RNA–Protein interactions for RNA: ENST00000552422.5

CNOT2-238, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 3

Gene CNOT2, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-238	ENST00000552422	COL5A1-AS1	Q5SY13	56 aa		3.68	□□□□□ -1.82
CNOT2-238	ENST00000552422		Q6Q795	121 aa		3.68	□□□□□ -1.82
CNOT2-238	ENST00000552422	MUC17	Q685J3	4493 aa		3.68	□□□□□ -1.82
CNOT2-238	ENST00000552422		H3BMG7	143 aa		3.67	□□□□□ -1.82
CNOT2-238	ENST00000552422	TMEM256-PLSCR3	K7ERE1	68 aa		3.67	□□□□□ -1.82
CNOT2-238	ENST00000552422	TCL1B	O95988	128 aa		3.67	□□□□□ -1.82
CNOT2-238	ENST00000552422	BATF	Q16520	125 aa		3.67	□□□□□ -1.82
CNOT2-238	ENST00000552422	ASB16-AS1	Q495Z4	193 aa		3.67	□□□□□ -1.82
CNOT2-238	ENST00000552422	C1orf195	Q5TG92	126 aa		3.67	□□□□□ -1.82
CNOT2-238	ENST00000552422	NAA38	Q9BRA0	125 aa	Known RBP	3.67	□□□□□ -1.82
CNOT2-238	ENST00000552422	TAX1BP3	O14907	124 aa		3.66	□□□□□ -1.82
CNOT2-238	ENST00000552422	TEN1	Q86WV5	123 aa		3.66	□□□□□ -1.82
CNOT2-238	ENST00000552422	UBE2V1	Q13404	147 aa		3.65	□□□□□ -1.83
CNOT2-238	ENST00000552422	ATXN8	Q156A1	80 aa		3.65	□□□□□ -1.83
CNOT2-238	ENST00000552422	LYRM7	Q5U5X0	104 aa		3.65	□□□□□ -1.83
CNOT2-238	ENST00000552422	NOTCH2NL	Q7Z3S9	236 aa		3.65	□□□□□ -1.83
CNOT2-238	ENST00000552422		A0A1B0GV72	72 aa		3.64	□□□□□ -1.83
CNOT2-238	ENST00000552422	SS18L2	Q9UHA2	77 aa		3.64	□□□□□ -1.83
CNOT2-238	ENST00000552422	TRBV20-1	A0A075B6N2	111 aa		3.63	□□□□□ -1.83
CNOT2-238	ENST00000552422	TRBV7-4	A0A0J9YYF1	115 aa		3.63	□□□□□ -1.83
CNOT2-238	ENST00000552422		A0A1B0GV90	55 aa		3.63	□□□□□ -1.83
CNOT2-238	ENST00000552422		A0A1W2PNM2	257 aa		3.63	□□□□□ -1.83
CNOT2-238	ENST00000552422	BAALC-AS2	P0C853	105 aa		3.63	□□□□□ -1.83
CNOT2-238	ENST00000552422	LCE3C	Q5T5A8	94 aa		3.63	□□□□□ -1.83
CNOT2-238	ENST00000552422	KRTAP5-1	Q6L8H4	278 aa		3.63	□□□□□ -1.83
CNOT2-238	ENST00000552422	ANKRD29	Q8N6D5	301 aa		3.63	□□□□□ -1.83
CNOT2-238	ENST00000552422		A0A087WSZ3	146 aa		3.62	□□□□□ -1.83
CNOT2-238	ENST00000552422	C9orf92	A6NGG3	77 aa		3.62	□□□□□ -1.83
CNOT2-238	ENST00000552422		A0A1W2PPM0	123 aa		3.61	□□□□□ -1.83
CNOT2-238	ENST00000552422	CCK	P06307	115 aa		3.61	□□□□□ -1.83
CNOT2-238	ENST00000552422	RBM3	P98179	157 aa	Known RBP	3.61	□□□□□ -1.83
CNOT2-238	ENST00000552422		Q96NJ1	140 aa		3.61	□□□□□ -1.83
CNOT2-238	ENST00000552422		C9JAW5	83 aa		3.6	□□□□□ -1.83
CNOT2-238	ENST00000552422		Q75L30	129 aa		3.6	□□□□□ -1.83
CNOT2-238	ENST00000552422	DSCR8	Q96T75	97 aa		3.6	□□□□□ -1.83
CNOT2-238	ENST00000552422	FAT4	Q6V0I7	4981 aa		3.59	□□□□□ -1.83
CNOT2-238	ENST00000552422	JMJD7-PLA2G4B	H0Y9G9	81 aa		3.59	□□□□□ -1.83
CNOT2-238	ENST00000552422	LOC110117498	A0A087WWA1	95 aa		3.58	□□□□□ -1.84
CNOT2-238	ENST00000552422	NDUFAF8	A1L188	74 aa		3.58	□□□□□ -1.84
CNOT2-238	ENST00000552422		H3BT86	120 aa		3.58	□□□□□ -1.84
CNOT2-238	ENST00000552422		Q6ZQT0	140 aa		3.58	□□□□□ -1.84
CNOT2-238	ENST00000552422	OBSCN-AS1	Q96MR7	158 aa		3.58	□□□□□ -1.84
CNOT2-238	ENST00000552422	VPS25	Q9BRG1	176 aa		3.57	□□□□□ -1.84
CNOT2-238	ENST00000552422	LINC00472	Q9H8W2	130 aa		3.57	□□□□□ -1.84
CNOT2-238	ENST00000552422	SPCS1	Q9Y6A9	102 aa		3.57	□□□□□ -1.84
CNOT2-238	ENST00000552422	KRTAP16-1	A8MUX0	517 aa		3.56	□□□□□ -1.84
CNOT2-238	ENST00000552422		K7EP34	96 aa		3.56	□□□□□ -1.84
CNOT2-238	ENST00000552422	PDE6G	P18545	87 aa		3.56	□□□□□ -1.84
CNOT2-238	ENST00000552422	RPL37	P61927	97 aa	Known RBP	3.56	□□□□□ -1.84
CNOT2-238	ENST00000552422	MTURN	Q8N3F0	131 aa		3.56	□□□□□ -1.84
CNOT2-238	ENST00000552422	SIGMAR1	Q99720	223 aa		3.56	□□□□□ -1.84
CNOT2-238	ENST00000552422	KRTAP4-1	Q9BYQ7	146 aa		3.56	□□□□□ -1.84
CNOT2-238	ENST00000552422	C14orf132	Q9NPU4	83 aa		3.56	□□□□□ -1.84
CNOT2-238	ENST00000552422		A0A0U1RQV1	116 aa		3.55	□□□□□ -1.84
CNOT2-238	ENST00000552422		A0A1B0GW54	56 aa		3.55	□□□□□ -1.84
CNOT2-238	ENST00000552422	PCOTH	Q58A44	107 aa		3.55	□□□□□ -1.84
CNOT2-238	ENST00000552422	GTF2H5	Q6ZYL4	71 aa		3.55	□□□□□ -1.84
CNOT2-238	ENST00000552422	IGKV4-1	P06312	121 aa		3.54	□□□□□ -1.84
CNOT2-238	ENST00000552422	DEFB116	Q30KQ4	102 aa		3.53	□□□□□ -1.84
CNOT2-238	ENST00000552422		F8W1H4	67 aa		3.52	□□□□□ -1.85
CNOT2-238	ENST00000552422	C20orf166-AS1	Q96NR2	134 aa		3.52	□□□□□ -1.85
CNOT2-238	ENST00000552422	PRO0461	Q9UI25	63 aa		3.52	□□□□□ -1.85
CNOT2-238	ENST00000552422		A8MUU9	505 aa		3.51	□□□□□ -1.85
CNOT2-238	ENST00000552422		J3KT08	172 aa		3.51	□□□□□ -1.85
CNOT2-238	ENST00000552422	DSCR10	P59022	87 aa		3.51	□□□□□ -1.85
CNOT2-238	ENST00000552422	IGHV6-1	A0A0B4J1U7	121 aa		3.5	□□□□□ -1.85
CNOT2-238	ENST00000552422		A0A1B0GVX0	72 aa		3.5	□□□□□ -1.85
CNOT2-238	ENST00000552422	LINC00313	P59037	77 aa		3.5	□□□□□ -1.85
CNOT2-238	ENST00000552422	ATP11AUN	Q6ZP68	121 aa		3.49	□□□□□ -1.85
CNOT2-238	ENST00000552422	PRAC1	Q96KF2	57 aa		3.49	□□□□□ -1.85
CNOT2-238	ENST00000552422		A8MWP4	228 aa		3.48	□□□□□ -1.85
CNOT2-238	ENST00000552422	C8orf87	E5RJ46	101 aa		3.48	□□□□□ -1.85
CNOT2-238	ENST00000552422	NDUFB1	O75438	58 aa		3.47	□□□□□ -1.85
CNOT2-238	ENST00000552422	NREP	Q16612	68 aa		3.47	□□□□□ -1.85
CNOT2-238	ENST00000552422	KRTAP19-2	Q3LHN2	52 aa		3.47	□□□□□ -1.85
CNOT2-238	ENST00000552422	KRTAP4-4	Q9BYR3	166 aa		3.47	□□□□□ -1.85
CNOT2-238	ENST00000552422	IGKV3D-7	A0A0C4DH55	119 aa		3.46	□□□□□ -1.86
CNOT2-238	ENST00000552422	KRTAP5-4	Q6L8H1	288 aa		3.46	□□□□□ -1.86
CNOT2-238	ENST00000552422	FLG	P20930	4061 aa	Predicted RBP	3.45	□□□□□ -1.86
CNOT2-238	ENST00000552422	ETDB	Q3ZM63	59 aa		3.45	□□□□□ -1.86
CNOT2-238	ENST00000552422	PRR15	Q8IV56	129 aa		3.45	□□□□□ -1.86
CNOT2-238	ENST00000552422		Q6ZVQ6	151 aa		3.44	□□□□□ -1.86
CNOT2-238	ENST00000552422	C8orf17	Q9NRJ1	99 aa		3.44	□□□□□ -1.86
CNOT2-238	ENST00000552422		K7EQZ3	153 aa		3.43	□□□□□ -1.86
CNOT2-238	ENST00000552422	LINC00846	Q9NV44	126 aa		3.43	□□□□□ -1.86
CNOT2-238	ENST00000552422	MMP24-AS1	A0A0U1RRL7	71 aa		3.42	□□□□□ -1.86
CNOT2-238	ENST00000552422	BPY2	O14599	106 aa		3.42	□□□□□ -1.86
CNOT2-238	ENST00000552422		K7ERU9	68 aa		3.41	□□□□□ -1.86
CNOT2-238	ENST00000552422	ZCCHC13	Q8WW36	166 aa	Known RBP	3.41	□□□□□ -1.86
CNOT2-238	ENST00000552422	UBL5	Q9BZL1	73 aa		3.41	□□□□□ -1.86
CNOT2-238	ENST00000552422	MT1H	P80294	61 aa		3.4	□□□□□ -1.87
CNOT2-238	ENST00000552422		Q8N9L7	120 aa		3.4	□□□□□ -1.87
CNOT2-238	ENST00000552422	TMEM254	Q8TBM7	123 aa		3.4	□□□□□ -1.87
CNOT2-238	ENST00000552422	hDV103S1	A0JD37	113 aa		3.39	□□□□□ -1.87
CNOT2-238	ENST00000552422		J3QR89	54 aa		3.39	□□□□□ -1.87
CNOT2-238	ENST00000552422	COX6B2	Q6YFQ2	88 aa		3.39	□□□□□ -1.87
CNOT2-238	ENST00000552422	MRPL34	Q9BQ48	92 aa	Known RBP	3.39	□□□□□ -1.87
CNOT2-238	ENST00000552422	FAM240A	A0A1B0GVK7	77 aa		3.37	□□□□□ -1.87
CNOT2-238	ENST00000552422	KRTAP5-9	P26371	169 aa		3.37	□□□□□ -1.87
CNOT2-238	ENST00000552422	HRES1	P13985	223 aa		3.36	□□□□□ -1.87

Retrieved 100 of 20,778 RNA–protein pairs in 298.5 ms