RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 A0A1B0GVX0 72 aa7.71□□□□□ -1.18
SHMT2-205ENST00000553474 C1orf64Q8NEQ6 169 aa7.71□□□□□ -1.18
SHMT2-205ENST00000553474 C8orf17Q9NRJ1 99 aa7.71□□□□□ -1.18
SHMT2-205ENST00000553474 RBM12B-AS1Q9P1G2 102 aa7.71□□□□□ -1.18
SHMT2-205ENST00000553474 FAM229BQ4G0N7 80 aa7.69□□□□□ -1.18
SHMT2-205ENST00000553474 SSBP3-AS1Q7Z2R9 100 aa7.69□□□□□ -1.18
SHMT2-205ENST00000553474 FAT2Q9NYQ8 4349 aa7.68□□□□□ -1.18
SHMT2-205ENST00000553474 KRTAP10-2P60368 255 aa7.68□□□□□ -1.18
SHMT2-205ENST00000553474 Q1T7F1 81 aa7.66□□□□□ -1.18
SHMT2-205ENST00000553474 KTN1-AS1Q86SY8 53 aa7.65□□□□□ -1.18
SHMT2-205ENST00000553474 A0A1B0GVY2 172 aa7.64□□□□□ -1.19
SHMT2-205ENST00000553474 MRPL34Q9BQ48 92 aaKnown RBP7.64□□□□□ -1.19
SHMT2-205ENST00000553474 IGHV6-1A0A0B4J1U7 121 aa7.64□□□□□ -1.19
SHMT2-205ENST00000553474 CIRBP-AS1Q8TBR5 109 aa7.63□□□□□ -1.19
SHMT2-205ENST00000553474 ANAPC11Q9NYG5 84 aa7.63□□□□□ -1.19
SHMT2-205ENST00000553474 PKD1P98161 4303 aa7.63□□□□□ -1.19
SHMT2-205ENST00000553474 Q6ZSA8 131 aa7.62□□□□□ -1.19
SHMT2-205ENST00000553474 MPLKIPQ8TAP9 179 aa7.61□□□□□ -1.19
SHMT2-205ENST00000553474 IGLV7-46A0A075B6I9 117 aa7.61□□□□□ -1.19
SHMT2-205ENST00000553474 DNAH11Q96DT5 4516 aa7.6□□□□□ -1.19
SHMT2-205ENST00000553474 NDUFS5O43920 106 aa7.6□□□□□ -1.19
SHMT2-205ENST00000553474 C8orf87E5RJ46 101 aa7.59□□□□□ -1.19
SHMT2-205ENST00000553474 DNAH5Q8TE73 4624 aa7.58□□□□□ -1.2
SHMT2-205ENST00000553474 PRR4Q16378 134 aa7.58□□□□□ -1.2
SHMT2-205ENST00000553474 PRR26Q8N8Z3 221 aa7.58□□□□□ -1.2
SHMT2-205ENST00000553474 PKHD1P08F94 4074 aa7.57□□□□□ -1.2
SHMT2-205ENST00000553474 KRTAP10-1P60331 282 aa7.56□□□□□ -1.2
SHMT2-205ENST00000553474 LOC101927531A0A1B0GV80 90 aa7.54□□□□□ -1.2
SHMT2-205ENST00000553474 SPINK6Q6UWN8 80 aa7.52□□□□□ -1.21
SHMT2-205ENST00000553474 EPPK1P58107 5090 aaKnown RBP7.51□□□□□ -1.21
SHMT2-205ENST00000553474 A0A087X002 238 aa7.51□□□□□ -1.21
SHMT2-205ENST00000553474 NOTCH2NLQ7Z3S9 236 aa7.51□□□□□ -1.21
SHMT2-205ENST00000553474 LIMD2Q9BT23 127 aa7.51□□□□□ -1.21
SHMT2-205ENST00000553474 PCOTHQ58A44 107 aa7.48□□□□□ -1.21
SHMT2-205ENST00000553474 DYNC1H1Q14204 4646 aaKnown RBP7.48□□□□□ -1.21
SHMT2-205ENST00000553474 KRTAP13-3Q3SY46 172 aa7.48□□□□□ -1.21
SHMT2-205ENST00000553474 COA5Q86WW8 74 aa7.48□□□□□ -1.21
SHMT2-205ENST00000553474 LINC00313P59037 77 aa7.47□□□□□ -1.21
SHMT2-205ENST00000553474 KRTAP13-2Q52LG2 175 aa7.47□□□□□ -1.21
SHMT2-205ENST00000553474 LRP1BQ9NZR2 4599 aa7.46□□□□□ -1.22
SHMT2-205ENST00000553474 Q8N9P0 234 aaPredicted RBP7.46□□□□□ -1.22
SHMT2-205ENST00000553474 FAM229AH3BQW9 127 aa7.45□□□□□ -1.22
SHMT2-205ENST00000553474 KRTAP1-4P0C5Y4 121 aa7.44□□□□□ -1.22
SHMT2-205ENST00000553474 LCA10Q71F78 164 aa7.44□□□□□ -1.22
SHMT2-205ENST00000553474 PSPHP1O15172 72 aa7.41□□□□□ -1.22
SHMT2-205ENST00000553474 Q5W150 140 aa7.41□□□□□ -1.22
SHMT2-205ENST00000553474 SPINK1P00995 79 aa7.41□□□□□ -1.22
SHMT2-205ENST00000553474 VPS13BQ7Z7G8 4022 aa7.4□□□□□ -1.23
SHMT2-205ENST00000553474 A8MUN3 132 aa7.39□□□□□ -1.23
SHMT2-205ENST00000553474 SMR3BP02814 79 aaPredicted RBP7.39□□□□□ -1.23
SHMT2-205ENST00000553474 RPS29P62273 56 aaKnown RBP7.39□□□□□ -1.23
SHMT2-205ENST00000553474 APOBP04114 4563 aaKnown RBP7.38□□□□□ -1.23
SHMT2-205ENST00000553474 PLA2G1BP04054 148 aaKnown RBP7.38□□□□□ -1.23
SHMT2-205ENST00000553474 Q5VV11 94 aa7.38□□□□□ -1.23
SHMT2-205ENST00000553474 C7orf65Q6ZTY9 151 aa7.38□□□□□ -1.23
SHMT2-205ENST00000553474 HRES1P13985 223 aa7.36□□□□□ -1.23
SHMT2-205ENST00000553474 TYMSOSQ8TAI1 123 aa7.36□□□□□ -1.23
SHMT2-205ENST00000553474 KRTAP16-1A8MUX0 517 aa7.36□□□□□ -1.23
SHMT2-205ENST00000553474 ACYP2P14621 99 aa7.36□□□□□ -1.23
SHMT2-205ENST00000553474 ATP11AUNQ6ZP68 121 aa7.36□□□□□ -1.23
SHMT2-205ENST00000553474 LINC01558Q9Y6Z2 57 aa7.36□□□□□ -1.23
SHMT2-205ENST00000553474 Q75L30 129 aa7.35□□□□□ -1.23
SHMT2-205ENST00000553474 SPAG11AQ6PDA7 123 aa7.34□□□□□ -1.23
SHMT2-205ENST00000553474 KIAA1109Q2LD37 5005 aa7.34□□□□□ -1.23
SHMT2-205ENST00000553474 BIRC6Q9NR09 4857 aa7.34□□□□□ -1.24
SHMT2-205ENST00000553474 PRR15LQ9BU68 103 aa7.33□□□□□ -1.24
SHMT2-205ENST00000553474 A6NN06 94 aa7.33□□□□□ -1.24
SHMT2-205ENST00000553474 IGKV2-30P06310 120 aa7.33□□□□□ -1.24
SHMT2-205ENST00000553474 DMAC1Q96GE9 116 aa7.32□□□□□ -1.24
SHMT2-205ENST00000553474 CHKB-CPT1BH3BT56 60 aa7.31□□□□□ -1.24
SHMT2-205ENST00000553474 RYR1P21817 5038 aa7.3□□□□□ -1.24
SHMT2-205ENST00000553474 HSPG2P98160 4391 aa7.29□□□□□ -1.24
SHMT2-205ENST00000553474 Q5VSD8 79 aa7.28□□□□□ -1.24
SHMT2-205ENST00000553474 LINC00304Q8N9R0 145 aa7.28□□□□□ -1.24
SHMT2-205ENST00000553474 Q8N1X5 172 aa7.25□□□□□ -1.25
SHMT2-205ENST00000553474 KRTAP17-1Q9BYP8 105 aa7.25□□□□□ -1.25
SHMT2-205ENST00000553474 FAT1Q14517 4588 aa7.24□□□□□ -1.25
SHMT2-205ENST00000553474 A6NED7 52 aa7.22□□□□□ -1.25
SHMT2-205ENST00000553474 LINC01554Q52M75 96 aa7.2□□□□□ -1.26
SHMT2-205ENST00000553474 KRTAP10-4P60372 401 aaPredicted RBP7.2□□□□□ -1.26
SHMT2-205ENST00000553474 CDC42SE1Q9NRR8 79 aa7.2□□□□□ -1.26
SHMT2-205ENST00000553474 RETNLBQ9BQ08 111 aa7.18□□□□□ -1.26
SHMT2-205ENST00000553474 SPTSSBQ8NFR3 76 aa7.18□□□□□ -1.26
SHMT2-205ENST00000553474 KRTAP4-5Q9BYR2 181 aa7.18□□□□□ -1.26
SHMT2-205ENST00000553474 HERC2O95714 4834 aa7.16□□□□□ -1.26
SHMT2-205ENST00000553474 IGKV2D-30A0A075B6S6 120 aa7.16□□□□□ -1.26
SHMT2-205ENST00000553474 PKHD1L1Q86WI1 4243 aa7.14□□□□□ -1.27
SHMT2-205ENST00000553474 A0A0A0MQY5 61 aa7.14□□□□□ -1.27
SHMT2-205ENST00000553474 FLG2Q5D862 2391 aaPredicted RBP7.13□□□□□ -1.27
SHMT2-205ENST00000553474 A8MU10 97 aa7.13□□□□□ -1.27
SHMT2-205ENST00000553474 C20orf166-AS1Q96NR2 134 aa7.11□□□□□ -1.27
SHMT2-205ENST00000553474 A8MUU9 505 aa7.1□□□□□ -1.27
SHMT2-205ENST00000553474 A0A1B0GU69 56 aa7.08□□□□□ -1.28
SHMT2-205ENST00000553474 SPINK7P58062 85 aa7.08□□□□□ -1.28
SHMT2-205ENST00000553474 ABCA13Q86UQ4 5058 aa7.06□□□□□ -1.28
SHMT2-205ENST00000553474 MYCBP2O75592 4640 aa7□□□□□ -1.29
SHMT2-205ENST00000553474 LRP1Q07954 4544 aaKnown RBP6.98□□□□□ -1.29
SHMT2-205ENST00000553474 C9orf92A6NGG3 77 aa6.98□□□□□ -1.29
SHMT2-205ENST00000553474 UQCR11O14957 56 aa6.98□□□□□ -1.29
SHMT2-205ENST00000553474 SPATA8Q6RVD6 105 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 149.6 ms