RNA–Protein interactions for RNA: ENST00000553486.5

ABCD4-218, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,842 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-218ENST00000553486 H7BZZ5 65 aa9.05□□□□□ -0.96
ABCD4-218ENST00000553486 CD164Q04900 197 aa9.05□□□□□ -0.96
ABCD4-218ENST00000553486 CASC2Q6XLA1 102 aa9.05□□□□□ -0.96
ABCD4-218ENST00000553486 KRTAP29-1A8MX34 341 aaPredicted RBP9.04□□□□□ -0.96
ABCD4-218ENST00000553486 J3QL48 77 aa9.04□□□□□ -0.96
ABCD4-218ENST00000553486 A0A0U1RQV1 116 aa9.03□□□□□ -0.96
ABCD4-218ENST00000553486 FAM229BQ4G0N7 80 aa9.02□□□□□ -0.97
ABCD4-218ENST00000553486 C5orf47Q569G3 176 aa9.02□□□□□ -0.97
ABCD4-218ENST00000553486 FAM236DA0A1B0GTK5 79 aa8.99□□□□□ -0.97
ABCD4-218ENST00000553486 FAM236CP0DP71 79 aa8.99□□□□□ -0.97
ABCD4-218ENST00000553486 MMP24-AS1A0A0U1RRL7 71 aa8.98□□□□□ -0.97
ABCD4-218ENST00000553486 LRP1Q07954 4544 aaKnown RBP8.98□□□□□ -0.97
ABCD4-218ENST00000553486 RPS28P62857 69 aaKnown RBP8.98□□□□□ -0.97
ABCD4-218ENST00000553486 A0A1B0GVX0 72 aa8.96□□□□□ -0.97
ABCD4-218ENST00000553486 hDV103S1A0JD37 113 aa8.96□□□□□ -0.97
ABCD4-218ENST00000553486 KRTAP10-4P60372 401 aaPredicted RBP8.96□□□□□ -0.97
ABCD4-218ENST00000553486 A0A087X002 238 aa8.96□□□□□ -0.98
ABCD4-218ENST00000553486 KRTAP13-2Q52LG2 175 aa8.95□□□□□ -0.98
ABCD4-218ENST00000553486 C8orf17Q9NRJ1 99 aa8.95□□□□□ -0.98
ABCD4-218ENST00000553486 ASB16-AS1Q495Z4 193 aa8.94□□□□□ -0.98
ABCD4-218ENST00000553486 IGHV6-1A0A0B4J1U7 121 aa8.94□□□□□ -0.98
ABCD4-218ENST00000553486 ATP5EP56381 51 aaPredicted RBP8.94□□□□□ -0.98
ABCD4-218ENST00000553486 KRTAP1-4P0C5Y4 121 aa8.93□□□□□ -0.98
ABCD4-218ENST00000553486 MP68P56378 58 aa8.93□□□□□ -0.98
ABCD4-218ENST00000553486 HMCN2Q8NDA2 5059 aa8.93□□□□□ -0.98
ABCD4-218ENST00000553486 ZCCHC13Q8WW36 166 aaKnown RBP8.91□□□□□ -0.98
ABCD4-218ENST00000553486 SPINK6Q6UWN8 80 aa8.91□□□□□ -0.98
ABCD4-218ENST00000553486 FAT3Q8TDW7 4589 aa8.9□□□□□ -0.98
ABCD4-218ENST00000553486 H3BPC8 53 aa8.89□□□□□ -0.99
ABCD4-218ENST00000553486 OXTP01178 125 aa8.89□□□□□ -0.99
ABCD4-218ENST00000553486 Q5XG85 94 aa8.89□□□□□ -0.99
ABCD4-218ENST00000553486 TP53AIP1Q9HCN2 124 aa8.88□□□□□ -0.99
ABCD4-218ENST00000553486 H0Y9P7 68 aa8.87□□□□□ -0.99
ABCD4-218ENST00000553486 SERP1Q9Y6X1 66 aa8.87□□□□□ -0.99
ABCD4-218ENST00000553486 LINC00208Q96KT6 92 aa8.85□□□□□ -0.99
ABCD4-218ENST00000553486 MRPL34Q9BQ48 92 aaKnown RBP8.85□□□□□ -0.99
ABCD4-218ENST00000553486 LIMD2Q9BT23 127 aa8.85□□□□□ -0.99
ABCD4-218ENST00000553486 TYMSOSQ8TAI1 123 aa8.84□□□□□ -0.99
ABCD4-218ENST00000553486 UBR4Q5T4S7 5183 aa8.84□□□□□ -0.99
ABCD4-218ENST00000553486 C4orf48Q5BLP8 95 aa8.84□□□□□ -0.99
ABCD4-218ENST00000553486 TRAV22A0A0B4J277 110 aa8.83□□□□□ -1
ABCD4-218ENST00000553486 C8orf87E5RJ46 101 aa8.83□□□□□ -1
ABCD4-218ENST00000553486 PKHD1L1Q86WI1 4243 aa8.83□□□□□ -1
ABCD4-218ENST00000553486 NDUFS5O43920 106 aa8.82□□□□□ -1
ABCD4-218ENST00000553486 NOTCH2NLQ7Z3S9 236 aa8.82□□□□□ -1
ABCD4-218ENST00000553486 C1orf195Q5TG92 126 aa8.81□□□□□ -1
ABCD4-218ENST00000553486 C1orf64Q8NEQ6 169 aa8.8□□□□□ -1
ABCD4-218ENST00000553486 SPINK1P00995 79 aa8.78□□□□□ -1
ABCD4-218ENST00000553486 LINC00313P59037 77 aa8.75□□□□□ -1.01
ABCD4-218ENST00000553486 PRR26Q8N8Z3 221 aa8.74□□□□□ -1.01
ABCD4-218ENST00000553486 MT1HL1P0DM35 61 aa8.73□□□□□ -1.01
ABCD4-218ENST00000553486 SPAG11AQ6PDA7 123 aa8.73□□□□□ -1.01
ABCD4-218ENST00000553486 LINC00304Q8N9R0 145 aa8.73□□□□□ -1.01
ABCD4-218ENST00000553486 RPS29P62273 56 aaKnown RBP8.72□□□□□ -1.01
ABCD4-218ENST00000553486 CYP4F30PQ9H0H9 118 aa8.71□□□□□ -1.01
ABCD4-218ENST00000553486 SPANXA2-OT1Q8N9U9 137 aa8.7□□□□□ -1.02
ABCD4-218ENST00000553486 SMIM26A0A096LP01 95 aa8.68□□□□□ -1.02
ABCD4-218ENST00000553486 TNXBP22105 4242 aa8.66□□□□□ -1.02
ABCD4-218ENST00000553486 Q8N9P0 234 aaPredicted RBP8.66□□□□□ -1.02
ABCD4-218ENST00000553486 PRR4Q16378 134 aa8.65□□□□□ -1.02
ABCD4-218ENST00000553486 LRP2P98164 4655 aa8.65□□□□□ -1.03
ABCD4-218ENST00000553486 LOC101927531A0A1B0GV80 90 aa8.63□□□□□ -1.03
ABCD4-218ENST00000553486 Q5W150 140 aa8.63□□□□□ -1.03
ABCD4-218ENST00000553486 KRTAP13-3Q3SY46 172 aa8.62□□□□□ -1.03
ABCD4-218ENST00000553486 KRTAP16-1A8MUX0 517 aa8.61□□□□□ -1.03
ABCD4-218ENST00000553486 PCOTHQ58A44 107 aa8.61□□□□□ -1.03
ABCD4-218ENST00000553486 IGLV7-46A0A075B6I9 117 aa8.61□□□□□ -1.03
ABCD4-218ENST00000553486 RNF213Q63HN8 5207 aa8.6□□□□□ -1.03
ABCD4-218ENST00000553486 FP248Q71RG6 208 aaPredicted RBP8.57□□□□□ -1.04
ABCD4-218ENST00000553486 C4orf26Q17RF5 130 aa8.54□□□□□ -1.04
ABCD4-218ENST00000553486 RETNLBQ9BQ08 111 aa8.52□□□□□ -1.05
ABCD4-218ENST00000553486 KRTAP10-8P60410 259 aa8.51□□□□□ -1.05
ABCD4-218ENST00000553486 IGKV2-30P06310 120 aa8.48□□□□□ -1.05
ABCD4-218ENST00000553486 MPLKIPQ8TAP9 179 aa8.47□□□□□ -1.05
ABCD4-218ENST00000553486 COA5Q86WW8 74 aa8.45□□□□□ -1.06
ABCD4-218ENST00000553486 Q1T7F1 81 aa8.43□□□□□ -1.06
ABCD4-218ENST00000553486 HRES1P13985 223 aa8.42□□□□□ -1.06
ABCD4-218ENST00000553486 C9orf92A6NGG3 77 aa8.4□□□□□ -1.06
ABCD4-218ENST00000553486 V9GYY9 64 aa8.4□□□□□ -1.06
ABCD4-218ENST00000553486 IGKV2D-30A0A075B6S6 120 aa8.39□□□□□ -1.07
ABCD4-218ENST00000553486 A8MUU9 505 aa8.38□□□□□ -1.07
ABCD4-218ENST00000553486 C20orf166-AS1Q96NR2 134 aa8.38□□□□□ -1.07
ABCD4-218ENST00000553486 ACYP2P14621 99 aa8.37□□□□□ -1.07
ABCD4-218ENST00000553486 LPAP08519 4548 aa8.36□□□□□ -1.07
ABCD4-218ENST00000553486 DMAC1Q96GE9 116 aa8.35□□□□□ -1.07
ABCD4-218ENST00000553486 C7orf65Q6ZTY9 151 aa8.33□□□□□ -1.08
ABCD4-218ENST00000553486 PSPHP1O15172 72 aa8.26□□□□□ -1.09
ABCD4-218ENST00000553486 Q75L30 129 aa8.26□□□□□ -1.09
ABCD4-218ENST00000553486 CHKB-CPT1BH3BT56 60 aa8.25□□□□□ -1.09
ABCD4-218ENST00000553486 MUC2Q02817 5179 aa8.25□□□□□ -1.09
ABCD4-218ENST00000553486 A8MUN3 132 aa8.23□□□□□ -1.09
ABCD4-218ENST00000553486 LINC01558Q9Y6Z2 57 aa8.22□□□□□ -1.09
ABCD4-218ENST00000553486 PRR15LQ9BU68 103 aa8.2□□□□□ -1.1
ABCD4-218ENST00000553486 Q5VV11 94 aa8.18□□□□□ -1.1
ABCD4-218ENST00000553486 BRK1Q8WUW1 75 aa8.17□□□□□ -1.1
ABCD4-218ENST00000553486 SPINK7P58062 85 aa8.16□□□□□ -1.1
ABCD4-218ENST00000553486 SVIPQ8NHG7 77 aa8.16□□□□□ -1.1
ABCD4-218ENST00000553486 ATP11AUNQ6ZP68 121 aa8.15□□□□□ -1.11
ABCD4-218ENST00000553486 PRO0628Q9UI54 55 aa8.13□□□□□ -1.11
ABCD4-218ENST00000553486 RPL37P61927 97 aaKnown RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms