KTN1-210ENST00000553624 TACC2O95359 2948 aa0.33□□□□□ -2.36
KTN1-210ENST00000553624 PKHD1P08F94 4074 aa0.32□□□□□ -2.36
KTN1-210ENST00000553624 DNAH2Q9P225 4427 aa0.32□□□□□ -2.36
KTN1-210ENST00000553624 ACACAQ13085 2346 aa0.32□□□□□ -2.36
KTN1-210ENST00000553624 DNAH9Q9NYC9 4486 aa0.32□□□□□ -2.36
KTN1-210ENST00000553624 DMXL1Q9Y485 3027 aa0.32□□□□□ -2.36
KTN1-210ENST00000553624 FLGP20930 4061 aaPredicted RBP0.31□□□□□ -2.36
KTN1-210ENST00000553624 FAT3Q8TDW7 4589 aa0.31□□□□□ -2.36
KTN1-210ENST00000553624 SPRR2FQ96RM1 72 aa0.31□□□□□ -2.36
KTN1-210ENST00000553624 DCHS2Q6V1P9 2916 aa0.31□□□□□ -2.36
KTN1-210ENST00000553624 ANKRD11Q6UB99 2663 aaPredicted RBP0.31□□□□□ -2.36
KTN1-210ENST00000553624 TOMM7Q9P0U1 55 aa0.3□□□□□ -2.36
KTN1-210ENST00000553624 DMBT1Q9UGM3 2413 aaPredicted RBP0.3□□□□□ -2.36
KTN1-210ENST00000553624 RANBP2P49792 3224 aaKnown RBP0.3□□□□□ -2.36
KTN1-210ENST00000553624 APOBP04114 4563 aaKnown RBP0.3□□□□□ -2.36
KTN1-210ENST00000553624 VPS13DQ5THJ4 4388 aa0.29□□□□□ -2.36
KTN1-210ENST00000553624 SPENQ96T58 3664 aaKnown RBP0.29□□□□□ -2.36
KTN1-210ENST00000553624 ZANQ9Y493 2812 aa0.29□□□□□ -2.36
KTN1-210ENST00000553624 DYNC2H1Q8NCM8 4307 aaKnown RBP0.29□□□□□ -2.36
KTN1-210ENST00000553624 ANKHD1Q8IWZ3 2542 aaKnown RBP0.28□□□□□ -2.36
KTN1-210ENST00000553624 SVEP1Q4LDE5 3571 aa0.28□□□□□ -2.36
KTN1-210ENST00000553624 LEAP2Q969E1 77 aa0.28□□□□□ -2.36
KTN1-210ENST00000553624 SPART-AS1P0CW21 52 aa0.27□□□□□ -2.37
KTN1-210ENST00000553624 ACACBO00763 2458 aa0.26□□□□□ -2.37
KTN1-210ENST00000553624 KRTAP19-5Q3LI72 72 aa0.26□□□□□ -2.37
KTN1-210ENST00000553624 SSPOA2VEC9 5147 aa0.25□□□□□ -2.37
KTN1-210ENST00000553624 LRP2P98164 4655 aa0.25□□□□□ -2.37
KTN1-210ENST00000553624 LRRK2Q5S007 2527 aa0.25□□□□□ -2.37
KTN1-210ENST00000553624 DNAH6Q9C0G6 4158 aa0.24□□□□□ -2.37
KTN1-210ENST00000553624 TEP1Q99973 2627 aaKnown RBP0.24□□□□□ -2.37
KTN1-210ENST00000553624 RIF1Q5UIP0 2472 aaKnown RBP0.24□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms