RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 SSPOA2VEC9 5147 aa6.24□□□□□ -1.41
SUPT16H-202ENST00000552829 J3QR89 54 aa6.23□□□□□ -1.41
SUPT16H-202ENST00000552829 RBM3P98179 157 aaKnown RBP6.23□□□□□ -1.41
SUPT16H-202ENST00000552829 SMIM29Q86T20 159 aa6.23□□□□□ -1.41
SUPT16H-202ENST00000552829 SPRR4Q96PI1 79 aa6.23□□□□□ -1.41
SUPT16H-202ENST00000552829 F8WEM9 126 aa6.22□□□□□ -1.41
SUPT16H-202ENST00000552829 VPS25Q9BRG1 176 aa6.21□□□□□ -1.42
SUPT16H-202ENST00000552829 ZNF706Q9Y5V0 76 aaPredicted RBP6.21□□□□□ -1.42
SUPT16H-202ENST00000552829 USH2AO75445 5202 aa6.21□□□□□ -1.42
SUPT16H-202ENST00000552829 FCGBPQ9Y6R7 5405 aaPredicted RBP6.2□□□□□ -1.42
SUPT16H-202ENST00000552829 SPRR1BP22528 89 aa6.2□□□□□ -1.42
SUPT16H-202ENST00000552829 DSCR8Q96T75 97 aa6.2□□□□□ -1.42
SUPT16H-202ENST00000552829 IGLV8-61A0A075B6I0 122 aa6.19□□□□□ -1.42
SUPT16H-202ENST00000552829 A0A0G2JQZ4 141 aa6.19□□□□□ -1.42
SUPT16H-202ENST00000552829 RPS29P62273 56 aaKnown RBP6.19□□□□□ -1.42
SUPT16H-202ENST00000552829 PCOTHQ58A44 107 aa6.19□□□□□ -1.42
SUPT16H-202ENST00000552829 Q6ZQT0 140 aa6.19□□□□□ -1.42
SUPT16H-202ENST00000552829 LOC110117498A0A087WWA1 95 aa6.18□□□□□ -1.42
SUPT16H-202ENST00000552829 IGLV9-49A0A0B4J1Y8 123 aa6.18□□□□□ -1.42
SUPT16H-202ENST00000552829 TRBV7-4A0A0J9YYF1 115 aa6.18□□□□□ -1.42
SUPT16H-202ENST00000552829 M0R2T5 61 aa6.18□□□□□ -1.42
SUPT16H-202ENST00000552829 CCKP06307 115 aa6.18□□□□□ -1.42
SUPT16H-202ENST00000552829 C9orf153Q5TBE3 101 aa6.18□□□□□ -1.42
SUPT16H-202ENST00000552829 MPLKIPQ8TAP9 179 aa6.18□□□□□ -1.42
SUPT16H-202ENST00000552829 LINC00483Q53H64 154 aa6.17□□□□□ -1.42
SUPT16H-202ENST00000552829 MOBPQ13875 183 aa6.15□□□□□ -1.42
SUPT16H-202ENST00000552829 IGFL1Q6UW32 110 aa6.15□□□□□ -1.42
SUPT16H-202ENST00000552829 Q75L30 129 aa6.14□□□□□ -1.43
SUPT16H-202ENST00000552829 FAM240AA0A1B0GVK7 77 aa6.13□□□□□ -1.43
SUPT16H-202ENST00000552829 A0A1W2PNM2 257 aa6.13□□□□□ -1.43
SUPT16H-202ENST00000552829 PDE6GP18545 87 aa6.13□□□□□ -1.43
SUPT16H-202ENST00000552829 ACYP1P07311 99 aa6.12□□□□□ -1.43
SUPT16H-202ENST00000552829 LINC00846Q9NV44 126 aa6.12□□□□□ -1.43
SUPT16H-202ENST00000552829 Q6JHZ5 121 aa6.1□□□□□ -1.43
SUPT16H-202ENST00000552829 HRCT1Q6UXD1 115 aa6.1□□□□□ -1.43
SUPT16H-202ENST00000552829 SSBP3-AS1Q7Z2R9 100 aa6.1□□□□□ -1.43
SUPT16H-202ENST00000552829 MT-ATP8P03928 68 aa6.06□□□□□ -1.44
SUPT16H-202ENST00000552829 COX6B2Q6YFQ2 88 aa6.06□□□□□ -1.44
SUPT16H-202ENST00000552829 Q6ZVQ6 151 aa6.06□□□□□ -1.44
SUPT16H-202ENST00000552829 UBL5Q9BZL1 73 aa6.06□□□□□ -1.44
SUPT16H-202ENST00000552829 A0A087WSZ3 146 aa6.05□□□□□ -1.44
SUPT16H-202ENST00000552829 IGKV3D-7A0A0C4DH55 119 aa6.05□□□□□ -1.44
SUPT16H-202ENST00000552829 KRTAP9-8Q9BYQ0 159 aa6.04□□□□□ -1.44
SUPT16H-202ENST00000552829 TRBV7-7A0A0K0K1E9 115 aa6.03□□□□□ -1.44
SUPT16H-202ENST00000552829 NREPQ16612 68 aa6.03□□□□□ -1.44
SUPT16H-202ENST00000552829 LINC00643Q86TS7 51 aa6.03□□□□□ -1.44
SUPT16H-202ENST00000552829 C9orf92A6NGG3 77 aa6.02□□□□□ -1.45
SUPT16H-202ENST00000552829 Q6Q795 121 aa6.02□□□□□ -1.45
SUPT16H-202ENST00000552829 MACF1Q9UPN3 7388 aaKnown RBP6.01□□□□□ -1.45
SUPT16H-202ENST00000552829 SIGMAR1Q99720 223 aa6.01□□□□□ -1.45
SUPT16H-202ENST00000552829 A0A1B0GW54 56 aa5.99□□□□□ -1.45
SUPT16H-202ENST00000552829 DEFB116Q30KQ4 102 aa5.99□□□□□ -1.45
SUPT16H-202ENST00000552829 BPY2O14599 106 aa5.97□□□□□ -1.45
SUPT16H-202ENST00000552829 ATP5EP2Q5VTU8 51 aa5.97□□□□□ -1.45
SUPT16H-202ENST00000552829 RPL37P61927 97 aaKnown RBP5.96□□□□□ -1.46
SUPT16H-202ENST00000552829 CD164Q04900 197 aa5.96□□□□□ -1.46
SUPT16H-202ENST00000552829 LCE5AQ5TCM9 118 aa5.96□□□□□ -1.46
SUPT16H-202ENST00000552829 SS18L2Q9UHA2 77 aa5.96□□□□□ -1.46
SUPT16H-202ENST00000552829 HIST1H4AP62805 103 aaKnown RBP5.95□□□□□ -1.46
SUPT16H-202ENST00000552829 Q8N9L7 120 aa5.95□□□□□ -1.46
SUPT16H-202ENST00000552829 A0A087WVE0 104 aa5.94□□□□□ -1.46
SUPT16H-202ENST00000552829 CXCL6P80162 114 aa5.94□□□□□ -1.46
SUPT16H-202ENST00000552829 KRTAP5-3Q6L8H2 238 aa5.93□□□□□ -1.46
SUPT16H-202ENST00000552829 Q96NJ1 140 aa5.93□□□□□ -1.46
SUPT16H-202ENST00000552829 SYNE2Q8WXH0 6885 aaKnown RBP5.92□□□□□ -1.46
SUPT16H-202ENST00000552829 IGKV4-1P06312 121 aa5.92□□□□□ -1.46
SUPT16H-202ENST00000552829 DSCR10P59022 87 aa5.92□□□□□ -1.46
SUPT16H-202ENST00000552829 LIMD2Q9BT23 127 aa5.92□□□□□ -1.46
SUPT16H-202ENST00000552829 LINC00472Q9H8W2 130 aa5.92□□□□□ -1.46
SUPT16H-202ENST00000552829 K7EQZ3 153 aa5.9□□□□□ -1.46
SUPT16H-202ENST00000552829 IMUPQ9GZP8 106 aa5.89□□□□□ -1.47
SUPT16H-202ENST00000552829 FAM236AA0A1B0GUQ0 79 aa5.88□□□□□ -1.47
SUPT16H-202ENST00000552829 FAM236BA0A1B0GV22 79 aa5.88□□□□□ -1.47
SUPT16H-202ENST00000552829 MT2AP02795 61 aa5.88□□□□□ -1.47
SUPT16H-202ENST00000552829 KRTAP9-3Q9BYQ3 159 aa5.88□□□□□ -1.47
SUPT16H-202ENST00000552829 J3KT08 172 aa5.87□□□□□ -1.47
SUPT16H-202ENST00000552829 KRTAP6-3Q3LI67 103 aa5.87□□□□□ -1.47
SUPT16H-202ENST00000552829 A8MWP4 228 aa5.86□□□□□ -1.47
SUPT16H-202ENST00000552829 C1orf195Q5TG92 126 aa5.86□□□□□ -1.47
SUPT16H-202ENST00000552829 KRTAP15-1Q3LI76 137 aa5.85□□□□□ -1.47
SUPT16H-202ENST00000552829 Q5XG85 94 aa5.85□□□□□ -1.47
SUPT16H-202ENST00000552829 IGHV6-1A0A0B4J1U7 121 aa5.84□□□□□ -1.47
SUPT16H-202ENST00000552829 SCGB1A1P11684 91 aa5.84□□□□□ -1.47
SUPT16H-202ENST00000552829 A0A1B0GVX0 72 aa5.83□□□□□ -1.48
SUPT16H-202ENST00000552829 NDUFB1O75438 58 aa5.83□□□□□ -1.48
SUPT16H-202ENST00000552829 MT1FP04733 61 aa5.83□□□□□ -1.48
SUPT16H-202ENST00000552829 KRTAP19-6Q3LI70 58 aa5.83□□□□□ -1.48
SUPT16H-202ENST00000552829 WFDC13Q8IUB5 93 aa5.83□□□□□ -1.48
SUPT16H-202ENST00000552829 PRR15Q8IV56 129 aa5.83□□□□□ -1.48
SUPT16H-202ENST00000552829 MMP24-AS1A0A0U1RRL7 71 aa5.81□□□□□ -1.48
SUPT16H-202ENST00000552829 HCG22E2RYF7 251 aa5.81□□□□□ -1.48
SUPT16H-202ENST00000552829 C8orf17Q9NRJ1 99 aa5.8□□□□□ -1.48
SUPT16H-202ENST00000552829 CASC2Q6XLA1 102 aa5.78□□□□□ -1.48
SUPT16H-202ENST00000552829 NOTCH2NLQ7Z3S9 236 aa5.78□□□□□ -1.48
SUPT16H-202ENST00000552829 ATOX1O00244 68 aa5.77□□□□□ -1.49
SUPT16H-202ENST00000552829 ANAPC13Q9BS18 74 aa5.76□□□□□ -1.49
SUPT16H-202ENST00000552829 hDV103S1A0JD37 113 aa5.75□□□□□ -1.49
SUPT16H-202ENST00000552829 C8orf87E5RJ46 101 aa5.75□□□□□ -1.49
SUPT16H-202ENST00000552829 KRTAP10-10P60014 251 aa5.74□□□□□ -1.49
SUPT16H-202ENST00000552829 LINC00313P59037 77 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms