RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-209ENST00000552516 V9GYY9 64 aa6.4□□□□□ -1.38
TGFBR1-209ENST00000552516 ACYP2P14621 99 aa6.4□□□□□ -1.38
TGFBR1-209ENST00000552516 J3QL48 77 aa6.39□□□□□ -1.39
TGFBR1-209ENST00000552516 RPS28P62857 69 aaKnown RBP6.38□□□□□ -1.39
TGFBR1-209ENST00000552516 ATP11AUNQ6ZP68 121 aa6.38□□□□□ -1.39
TGFBR1-209ENST00000552516 LOC101927531A0A1B0GV80 90 aa6.35□□□□□ -1.39
TGFBR1-209ENST00000552516 CD164Q04900 197 aa6.35□□□□□ -1.39
TGFBR1-209ENST00000552516 HRES1P13985 223 aa6.32□□□□□ -1.4
TGFBR1-209ENST00000552516 FP248Q71RG6 208 aaPredicted RBP6.32□□□□□ -1.4
TGFBR1-209ENST00000552516 C8orf87E5RJ46 101 aa6.32□□□□□ -1.4
TGFBR1-209ENST00000552516 A0A0D9SG42 100 aa6.3□□□□□ -1.4
TGFBR1-209ENST00000552516 Q5W150 140 aa6.3□□□□□ -1.4
TGFBR1-209ENST00000552516 PRO0628Q9UI54 55 aa6.29□□□□□ -1.4
TGFBR1-209ENST00000552516 SPRR1BP22528 89 aa6.29□□□□□ -1.4
TGFBR1-209ENST00000552516 LCE6AA0A183 80 aa6.29□□□□□ -1.4
TGFBR1-209ENST00000552516 Q5VSD8 79 aa6.29□□□□□ -1.4
TGFBR1-209ENST00000552516 H3BPC8 53 aa6.28□□□□□ -1.4
TGFBR1-209ENST00000552516 LINC01554Q52M75 96 aa6.28□□□□□ -1.4
TGFBR1-209ENST00000552516 KRTAP13-2Q52LG2 175 aa6.26□□□□□ -1.41
TGFBR1-209ENST00000552516 Q5XG85 94 aa6.26□□□□□ -1.41
TGFBR1-209ENST00000552516 IGLV7-46A0A075B6I9 117 aa6.25□□□□□ -1.41
TGFBR1-209ENST00000552516 CYP4F30PQ9H0H9 118 aa6.23□□□□□ -1.41
TGFBR1-209ENST00000552516 COX6B2Q6YFQ2 88 aa6.21□□□□□ -1.42
TGFBR1-209ENST00000552516 KRTAP29-1A8MX34 341 aaPredicted RBP6.2□□□□□ -1.42
TGFBR1-209ENST00000552516 DNHD1Q96M86 4753 aa6.2□□□□□ -1.42
TGFBR1-209ENST00000552516 KRTAP13-1Q8IUC0 172 aa6.2□□□□□ -1.42
TGFBR1-209ENST00000552516 A8MU10 97 aa6.19□□□□□ -1.42
TGFBR1-209ENST00000552516 LINC00483Q53H64 154 aa6.19□□□□□ -1.42
TGFBR1-209ENST00000552516 HUWE1Q7Z6Z7 4374 aaKnown RBP6.18□□□□□ -1.42
TGFBR1-209ENST00000552516 SPINK7P58062 85 aa6.17□□□□□ -1.42
TGFBR1-209ENST00000552516 CRIPTQ9P021 101 aa6.16□□□□□ -1.42
TGFBR1-209ENST00000552516 DNAH10Q8IVF4 4471 aa6.15□□□□□ -1.43
TGFBR1-209ENST00000552516 ANK2Q01484 3957 aa6.15□□□□□ -1.43
TGFBR1-209ENST00000552516 MIR22HGQ0VDD5 57 aa6.14□□□□□ -1.43
TGFBR1-209ENST00000552516 ZCCHC13Q8WW36 166 aaKnown RBP6.14□□□□□ -1.43
TGFBR1-209ENST00000552516 SPANXA2-OT1Q8N9U9 137 aa6.12□□□□□ -1.43
TGFBR1-209ENST00000552516 UQCR11O14957 56 aa6.12□□□□□ -1.43
TGFBR1-209ENST00000552516 SPINT4Q6UDR6 99 aa6.11□□□□□ -1.43
TGFBR1-209ENST00000552516 Q6ZSA8 131 aa6.1□□□□□ -1.43
TGFBR1-209ENST00000552516 LYSTQ99698 3801 aa6.09□□□□□ -1.44
TGFBR1-209ENST00000552516 Q5VV11 94 aa6.09□□□□□ -1.44
TGFBR1-209ENST00000552516 PRAC1Q96KF2 57 aa6.07□□□□□ -1.44
TGFBR1-209ENST00000552516 Q1T7F1 81 aa6.04□□□□□ -1.44
TGFBR1-209ENST00000552516 SPATA8Q6RVD6 105 aa6.03□□□□□ -1.44
TGFBR1-209ENST00000552516 KRTAP1-4P0C5Y4 121 aa6.02□□□□□ -1.45
TGFBR1-209ENST00000552516 PLECQ15149 4684 aaKnown RBP6.02□□□□□ -1.45
TGFBR1-209ENST00000552516 RBM12B-AS1Q9P1G2 102 aa5.98□□□□□ -1.45
TGFBR1-209ENST00000552516 PRKDCP78527 4128 aaKnown RBP5.97□□□□□ -1.45
TGFBR1-209ENST00000552516 A0A1B0GU33 70 aa5.97□□□□□ -1.45
TGFBR1-209ENST00000552516 DNAH9Q9NYC9 4486 aa5.97□□□□□ -1.45
TGFBR1-209ENST00000552516 CDC42SE1Q9NRR8 79 aa5.95□□□□□ -1.46
TGFBR1-209ENST00000552516 M0R2T5 61 aa5.94□□□□□ -1.46
TGFBR1-209ENST00000552516 LINC01558Q9Y6Z2 57 aa5.94□□□□□ -1.46
TGFBR1-209ENST00000552516 LCA10Q71F78 164 aa5.93□□□□□ -1.46
TGFBR1-209ENST00000552516 DMAC1Q96GE9 116 aa5.92□□□□□ -1.46
TGFBR1-209ENST00000552516 Q75L30 129 aa5.92□□□□□ -1.46
TGFBR1-209ENST00000552516 KMT2AQ03164 3969 aa5.9□□□□□ -1.46
TGFBR1-209ENST00000552516 STARD9Q9P2P6 4700 aa5.9□□□□□ -1.46
TGFBR1-209ENST00000552516 DNAH11Q96DT5 4516 aa5.9□□□□□ -1.46
TGFBR1-209ENST00000552516 S4R3F8 94 aa5.9□□□□□ -1.47
TGFBR1-209ENST00000552516 ADM2Q7Z4H4 148 aa5.87□□□□□ -1.47
TGFBR1-209ENST00000552516 KTN1-AS1Q86SY8 53 aa5.85□□□□□ -1.47
TGFBR1-209ENST00000552516 FAT1Q14517 4588 aa5.82□□□□□ -1.48
TGFBR1-209ENST00000552516 CSAG1Q6PB30 78 aa5.81□□□□□ -1.48
TGFBR1-209ENST00000552516 DNAH1Q9P2D7 4330 aa5.81□□□□□ -1.48
TGFBR1-209ENST00000552516 DNAH7Q8WXX0 4024 aa5.79□□□□□ -1.48
TGFBR1-209ENST00000552516 ASB16-AS1Q495Z4 193 aa5.78□□□□□ -1.48
TGFBR1-209ENST00000552516 R4GN34 69 aa5.78□□□□□ -1.48
TGFBR1-209ENST00000552516 DNAH8Q96JB1 4490 aa5.77□□□□□ -1.49
TGFBR1-209ENST00000552516 KRTAP21-3Q3LHN1 58 aa5.77□□□□□ -1.49
TGFBR1-209ENST00000552516 CAMK2N1Q7Z7J9 78 aa5.76□□□□□ -1.49
TGFBR1-209ENST00000552516 M0QZ58 72 aa5.75□□□□□ -1.49
TGFBR1-209ENST00000552516 DNAH5Q8TE73 4624 aa5.75□□□□□ -1.49
TGFBR1-209ENST00000552516 KRTAP16-1A8MUX0 517 aa5.74□□□□□ -1.49
TGFBR1-209ENST00000552516 A0A1B0GVY2 172 aa5.73□□□□□ -1.49
TGFBR1-209ENST00000552516 XP32Q5T750 250 aa5.73□□□□□ -1.49
TGFBR1-209ENST00000552516 H1FX-AS1Q4G0G2 97 aa5.73□□□□□ -1.49
TGFBR1-209ENST00000552516 FRAS1Q86XX4 4008 aa5.72□□□□□ -1.49
TGFBR1-209ENST00000552516 SEC61BP60468 96 aaKnown RBP5.71□□□□□ -1.5
TGFBR1-209ENST00000552516 RPL37P61927 97 aaKnown RBP5.7□□□□□ -1.5
TGFBR1-209ENST00000552516 MYCBP2O75592 4640 aa5.69□□□□□ -1.5
TGFBR1-209ENST00000552516 A8MUU9 505 aa5.69□□□□□ -1.5
TGFBR1-209ENST00000552516 CMYA5Q8N3K9 4069 aa5.67□□□□□ -1.5
TGFBR1-209ENST00000552516 C20orf166-AS1Q96NR2 134 aa5.67□□□□□ -1.5
TGFBR1-209ENST00000552516 LRP1BQ9NZR2 4599 aa5.66□□□□□ -1.5
TGFBR1-209ENST00000552516 DNAH6Q9C0G6 4158 aa5.64□□□□□ -1.51
TGFBR1-209ENST00000552516 VPS13DQ5THJ4 4388 aa5.64□□□□□ -1.51
TGFBR1-209ENST00000552516 KRTAP4-5Q9BYR2 181 aa5.64□□□□□ -1.51
TGFBR1-209ENST00000552516 FAT3Q8TDW7 4589 aa5.62□□□□□ -1.51
TGFBR1-209ENST00000552516 RPS29P62273 56 aaKnown RBP5.62□□□□□ -1.51
TGFBR1-209ENST00000552516 KRTAP13-3Q3SY46 172 aa5.59□□□□□ -1.51
TGFBR1-209ENST00000552516 KRTAP10-8P60410 259 aa5.58□□□□□ -1.52
TGFBR1-209ENST00000552516 VPS13BQ7Z7G8 4022 aa5.58□□□□□ -1.52
TGFBR1-209ENST00000552516 P0C880 135 aa5.58□□□□□ -1.52
TGFBR1-209ENST00000552516 HYDINQ4G0P3 5121 aa5.57□□□□□ -1.52
TGFBR1-209ENST00000552516 A6NN06 94 aa5.57□□□□□ -1.52
TGFBR1-209ENST00000552516 C10orf95Q9H7T3 257 aa5.56□□□□□ -1.52
TGFBR1-209ENST00000552516 DNAH17Q9UFH2 4485 aa5.56□□□□□ -1.52
TGFBR1-209ENST00000552516 KIAA1109Q2LD37 5005 aa5.55□□□□□ -1.52
TGFBR1-209ENST00000552516 RYR1P21817 5038 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms