RNA–Protein interactions for RNA: ENST00000551261.5

LETMD1-229, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 521 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-229ENST00000551261 HERC2O95714 4834 aa8.1□□□□□ -1.11
LETMD1-229ENST00000551261 KRTAP29-1A8MX34 341 aaPredicted RBP8.09□□□□□ -1.11
LETMD1-229ENST00000551261 FAT3Q8TDW7 4589 aa8.06□□□□□ -1.12
LETMD1-229ENST00000551261 C8orf17Q9NRJ1 99 aa8.06□□□□□ -1.12
LETMD1-229ENST00000551261 IGHV6-1A0A0B4J1U7 121 aa8.05□□□□□ -1.12
LETMD1-229ENST00000551261 MMP24-AS1A0A0U1RRL7 71 aa8.05□□□□□ -1.12
LETMD1-229ENST00000551261 MT1HL1P0DM35 61 aa8.05□□□□□ -1.12
LETMD1-229ENST00000551261 CASC2Q6XLA1 102 aa8.05□□□□□ -1.12
LETMD1-229ENST00000551261 FP248Q71RG6 208 aaPredicted RBP8.05□□□□□ -1.12
LETMD1-229ENST00000551261 TNXBP22105 4242 aa8.03□□□□□ -1.12
LETMD1-229ENST00000551261 hDV103S1A0JD37 113 aa8.03□□□□□ -1.12
LETMD1-229ENST00000551261 TMEM254Q8TBM7 123 aa8.03□□□□□ -1.12
LETMD1-229ENST00000551261 ANAPC13Q9BS18 74 aa8.03□□□□□ -1.12
LETMD1-229ENST00000551261 LRP1Q07954 4544 aaKnown RBP8.01□□□□□ -1.13
LETMD1-229ENST00000551261 LINC00313P59037 77 aa8□□□□□ -1.13
LETMD1-229ENST00000551261 FLG2Q5D862 2391 aaPredicted RBP8□□□□□ -1.13
LETMD1-229ENST00000551261 TRAV7A0A075B6U4 112 aa7.99□□□□□ -1.13
LETMD1-229ENST00000551261 WFDC13Q8IUB5 93 aa7.99□□□□□ -1.13
LETMD1-229ENST00000551261 KRTAP4-5Q9BYR2 181 aa7.99□□□□□ -1.13
LETMD1-229ENST00000551261 SERP2Q8N6R1 65 aa7.98□□□□□ -1.13
LETMD1-229ENST00000551261 MRPL34Q9BQ48 92 aaKnown RBP7.98□□□□□ -1.13
LETMD1-229ENST00000551261 TP53AIP1Q9HCN2 124 aa7.98□□□□□ -1.13
LETMD1-229ENST00000551261 MYCBP2O75592 4640 aa7.98□□□□□ -1.13
LETMD1-229ENST00000551261 ABCA13Q86UQ4 5058 aa7.97□□□□□ -1.13
LETMD1-229ENST00000551261 OCR1Q9BZK8 76 aa7.95□□□□□ -1.14
LETMD1-229ENST00000551261 PCP4P48539 62 aa7.94□□□□□ -1.14
LETMD1-229ENST00000551261 UQCRQO14949 82 aa7.93□□□□□ -1.14
LETMD1-229ENST00000551261 COX7CP15954 63 aa7.93□□□□□ -1.14
LETMD1-229ENST00000551261 J3QL48 77 aa7.92□□□□□ -1.14
LETMD1-229ENST00000551261 Q8N9P0 234 aaPredicted RBP7.91□□□□□ -1.14
LETMD1-229ENST00000551261 RETNLBQ9BQ08 111 aa7.9□□□□□ -1.14
LETMD1-229ENST00000551261 KRTAP16-1A8MUX0 517 aa7.89□□□□□ -1.15
LETMD1-229ENST00000551261 C5orf47Q569G3 176 aa7.89□□□□□ -1.15
LETMD1-229ENST00000551261 NOTCH2NLQ7Z3S9 236 aa7.89□□□□□ -1.15
LETMD1-229ENST00000551261 H3BPC8 53 aa7.87□□□□□ -1.15
LETMD1-229ENST00000551261 NDUFS5O43920 106 aa7.87□□□□□ -1.15
LETMD1-229ENST00000551261 DMBT1Q9UGM3 2413 aaPredicted RBP7.87□□□□□ -1.15
LETMD1-229ENST00000551261 IGLV7-46A0A075B6I9 117 aa7.86□□□□□ -1.15
LETMD1-229ENST00000551261 TRAV22A0A0B4J277 110 aa7.85□□□□□ -1.15
LETMD1-229ENST00000551261 MP68P56378 58 aa7.85□□□□□ -1.15
LETMD1-229ENST00000551261 C20orf166-AS1Q96NR2 134 aa7.83□□□□□ -1.16
LETMD1-229ENST00000551261 PCLOQ9Y6V0 5065 aa7.82□□□□□ -1.16
LETMD1-229ENST00000551261 TPRXLQ17RH7 258 aa7.81□□□□□ -1.16
LETMD1-229ENST00000551261 A8MUU9 505 aa7.8□□□□□ -1.16
LETMD1-229ENST00000551261 KLKP1Q107X0 134 aa7.8□□□□□ -1.16
LETMD1-229ENST00000551261 PRR4Q16378 134 aa7.8□□□□□ -1.16
LETMD1-229ENST00000551261 KRTAP13-3Q3SY46 172 aa7.8□□□□□ -1.16
LETMD1-229ENST00000551261 C9orf92A6NGG3 77 aa7.79□□□□□ -1.16
LETMD1-229ENST00000551261 Q75L30 129 aa7.79□□□□□ -1.16
LETMD1-229ENST00000551261 H0Y9P7 68 aa7.78□□□□□ -1.16
LETMD1-229ENST00000551261 NDUFC1O43677 76 aa7.78□□□□□ -1.16
LETMD1-229ENST00000551261 C20orf197Q8N268 126 aa7.78□□□□□ -1.16
LETMD1-229ENST00000551261 A0A0U1RQV1 116 aa7.76□□□□□ -1.17
LETMD1-229ENST00000551261 CCDC179H3BU77 68 aa7.76□□□□□ -1.17
LETMD1-229ENST00000551261 LOC101927531A0A1B0GV80 90 aa7.75□□□□□ -1.17
LETMD1-229ENST00000551261 ZCCHC13Q8WW36 166 aaKnown RBP7.73□□□□□ -1.17
LETMD1-229ENST00000551261 XP32Q5T750 250 aa7.71□□□□□ -1.18
LETMD1-229ENST00000551261 C1orf64Q8NEQ6 169 aa7.71□□□□□ -1.18
LETMD1-229ENST00000551261 LINC00208Q96KT6 92 aa7.71□□□□□ -1.18
LETMD1-229ENST00000551261 RPL37P61927 97 aaKnown RBP7.7□□□□□ -1.18
LETMD1-229ENST00000551261 Q5W150 140 aa7.67□□□□□ -1.18
LETMD1-229ENST00000551261 ATP11AUNQ6ZP68 121 aa7.67□□□□□ -1.18
LETMD1-229ENST00000551261 SNURFQ9Y675 71 aa7.67□□□□□ -1.18
LETMD1-229ENST00000551261 TMEM258P61165 79 aa7.64□□□□□ -1.19
LETMD1-229ENST00000551261 IGKV2-30P06310 120 aa7.63□□□□□ -1.19
LETMD1-229ENST00000551261 C7orf65Q6ZTY9 151 aa7.63□□□□□ -1.19
LETMD1-229ENST00000551261 H7BZZ5 65 aa7.62□□□□□ -1.19
LETMD1-229ENST00000551261 ATP5EP56381 51 aaPredicted RBP7.62□□□□□ -1.19
LETMD1-229ENST00000551261 KRTAP3-3Q9BYR6 98 aa7.61□□□□□ -1.19
LETMD1-229ENST00000551261 KRTAP3-2Q9BYR7 98 aa7.61□□□□□ -1.19
LETMD1-229ENST00000551261 CYP4F30PQ9H0H9 118 aa7.6□□□□□ -1.19
LETMD1-229ENST00000551261 SPANXA2-OT1Q8N9U9 137 aa7.59□□□□□ -1.19
LETMD1-229ENST00000551261 CYSTM1Q9H1C7 97 aa7.57□□□□□ -1.2
LETMD1-229ENST00000551261 SEC61BP60468 96 aaKnown RBP7.56□□□□□ -1.2
LETMD1-229ENST00000551261 IGKV2D-30A0A075B6S6 120 aa7.55□□□□□ -1.2
LETMD1-229ENST00000551261 FAM236DA0A1B0GTK5 79 aa7.53□□□□□ -1.2
LETMD1-229ENST00000551261 FAM236CP0DP71 79 aa7.53□□□□□ -1.2
LETMD1-229ENST00000551261 SPINK7P58062 85 aa7.5□□□□□ -1.21
LETMD1-229ENST00000551261 PCOTHQ58A44 107 aa7.5□□□□□ -1.21
LETMD1-229ENST00000551261 HMCN2Q8NDA2 5059 aa7.48□□□□□ -1.21
LETMD1-229ENST00000551261 HRES1P13985 223 aa7.46□□□□□ -1.22
LETMD1-229ENST00000551261 HERC1Q15751 4861 aa7.45□□□□□ -1.22
LETMD1-229ENST00000551261 A8MUN3 132 aa7.44□□□□□ -1.22
LETMD1-229ENST00000551261 DMAC1Q96GE9 116 aa7.41□□□□□ -1.22
LETMD1-229ENST00000551261 LRP2P98164 4655 aa7.41□□□□□ -1.22
LETMD1-229ENST00000551261 LPAP08519 4548 aa7.39□□□□□ -1.23
LETMD1-229ENST00000551261 SERP1Q9Y6X1 66 aa7.38□□□□□ -1.23
LETMD1-229ENST00000551261 ACYP2P14621 99 aa7.37□□□□□ -1.23
LETMD1-229ENST00000551261 RPS28P62857 69 aaKnown RBP7.35□□□□□ -1.23
LETMD1-229ENST00000551261 COX6B2Q6YFQ2 88 aa7.35□□□□□ -1.23
LETMD1-229ENST00000551261 MUC17Q685J3 4493 aa7.34□□□□□ -1.23
LETMD1-229ENST00000551261 C4orf26Q17RF5 130 aa7.33□□□□□ -1.24
LETMD1-229ENST00000551261 RBM12B-AS1Q9P1G2 102 aa7.33□□□□□ -1.24
LETMD1-229ENST00000551261 MPLKIPQ8TAP9 179 aa7.3□□□□□ -1.24
LETMD1-229ENST00000551261 COA5Q86WW8 74 aa7.27□□□□□ -1.25
LETMD1-229ENST00000551261 UBR4Q5T4S7 5183 aa7.26□□□□□ -1.25
LETMD1-229ENST00000551261 CHKB-CPT1BH3BT56 60 aa7.24□□□□□ -1.25
LETMD1-229ENST00000551261 SPTSSBQ8NFR3 76 aa7.21□□□□□ -1.26
LETMD1-229ENST00000551261 KRTAP3-1Q9BYR8 98 aa7.2□□□□□ -1.26
LETMD1-229ENST00000551261 H1FX-AS1Q4G0G2 97 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms