RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 ELOF1P60002 83 aaKnown RBP2.48□□□□□ -2.01
CPSF6-206ENST00000550987 Q6ZRN7 208 aaPredicted RBP2.48□□□□□ -2.01
CPSF6-206ENST00000550987 TRAV22A0A0B4J277 110 aa2.47□□□□□ -2.01
CPSF6-206ENST00000550987 TMEM14DPA8MWL7 114 aa2.47□□□□□ -2.01
CPSF6-206ENST00000550987 UBE2D1P51668 147 aa2.47□□□□□ -2.01
CPSF6-206ENST00000550987 ZNF56Q15929 161 aa2.47□□□□□ -2.01
CPSF6-206ENST00000550987 C1orf137Q5JT78 98 aa2.47□□□□□ -2.01
CPSF6-206ENST00000550987 Q6ZTI0 123 aa2.47□□□□□ -2.01
CPSF6-206ENST00000550987 TMEM167AQ8TBQ9 72 aa2.47□□□□□ -2.01
CPSF6-206ENST00000550987 IFI27L1Q96BM0 104 aa2.47□□□□□ -2.01
CPSF6-206ENST00000550987 CYSTM1Q9H1C7 97 aa2.47□□□□□ -2.01
CPSF6-206ENST00000550987 ORMDL1Q9P0S3 153 aa2.47□□□□□ -2.01
CPSF6-206ENST00000550987 HMCN1Q96RW7 5635 aa2.47□□□□□ -2.01
CPSF6-206ENST00000550987 TRBV6-7A0A0A0MS04 114 aa2.46□□□□□ -2.02
CPSF6-206ENST00000550987 A0A0G2JQZ4 141 aa2.46□□□□□ -2.02
CPSF6-206ENST00000550987 ZNF815PA8K554 130 aa2.46□□□□□ -2.02
CPSF6-206ENST00000550987 HIGD1CA8MV81 97 aa2.46□□□□□ -2.02
CPSF6-206ENST00000550987 CHKB-CPT1BH3BT56 60 aa2.46□□□□□ -2.02
CPSF6-206ENST00000550987 K7EIM0 57 aa2.46□□□□□ -2.02
CPSF6-206ENST00000550987 MT1HP80294 61 aa2.46□□□□□ -2.02
CPSF6-206ENST00000550987 WT1-ASQ06250 92 aa2.46□□□□□ -2.02
CPSF6-206ENST00000550987 LENEPQ9Y5L5 61 aa2.46□□□□□ -2.02
CPSF6-206ENST00000550987 A0A087WTM6 91 aa2.45□□□□□ -2.02
CPSF6-206ENST00000550987 DEFB130BP0DP73 79 aa2.45□□□□□ -2.02
CPSF6-206ENST00000550987 DEFB130AP0DP74 79 aa2.45□□□□□ -2.02
CPSF6-206ENST00000550987 COX8AP10176 69 aa2.45□□□□□ -2.02
CPSF6-206ENST00000550987 Q5VV11 94 aa2.45□□□□□ -2.02
CPSF6-206ENST00000550987 ARHGAP5-AS1Q96IT6 56 aa2.45□□□□□ -2.02
CPSF6-206ENST00000550987 AMELXQ99217 191 aa2.45□□□□□ -2.02
CPSF6-206ENST00000550987 PRO2289Q9P1D8 64 aa2.45□□□□□ -2.02
CPSF6-206ENST00000550987 V9GYH0 126 aa2.45□□□□□ -2.02
CPSF6-206ENST00000550987 A0A0J9YY99 117 aa2.44□□□□□ -2.02
CPSF6-206ENST00000550987 MYMXA0A1B0GTQ4 84 aa2.44□□□□□ -2.02
CPSF6-206ENST00000550987 I3L2K1 104 aa2.44□□□□□ -2.02
CPSF6-206ENST00000550987 DEFB1P60022 68 aa2.44□□□□□ -2.02
CPSF6-206ENST00000550987 GDF5OSQ5U4N7 250 aa2.44□□□□□ -2.02
CPSF6-206ENST00000550987 ATP5EP2Q5VTU8 51 aa2.44□□□□□ -2.02
CPSF6-206ENST00000550987 Q86TA4 180 aa2.44□□□□□ -2.02
CPSF6-206ENST00000550987 CDC42SE2Q9NRR3 84 aa2.44□□□□□ -2.02
CPSF6-206ENST00000550987 NDUFA4L2Q9NRX3 87 aa2.44□□□□□ -2.02
CPSF6-206ENST00000550987 TEX49A0A1B0GTD5 131 aa2.43□□□□□ -2.02
CPSF6-206ENST00000550987 LOC101927531A0A1B0GV80 90 aa2.43□□□□□ -2.02
CPSF6-206ENST00000550987 KRTAP5-9P26371 169 aa2.43□□□□□ -2.02
CPSF6-206ENST00000550987 CNBPP62633 177 aaKnown RBP2.43□□□□□ -2.02
CPSF6-206ENST00000550987 C20orf197Q8N268 126 aa2.43□□□□□ -2.02
CPSF6-206ENST00000550987 C9orf163Q8N9P6 203 aa2.43□□□□□ -2.02
CPSF6-206ENST00000550987 MRPL36Q9P0J6 103 aaKnown RBP2.43□□□□□ -2.02
CPSF6-206ENST00000550987 CEBPZOSA8MTT3 80 aa2.42□□□□□ -2.02
CPSF6-206ENST00000550987 F8WEM9 126 aa2.42□□□□□ -2.02
CPSF6-206ENST00000550987 IGHV3-30P01768 117 aa2.42□□□□□ -2.02
CPSF6-206ENST00000550987 IGHV3-30-5P0DP03 117 aa2.42□□□□□ -2.02
CPSF6-206ENST00000550987 KRTAP19-6Q3LI70 58 aa2.42□□□□□ -2.02
CPSF6-206ENST00000550987 TRBV6-8A0A0A6YYG3 113 aa2.41□□□□□ -2.02
CPSF6-206ENST00000550987 GCHFRP30047 84 aa2.41□□□□□ -2.02
CPSF6-206ENST00000550987 SSBP1Q04837 148 aaKnown RBP2.41□□□□□ -2.02
CPSF6-206ENST00000550987 Q6JHZ5 121 aa2.41□□□□□ -2.02
CPSF6-206ENST00000550987 CSAG1Q6PB30 78 aa2.41□□□□□ -2.02
CPSF6-206ENST00000550987 PPP1R1CQ8WVI7 109 aa2.41□□□□□ -2.02
CPSF6-206ENST00000550987 A0A096LPF7 62 aa2.4□□□□□ -2.03
CPSF6-206ENST00000550987 Q6ZSA8 131 aa2.4□□□□□ -2.03
CPSF6-206ENST00000550987 TIMM8BQ9Y5J9 83 aaPredicted RBP2.4□□□□□ -2.03
CPSF6-206ENST00000550987 H3BNG1 76 aa2.39□□□□□ -2.03
CPSF6-206ENST00000550987 HTN1P15515 57 aa2.39□□□□□ -2.03
CPSF6-206ENST00000550987 FAM74A4Q5TZK3 123 aa2.39□□□□□ -2.03
CPSF6-206ENST00000550987 NOP10Q9NPE3 64 aaKnown RBP2.39□□□□□ -2.03
CPSF6-206ENST00000550987 SNRPGP15A8MWD9 76 aa2.38□□□□□ -2.03
CPSF6-206ENST00000550987 C3orf79P0CE67 100 aa2.38□□□□□ -2.03
CPSF6-206ENST00000550987 IFI27P40305 119 aaPredicted RBP2.38□□□□□ -2.03
CPSF6-206ENST00000550987 SPINK13Q1W4C9 94 aa2.38□□□□□ -2.03
CPSF6-206ENST00000550987 SPINK9Q5DT21 86 aa2.38□□□□□ -2.03
CPSF6-206ENST00000550987 SFTA2Q6UW10 78 aa2.38□□□□□ -2.03
CPSF6-206ENST00000550987 ZCCHC13Q8WW36 166 aaKnown RBP2.38□□□□□ -2.03
CPSF6-206ENST00000550987 TRBV6-4A0A1B0GX49 114 aa2.37□□□□□ -2.03
CPSF6-206ENST00000550987 A8MTW9 85 aa2.37□□□□□ -2.03
CPSF6-206ENST00000550987 LEPROTL1O95214 131 aa2.37□□□□□ -2.03
CPSF6-206ENST00000550987 PPP1R17O96001 155 aa2.37□□□□□ -2.03
CPSF6-206ENST00000550987 PPYP01298 95 aa2.37□□□□□ -2.03
CPSF6-206ENST00000550987 ARMS2P0C7Q2 107 aa2.37□□□□□ -2.03
CPSF6-206ENST00000550987 FXYD4P59646 89 aa2.37□□□□□ -2.03
CPSF6-206ENST00000550987 PRCDQ00LT1 54 aa2.37□□□□□ -2.03
CPSF6-206ENST00000550987 SPAG11BQ08648 103 aa2.37□□□□□ -2.03
CPSF6-206ENST00000550987 TPRXLQ17RH7 258 aa2.37□□□□□ -2.03
CPSF6-206ENST00000550987 SPAG11AQ6PDA7 123 aa2.37□□□□□ -2.03
CPSF6-206ENST00000550987 D6R8Y8 96 aa2.36□□□□□ -2.03
CPSF6-206ENST00000550987 JMJD7-PLA2G4BH0Y9G9 81 aa2.36□□□□□ -2.03
CPSF6-206ENST00000550987 DNAL4O96015 105 aa2.36□□□□□ -2.03
CPSF6-206ENST00000550987 PDE6GP18545 87 aa2.36□□□□□ -2.03
CPSF6-206ENST00000550987 RPL37AP61513 92 aaKnown RBP2.36□□□□□ -2.03
CPSF6-206ENST00000550987 BAGE3Q86Y29 109 aa2.36□□□□□ -2.03
CPSF6-206ENST00000550987 BAGE2Q86Y30 109 aa2.36□□□□□ -2.03
CPSF6-206ENST00000550987 MUSTN1Q8IVN3 82 aa2.36□□□□□ -2.03
CPSF6-206ENST00000550987 PSENENQ9NZ42 101 aa2.36□□□□□ -2.03
CPSF6-206ENST00000550987 GNG13Q9P2W3 67 aa2.36□□□□□ -2.03
CPSF6-206ENST00000550987 ARL2-SNX15V9GYD0 113 aa2.36□□□□□ -2.03
CPSF6-206ENST00000550987 FLGP20930 4061 aaPredicted RBP2.36□□□□□ -2.03
CPSF6-206ENST00000550987 MUC5ACP98088 5654 aa2.35□□□□□ -2.03
CPSF6-206ENST00000550987 WFDC10BQ8IUB3 73 aa2.35□□□□□ -2.03
CPSF6-206ENST00000550987 COX7B2Q8TF08 81 aa2.35□□□□□ -2.03
CPSF6-206ENST00000550987 TMEM263Q8WUH6 116 aaKnown RBP2.35□□□□□ -2.03
CPSF6-206ENST00000550987 UBE2D4Q9Y2X8 147 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms