RNA–Protein interactions for RNA: ENST00000549655.5

BRF1-215, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-215ENST00000549655 C5orf47Q569G3 176 aa11.05□□□□□ -0.64
BRF1-215ENST00000549655 NDUFC1O43677 76 aa11.03□□□□□ -0.64
BRF1-215ENST00000549655 C4orf48Q5BLP8 95 aa11.02□□□□□ -0.65
BRF1-215ENST00000549655 NOTCH2NLQ7Z3S9 236 aa11.02□□□□□ -0.65
BRF1-215ENST00000549655 PRR26Q8N8Z3 221 aa11.02□□□□□ -0.65
BRF1-215ENST00000549655 C1orf195Q5TG92 126 aa11.01□□□□□ -0.65
BRF1-215ENST00000549655 LIMD2Q9BT23 127 aa11□□□□□ -0.65
BRF1-215ENST00000549655 SPINK1P00995 79 aa10.97□□□□□ -0.65
BRF1-215ENST00000549655 FAT1Q14517 4588 aa10.97□□□□□ -0.65
BRF1-215ENST00000549655 MP68P56378 58 aa10.96□□□□□ -0.66
BRF1-215ENST00000549655 ZCCHC13Q8WW36 166 aaKnown RBP10.96□□□□□ -0.66
BRF1-215ENST00000549655 FAM236DA0A1B0GTK5 79 aa10.95□□□□□ -0.66
BRF1-215ENST00000549655 FAM236CP0DP71 79 aa10.95□□□□□ -0.66
BRF1-215ENST00000549655 MRPL34Q9BQ48 92 aaKnown RBP10.95□□□□□ -0.66
BRF1-215ENST00000549655 H0Y9P7 68 aa10.93□□□□□ -0.66
BRF1-215ENST00000549655 LINC00304Q8N9R0 145 aa10.93□□□□□ -0.66
BRF1-215ENST00000549655 TP53AIP1Q9HCN2 124 aa10.92□□□□□ -0.66
BRF1-215ENST00000549655 NDUFS5O43920 106 aa10.92□□□□□ -0.66
BRF1-215ENST00000549655 C8orf87E5RJ46 101 aa10.91□□□□□ -0.66
BRF1-215ENST00000549655 RYR3Q15413 4870 aa10.91□□□□□ -0.66
BRF1-215ENST00000549655 LINC00208Q96KT6 92 aa10.9□□□□□ -0.66
BRF1-215ENST00000549655 TRAV22A0A0B4J277 110 aa10.89□□□□□ -0.67
BRF1-215ENST00000549655 FAM229AH3BQW9 127 aa10.88□□□□□ -0.67
BRF1-215ENST00000549655 SPAG11AQ6PDA7 123 aa10.88□□□□□ -0.67
BRF1-215ENST00000549655 H3BPC8 53 aa10.87□□□□□ -0.67
BRF1-215ENST00000549655 LINC00313P59037 77 aa10.87□□□□□ -0.67
BRF1-215ENST00000549655 RPS29P62273 56 aaKnown RBP10.86□□□□□ -0.67
BRF1-215ENST00000549655 RPS28P62857 69 aaKnown RBP10.85□□□□□ -0.67
BRF1-215ENST00000549655 ATP5EP56381 51 aaPredicted RBP10.83□□□□□ -0.68
BRF1-215ENST00000549655 C1orf64Q8NEQ6 169 aa10.83□□□□□ -0.68
BRF1-215ENST00000549655 Q5VSD8 79 aa10.81□□□□□ -0.68
BRF1-215ENST00000549655 SERP1Q9Y6X1 66 aa10.76□□□□□ -0.69
BRF1-215ENST00000549655 OXTP01178 125 aa10.76□□□□□ -0.69
BRF1-215ENST00000549655 HSPG2P98160 4391 aa10.75□□□□□ -0.69
BRF1-215ENST00000549655 KRTAP16-1A8MUX0 517 aa10.74□□□□□ -0.69
BRF1-215ENST00000549655 Q8N9P0 234 aaPredicted RBP10.74□□□□□ -0.69
BRF1-215ENST00000549655 Q5W150 140 aa10.74□□□□□ -0.69
BRF1-215ENST00000549655 PKHD1L1Q86WI1 4243 aa10.73□□□□□ -0.69
BRF1-215ENST00000549655 KRTAP13-3Q3SY46 172 aa10.7□□□□□ -0.7
BRF1-215ENST00000549655 KRTAP17-1Q9BYP8 105 aa10.68□□□□□ -0.7
BRF1-215ENST00000549655 PRR4Q16378 134 aa10.68□□□□□ -0.7
BRF1-215ENST00000549655 RYR1P21817 5038 aa10.67□□□□□ -0.7
BRF1-215ENST00000549655 PCOTHQ58A44 107 aa10.65□□□□□ -0.7
BRF1-215ENST00000549655 SPANXA2-OT1Q8N9U9 137 aa10.65□□□□□ -0.7
BRF1-215ENST00000549655 CYP4F30PQ9H0H9 118 aa10.64□□□□□ -0.71
BRF1-215ENST00000549655 LOC101927531A0A1B0GV80 90 aa10.63□□□□□ -0.71
BRF1-215ENST00000549655 KRTAP10-8P60410 259 aa10.63□□□□□ -0.71
BRF1-215ENST00000549655 Q8N1X5 172 aa10.63□□□□□ -0.71
BRF1-215ENST00000549655 RETNLBQ9BQ08 111 aa10.63□□□□□ -0.71
BRF1-215ENST00000549655 FLG2Q5D862 2391 aaPredicted RBP10.61□□□□□ -0.71
BRF1-215ENST00000549655 LRP1Q07954 4544 aaKnown RBP10.57□□□□□ -0.72
BRF1-215ENST00000549655 KIAA1109Q2LD37 5005 aa10.57□□□□□ -0.72
BRF1-215ENST00000549655 IGLV7-46A0A075B6I9 117 aa10.57□□□□□ -0.72
BRF1-215ENST00000549655 C9orf92A6NGG3 77 aa10.54□□□□□ -0.72
BRF1-215ENST00000549655 TNXBP22105 4242 aa10.53□□□□□ -0.72
BRF1-215ENST00000549655 EPPK1P58107 5090 aaKnown RBP10.52□□□□□ -0.73
BRF1-215ENST00000549655 SMIM26A0A096LP01 95 aa10.52□□□□□ -0.73
BRF1-215ENST00000549655 IGKV2-30P06310 120 aa10.5□□□□□ -0.73
BRF1-215ENST00000549655 FP248Q71RG6 208 aaPredicted RBP10.46□□□□□ -0.74
BRF1-215ENST00000549655 C20orf166-AS1Q96NR2 134 aa10.45□□□□□ -0.74
BRF1-215ENST00000549655 DMBT1Q9UGM3 2413 aaPredicted RBP10.45□□□□□ -0.74
BRF1-215ENST00000549655 A8MUU9 505 aa10.44□□□□□ -0.74
BRF1-215ENST00000549655 MT1HL1P0DM35 61 aa10.43□□□□□ -0.74
BRF1-215ENST00000549655 FAT3Q8TDW7 4589 aa10.43□□□□□ -0.74
BRF1-215ENST00000549655 IGKV2D-30A0A075B6S6 120 aa10.43□□□□□ -0.74
BRF1-215ENST00000549655 HRES1P13985 223 aa10.41□□□□□ -0.74
BRF1-215ENST00000549655 COA5Q86WW8 74 aa10.38□□□□□ -0.75
BRF1-215ENST00000549655 C4orf26Q17RF5 130 aa10.36□□□□□ -0.75
BRF1-215ENST00000549655 MYCBP2O75592 4640 aa10.36□□□□□ -0.75
BRF1-215ENST00000549655 MPLKIPQ8TAP9 179 aa10.35□□□□□ -0.75
BRF1-215ENST00000549655 C7orf65Q6ZTY9 151 aa10.32□□□□□ -0.76
BRF1-215ENST00000549655 KRTAP4-5Q9BYR2 181 aa10.32□□□□□ -0.76
BRF1-215ENST00000549655 Q75L30 129 aa10.31□□□□□ -0.76
BRF1-215ENST00000549655 DMAC1Q96GE9 116 aa10.29□□□□□ -0.76
BRF1-215ENST00000549655 ACYP2P14621 99 aa10.27□□□□□ -0.77
BRF1-215ENST00000549655 Q1T7F1 81 aa10.25□□□□□ -0.77
BRF1-215ENST00000549655 XP32Q5T750 250 aa10.18□□□□□ -0.78
BRF1-215ENST00000549655 SPINK7P58062 85 aa10.17□□□□□ -0.78
BRF1-215ENST00000549655 ATP11AUNQ6ZP68 121 aa10.17□□□□□ -0.78
BRF1-215ENST00000549655 V9GYY9 64 aa10.16□□□□□ -0.78
BRF1-215ENST00000549655 RPL37P61927 97 aaKnown RBP10.15□□□□□ -0.78
BRF1-215ENST00000549655 CHKB-CPT1BH3BT56 60 aa10.13□□□□□ -0.79
BRF1-215ENST00000549655 PSPHP1O15172 72 aa10.11□□□□□ -0.79
BRF1-215ENST00000549655 A8MUN3 132 aa10.07□□□□□ -0.8
BRF1-215ENST00000549655 TPRXLQ17RH7 258 aa10.05□□□□□ -0.8
BRF1-215ENST00000549655 LINC01558Q9Y6Z2 57 aa10.03□□□□□ -0.8
BRF1-215ENST00000549655 PRR15LQ9BU68 103 aa10.02□□□□□ -0.81
BRF1-215ENST00000549655 KRTAP3-1Q9BYR8 98 aa10□□□□□ -0.81
BRF1-215ENST00000549655 J3QL48 77 aa9.99□□□□□ -0.81
BRF1-215ENST00000549655 ABCA13Q86UQ4 5058 aa9.99□□□□□ -0.81
BRF1-215ENST00000549655 Q5VV11 94 aa9.99□□□□□ -0.81
BRF1-215ENST00000549655 BIRC6Q9NR09 4857 aa9.98□□□□□ -0.81
BRF1-215ENST00000549655 COX6B2Q6YFQ2 88 aa9.94□□□□□ -0.82
BRF1-215ENST00000549655 HERC2O95714 4834 aa9.93□□□□□ -0.82
BRF1-215ENST00000549655 BRK1Q8WUW1 75 aa9.88□□□□□ -0.83
BRF1-215ENST00000549655 LRP2P98164 4655 aa9.84□□□□□ -0.83
BRF1-215ENST00000549655 LPAP08519 4548 aa9.83□□□□□ -0.84
BRF1-215ENST00000549655 SPTSSBQ8NFR3 76 aa9.82□□□□□ -0.84
BRF1-215ENST00000549655 PRO0628Q9UI54 55 aa9.81□□□□□ -0.84
BRF1-215ENST00000549655 A0A1B0GU69 56 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms