RNA–Protein interactions for RNA: ENST00000552620.1

CHMP4A-210, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 716 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-210ENST00000552620 FBN1P35555 2871 aaKnown RBP3.64□□□□□ -1.83
CHMP4A-210ENST00000552620 MT3P25713 68 aa3.63□□□□□ -1.83
CHMP4A-210ENST00000552620 LINC00483Q53H64 154 aa3.63□□□□□ -1.83
CHMP4A-210ENST00000552620 Q6ZRN7 208 aaPredicted RBP3.63□□□□□ -1.83
CHMP4A-210ENST00000552620 SPACA4Q8TDM5 124 aa3.63□□□□□ -1.83
CHMP4A-210ENST00000552620 LINC00208Q96KT6 92 aa3.63□□□□□ -1.83
CHMP4A-210ENST00000552620 DNAH9Q9NYC9 4486 aa3.63□□□□□ -1.83
CHMP4A-210ENST00000552620 ASB16-AS1Q495Z4 193 aa3.62□□□□□ -1.83
CHMP4A-210ENST00000552620 MMP24-AS1A0A0U1RRL7 71 aa3.61□□□□□ -1.83
CHMP4A-210ENST00000552620 MOBPQ13875 183 aa3.61□□□□□ -1.83
CHMP4A-210ENST00000552620 BRK1Q8WUW1 75 aa3.61□□□□□ -1.83
CHMP4A-210ENST00000552620 DNAH10Q8IVF4 4471 aa3.61□□□□□ -1.83
CHMP4A-210ENST00000552620 FLNBO75369 2602 aaKnown RBP3.6□□□□□ -1.83
CHMP4A-210ENST00000552620 A0A087WTM6 91 aa3.59□□□□□ -1.83
CHMP4A-210ENST00000552620 PANO1I0J062 215 aa3.59□□□□□ -1.83
CHMP4A-210ENST00000552620 Q96NJ1 140 aa3.59□□□□□ -1.83
CHMP4A-210ENST00000552620 LIMD2Q9BT23 127 aa3.59□□□□□ -1.83
CHMP4A-210ENST00000552620 C8orf17Q9NRJ1 99 aa3.59□□□□□ -1.83
CHMP4A-210ENST00000552620 MAST4O15021 2626 aa3.59□□□□□ -1.83
CHMP4A-210ENST00000552620 VPS13DQ5THJ4 4388 aa3.59□□□□□ -1.84
CHMP4A-210ENST00000552620 A0A1B0GVX0 72 aa3.58□□□□□ -1.84
CHMP4A-210ENST00000552620 PRR4Q16378 134 aa3.58□□□□□ -1.84
CHMP4A-210ENST00000552620 Q6ZR54 194 aa3.58□□□□□ -1.84
CHMP4A-210ENST00000552620 PLAC8Q9NZF1 115 aa3.58□□□□□ -1.84
CHMP4A-210ENST00000552620 PLECQ15149 4684 aaKnown RBP3.58□□□□□ -1.84
CHMP4A-210ENST00000552620 STAB1Q9NY15 2570 aa3.57□□□□□ -1.84
CHMP4A-210ENST00000552620 ZNF861PO60384 105 aa3.57□□□□□ -1.84
CHMP4A-210ENST00000552620 DNAH17Q9UFH2 4485 aa3.56□□□□□ -1.84
CHMP4A-210ENST00000552620 RTL8CO15255 209 aa3.56□□□□□ -1.84
CHMP4A-210ENST00000552620 MRPL34Q9BQ48 92 aaKnown RBP3.56□□□□□ -1.84
CHMP4A-210ENST00000552620 PSORS1C2Q9UIG4 136 aa3.56□□□□□ -1.84
CHMP4A-210ENST00000552620 PMAIP1Q13794 54 aa3.55□□□□□ -1.84
CHMP4A-210ENST00000552620 IGHV6-1A0A0B4J1U7 121 aa3.54□□□□□ -1.84
CHMP4A-210ENST00000552620 PSPHP1O15172 72 aa3.54□□□□□ -1.84
CHMP4A-210ENST00000552620 SSBP3-AS1Q7Z2R9 100 aa3.54□□□□□ -1.84
CHMP4A-210ENST00000552620 BAHCC1Q9P281 2608 aa3.53□□□□□ -1.84
CHMP4A-210ENST00000552620 NOTCH1P46531 2555 aa3.53□□□□□ -1.84
CHMP4A-210ENST00000552620 A8MUN3 132 aa3.53□□□□□ -1.84
CHMP4A-210ENST00000552620 C8orf87E5RJ46 101 aa3.53□□□□□ -1.84
CHMP4A-210ENST00000552620 Q5VV11 94 aa3.53□□□□□ -1.84
CHMP4A-210ENST00000552620 COA5Q86WW8 74 aa3.53□□□□□ -1.84
CHMP4A-210ENST00000552620 LOC101927531A0A1B0GV80 90 aa3.52□□□□□ -1.85
CHMP4A-210ENST00000552620 NDUFS5O43920 106 aa3.52□□□□□ -1.85
CHMP4A-210ENST00000552620 IGLV7-43P04211 117 aa3.52□□□□□ -1.85
CHMP4A-210ENST00000552620 PCOTHQ58A44 107 aa3.52□□□□□ -1.85
CHMP4A-210ENST00000552620 C1orf134Q5TEV5 83 aa3.51□□□□□ -1.85
CHMP4A-210ENST00000552620 LINC01558Q9Y6Z2 57 aa3.51□□□□□ -1.85
CHMP4A-210ENST00000552620 COL6A5A8TX70 2615 aa3.5□□□□□ -1.85
CHMP4A-210ENST00000552620 DNAH8Q96JB1 4490 aa3.5□□□□□ -1.85
CHMP4A-210ENST00000552620 DNAH2Q9P225 4427 aa3.5□□□□□ -1.85
CHMP4A-210ENST00000552620 CHKB-CPT1BH3BT56 60 aa3.5□□□□□ -1.85
CHMP4A-210ENST00000552620 NBEAL1Q6ZS30 2694 aa3.49□□□□□ -1.85
CHMP4A-210ENST00000552620 PRR15LQ9BU68 103 aa3.49□□□□□ -1.85
CHMP4A-210ENST00000552620 ANAPC11Q9NYG5 84 aa3.49□□□□□ -1.85
CHMP4A-210ENST00000552620 KRTAP16-1A8MUX0 517 aa3.48□□□□□ -1.85
CHMP4A-210ENST00000552620 CIRBP-AS1Q8TBR5 109 aa3.48□□□□□ -1.85
CHMP4A-210ENST00000552620 DNAH6Q9C0G6 4158 aa3.47□□□□□ -1.85
CHMP4A-210ENST00000552620 HRES1P13985 223 aa3.47□□□□□ -1.85
CHMP4A-210ENST00000552620 ACYP2P14621 99 aa3.47□□□□□ -1.85
CHMP4A-210ENST00000552620 KRTAP13-3Q3SY46 172 aa3.47□□□□□ -1.85
CHMP4A-210ENST00000552620 STARD9Q9P2P6 4700 aa3.46□□□□□ -1.86
CHMP4A-210ENST00000552620 COL7A1Q02388 2944 aa3.46□□□□□ -1.86
CHMP4A-210ENST00000552620 LINC00313P59037 77 aa3.46□□□□□ -1.86
CHMP4A-210ENST00000552620 SPINK6Q6UWN8 80 aa3.46□□□□□ -1.86
CHMP4A-210ENST00000552620 ATP11AUNQ6ZP68 121 aa3.46□□□□□ -1.86
CHMP4A-210ENST00000552620 MGAM2Q2M2H8 2515 aa3.46□□□□□ -1.86
CHMP4A-210ENST00000552620 DNAH7Q8WXX0 4024 aa3.46□□□□□ -1.86
CHMP4A-210ENST00000552620 STAB2Q8WWQ8 2551 aa3.45□□□□□ -1.86
CHMP4A-210ENST00000552620 SRRM2Q9UQ35 2752 aaKnown RBP3.45□□□□□ -1.86
CHMP4A-210ENST00000552620 A6NED7 52 aa3.45□□□□□ -1.86
CHMP4A-210ENST00000552620 Q5W150 140 aa3.45□□□□□ -1.86
CHMP4A-210ENST00000552620 CDC42SE1Q9NRR8 79 aa3.45□□□□□ -1.86
CHMP4A-210ENST00000552620 LYSTQ99698 3801 aa3.45□□□□□ -1.86
CHMP4A-210ENST00000552620 PRKDCP78527 4128 aaKnown RBP3.45□□□□□ -1.86
CHMP4A-210ENST00000552620 HECTD4Q9Y4D8 3996 aa3.44□□□□□ -1.86
CHMP4A-210ENST00000552620 SPAG11AQ6PDA7 123 aa3.44□□□□□ -1.86
CHMP4A-210ENST00000552620 RBM12B-AS1Q9P1G2 102 aa3.44□□□□□ -1.86
CHMP4A-210ENST00000552620 TENM2Q9NT68 2774 aa3.44□□□□□ -1.86
CHMP4A-210ENST00000552620 LY6G6CO95867 125 aa3.43□□□□□ -1.86
CHMP4A-210ENST00000552620 LCA10Q71F78 164 aa3.43□□□□□ -1.86
CHMP4A-210ENST00000552620 DNAH11Q96DT5 4516 aa3.42□□□□□ -1.86
CHMP4A-210ENST00000552620 Q6ZSA8 131 aa3.42□□□□□ -1.86
CHMP4A-210ENST00000552620 DMAC1Q96GE9 116 aa3.42□□□□□ -1.86
CHMP4A-210ENST00000552620 ALMS1Q8TCU4 4167 aa3.41□□□□□ -1.86
CHMP4A-210ENST00000552620 KRTAP13-2Q52LG2 175 aa3.4□□□□□ -1.87
CHMP4A-210ENST00000552620 CSMD3Q7Z407 3707 aa3.39□□□□□ -1.87
CHMP4A-210ENST00000552620 SPTSSBQ8NFR3 76 aa3.39□□□□□ -1.87
CHMP4A-210ENST00000552620 KRTAP2-2Q9BYT5 123 aa3.39□□□□□ -1.87
CHMP4A-210ENST00000552620 DNAH5Q8TE73 4624 aa3.39□□□□□ -1.87
CHMP4A-210ENST00000552620 A8MU10 97 aa3.38□□□□□ -1.87
CHMP4A-210ENST00000552620 SPINK1P00995 79 aa3.38□□□□□ -1.87
CHMP4A-210ENST00000552620 KRTAP10-1P60331 282 aa3.38□□□□□ -1.87
CHMP4A-210ENST00000552620 KTN1-AS1Q86SY8 53 aa3.38□□□□□ -1.87
CHMP4A-210ENST00000552620 A6NN06 94 aa3.37□□□□□ -1.87
CHMP4A-210ENST00000552620 KRTAP1-4P0C5Y4 121 aa3.37□□□□□ -1.87
CHMP4A-210ENST00000552620 SPINK7P58062 85 aa3.37□□□□□ -1.87
CHMP4A-210ENST00000552620 FRAS1Q86XX4 4008 aa3.36□□□□□ -1.87
CHMP4A-210ENST00000552620 RPS29P62273 56 aaKnown RBP3.36□□□□□ -1.87
CHMP4A-210ENST00000552620 KMT2AQ03164 3969 aa3.35□□□□□ -1.87
CHMP4A-210ENST00000552620 A0A1B0GU69 56 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 1125 ms