RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 A0A0U1RQV1 116 aa12.18□□□□□ -0.46
PRDM4-205ENST00000550376 hDV103S1A0JD37 113 aa12.15□□□□□ -0.46
PRDM4-205ENST00000550376 CDK2AP2O75956 126 aa12.15□□□□□ -0.47
PRDM4-205ENST00000550376 A0A1B0GVX0 72 aa12.13□□□□□ -0.47
PRDM4-205ENST00000550376 C8orf17Q9NRJ1 99 aa12.13□□□□□ -0.47
PRDM4-205ENST00000550376 FAM229BQ4G0N7 80 aa12.12□□□□□ -0.47
PRDM4-205ENST00000550376 FP248Q71RG6 208 aaPredicted RBP12.11□□□□□ -0.47
PRDM4-205ENST00000550376 CD164Q04900 197 aa12.1□□□□□ -0.47
PRDM4-205ENST00000550376 PRR26Q8N8Z3 221 aa12.1□□□□□ -0.47
PRDM4-205ENST00000550376 TYMSOSQ8TAI1 123 aa12.08□□□□□ -0.48
PRDM4-205ENST00000550376 SMIM26A0A096LP01 95 aa12.05□□□□□ -0.48
PRDM4-205ENST00000550376 NDUFS5O43920 106 aa12.05□□□□□ -0.48
PRDM4-205ENST00000550376 LINC00208Q96KT6 92 aa12.04□□□□□ -0.48
PRDM4-205ENST00000550376 C1orf195Q5TG92 126 aa12.03□□□□□ -0.48
PRDM4-205ENST00000550376 KRTAP10-4P60372 401 aaPredicted RBP12.02□□□□□ -0.48
PRDM4-205ENST00000550376 ASB16-AS1Q495Z4 193 aa12.02□□□□□ -0.49
PRDM4-205ENST00000550376 PRO0628Q9UI54 55 aa12.02□□□□□ -0.49
PRDM4-205ENST00000550376 H0Y9P7 68 aa12.01□□□□□ -0.49
PRDM4-205ENST00000550376 ZCCHC13Q8WW36 166 aaKnown RBP12.01□□□□□ -0.49
PRDM4-205ENST00000550376 NDUFC1O43677 76 aa12□□□□□ -0.49
PRDM4-205ENST00000550376 MP68P56378 58 aa11.98□□□□□ -0.49
PRDM4-205ENST00000550376 C4orf48Q5BLP8 95 aa11.98□□□□□ -0.49
PRDM4-205ENST00000550376 MRPL34Q9BQ48 92 aaKnown RBP11.97□□□□□ -0.49
PRDM4-205ENST00000550376 PRR4Q16378 134 aa11.96□□□□□ -0.49
PRDM4-205ENST00000550376 HSPG2P98160 4391 aa11.92□□□□□ -0.5
PRDM4-205ENST00000550376 TRAV22A0A0B4J277 110 aa11.92□□□□□ -0.5
PRDM4-205ENST00000550376 ATP5EP56381 51 aaPredicted RBP11.92□□□□□ -0.5
PRDM4-205ENST00000550376 C1orf64Q8NEQ6 169 aa11.92□□□□□ -0.5
PRDM4-205ENST00000550376 MPLKIPQ8TAP9 179 aa11.91□□□□□ -0.5
PRDM4-205ENST00000550376 LRP1Q07954 4544 aaKnown RBP11.91□□□□□ -0.5
PRDM4-205ENST00000550376 LINC00304Q8N9R0 145 aa11.89□□□□□ -0.51
PRDM4-205ENST00000550376 LINC00313P59037 77 aa11.88□□□□□ -0.51
PRDM4-205ENST00000550376 LIMD2Q9BT23 127 aa11.88□□□□□ -0.51
PRDM4-205ENST00000550376 BRK1Q8WUW1 75 aa11.87□□□□□ -0.51
PRDM4-205ENST00000550376 SPINK1P00995 79 aa11.87□□□□□ -0.51
PRDM4-205ENST00000550376 Q5W150 140 aa11.86□□□□□ -0.51
PRDM4-205ENST00000550376 KIAA1109Q2LD37 5005 aa11.86□□□□□ -0.51
PRDM4-205ENST00000550376 PKHD1L1Q86WI1 4243 aa11.86□□□□□ -0.51
PRDM4-205ENST00000550376 RETNLBQ9BQ08 111 aa11.85□□□□□ -0.51
PRDM4-205ENST00000550376 TP53AIP1Q9HCN2 124 aa11.84□□□□□ -0.51
PRDM4-205ENST00000550376 PCOTHQ58A44 107 aa11.82□□□□□ -0.52
PRDM4-205ENST00000550376 KRTAP17-1Q9BYP8 105 aa11.82□□□□□ -0.52
PRDM4-205ENST00000550376 EPPK1P58107 5090 aaKnown RBP11.82□□□□□ -0.52
PRDM4-205ENST00000550376 RYR1P21817 5038 aa11.81□□□□□ -0.52
PRDM4-205ENST00000550376 FLG2Q5D862 2391 aaPredicted RBP11.8□□□□□ -0.52
PRDM4-205ENST00000550376 C8orf87E5RJ46 101 aa11.79□□□□□ -0.52
PRDM4-205ENST00000550376 FAM229AH3BQW9 127 aa11.77□□□□□ -0.53
PRDM4-205ENST00000550376 H3BPC8 53 aa11.75□□□□□ -0.53
PRDM4-205ENST00000550376 Q5VSD8 79 aa11.75□□□□□ -0.53
PRDM4-205ENST00000550376 KRTAP16-1A8MUX0 517 aa11.74□□□□□ -0.53
PRDM4-205ENST00000550376 SPAG11AQ6PDA7 123 aa11.71□□□□□ -0.53
PRDM4-205ENST00000550376 KRTAP13-3Q3SY46 172 aa11.7□□□□□ -0.54
PRDM4-205ENST00000550376 MYCBP2O75592 4640 aa11.69□□□□□ -0.54
PRDM4-205ENST00000550376 Q8N9P0 234 aaPredicted RBP11.69□□□□□ -0.54
PRDM4-205ENST00000550376 TNXBP22105 4242 aa11.66□□□□□ -0.54
PRDM4-205ENST00000550376 C9orf92A6NGG3 77 aa11.66□□□□□ -0.54
PRDM4-205ENST00000550376 DMBT1Q9UGM3 2413 aaPredicted RBP11.66□□□□□ -0.54
PRDM4-205ENST00000550376 Q8N1X5 172 aa11.64□□□□□ -0.55
PRDM4-205ENST00000550376 RPS29P62273 56 aaKnown RBP11.63□□□□□ -0.55
PRDM4-205ENST00000550376 CYP4F30PQ9H0H9 118 aa11.61□□□□□ -0.55
PRDM4-205ENST00000550376 SPANXA2-OT1Q8N9U9 137 aa11.58□□□□□ -0.56
PRDM4-205ENST00000550376 IGLV7-46A0A075B6I9 117 aa11.56□□□□□ -0.56
PRDM4-205ENST00000550376 FAT3Q8TDW7 4589 aa11.56□□□□□ -0.56
PRDM4-205ENST00000550376 LOC101927531A0A1B0GV80 90 aa11.56□□□□□ -0.56
PRDM4-205ENST00000550376 PSPHP1O15172 72 aa11.54□□□□□ -0.56
PRDM4-205ENST00000550376 Q1T7F1 81 aa11.54□□□□□ -0.56
PRDM4-205ENST00000550376 KRTAP10-8P60410 259 aa11.52□□□□□ -0.56
PRDM4-205ENST00000550376 V9GYY9 64 aa11.52□□□□□ -0.56
PRDM4-205ENST00000550376 IGKV2D-30A0A075B6S6 120 aa11.51□□□□□ -0.57
PRDM4-205ENST00000550376 IGKV2-30P06310 120 aa11.51□□□□□ -0.57
PRDM4-205ENST00000550376 HRES1P13985 223 aa11.46□□□□□ -0.58
PRDM4-205ENST00000550376 COA5Q86WW8 74 aa11.43□□□□□ -0.58
PRDM4-205ENST00000550376 A8MUN3 132 aa11.4□□□□□ -0.58
PRDM4-205ENST00000550376 SEC61GP60059 68 aa11.4□□□□□ -0.58
PRDM4-205ENST00000550376 KRTAP4-5Q9BYR2 181 aa11.37□□□□□ -0.59
PRDM4-205ENST00000550376 A8MU10 97 aa11.36□□□□□ -0.59
PRDM4-205ENST00000550376 MT1HL1P0DM35 61 aa11.34□□□□□ -0.59
PRDM4-205ENST00000550376 PMAIP1Q13794 54 aa11.34□□□□□ -0.59
PRDM4-205ENST00000550376 C20orf166-AS1Q96NR2 134 aa11.33□□□□□ -0.6
PRDM4-205ENST00000550376 A8MUU9 505 aa11.32□□□□□ -0.6
PRDM4-205ENST00000550376 Q5VV11 94 aa11.3□□□□□ -0.6
PRDM4-205ENST00000550376 ABCA13Q86UQ4 5058 aa11.26□□□□□ -0.61
PRDM4-205ENST00000550376 C7orf65Q6ZTY9 151 aa11.23□□□□□ -0.61
PRDM4-205ENST00000550376 DMAC1Q96GE9 116 aa11.23□□□□□ -0.61
PRDM4-205ENST00000550376 CHKB-CPT1BH3BT56 60 aa11.22□□□□□ -0.61
PRDM4-205ENST00000550376 ACYP2P14621 99 aa11.22□□□□□ -0.61
PRDM4-205ENST00000550376 PRR15LQ9BU68 103 aa11.2□□□□□ -0.62
PRDM4-205ENST00000550376 SPINK7P58062 85 aa11.15□□□□□ -0.62
PRDM4-205ENST00000550376 Q75L30 129 aa11.15□□□□□ -0.62
PRDM4-205ENST00000550376 SPTSSBQ8NFR3 76 aa11.11□□□□□ -0.63
PRDM4-205ENST00000550376 LPAP08519 4548 aa11.11□□□□□ -0.63
PRDM4-205ENST00000550376 XP32Q5T750 250 aa11.11□□□□□ -0.63
PRDM4-205ENST00000550376 LCA10Q71F78 164 aa11.09□□□□□ -0.63
PRDM4-205ENST00000550376 LRP2P98164 4655 aa11.08□□□□□ -0.64
PRDM4-205ENST00000550376 HERC2O95714 4834 aa11.07□□□□□ -0.64
PRDM4-205ENST00000550376 ATP11AUNQ6ZP68 121 aa11.07□□□□□ -0.64
PRDM4-205ENST00000550376 A6NED7 52 aa11.06□□□□□ -0.64
PRDM4-205ENST00000550376 KRTAP3-1Q9BYR8 98 aa11.02□□□□□ -0.65
PRDM4-205ENST00000550376 RPL37P61927 97 aaKnown RBP11.02□□□□□ -0.65
PRDM4-205ENST00000550376 LINC01558Q9Y6Z2 57 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms