RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 LPAP08519 4548 aa9.86□□□□□ -0.83
HDAC7-227ENST00000548080 IGKV4-1P06312 121 aa9.85□□□□□ -0.83
HDAC7-227ENST00000548080 HIST1H4AP62805 103 aaKnown RBP9.85□□□□□ -0.83
HDAC7-227ENST00000548080 Q8N9L7 120 aa9.84□□□□□ -0.83
HDAC7-227ENST00000548080 C1orf195Q5TG92 126 aa9.83□□□□□ -0.84
HDAC7-227ENST00000548080 UBR4Q5T4S7 5183 aa9.81□□□□□ -0.84
HDAC7-227ENST00000548080 A8MWP4 228 aa9.81□□□□□ -0.84
HDAC7-227ENST00000548080 K7EQZ3 153 aa9.8□□□□□ -0.84
HDAC7-227ENST00000548080 A0A087WVE0 104 aa9.79□□□□□ -0.84
HDAC7-227ENST00000548080 NDUFB1O75438 58 aa9.79□□□□□ -0.84
HDAC7-227ENST00000548080 PRR15Q8IV56 129 aa9.78□□□□□ -0.84
HDAC7-227ENST00000548080 IGLV7-46A0A075B6I9 117 aa9.75□□□□□ -0.85
HDAC7-227ENST00000548080 SCGB1A1P11684 91 aa9.74□□□□□ -0.85
HDAC7-227ENST00000548080 A0A1B0GVX0 72 aa9.72□□□□□ -0.85
HDAC7-227ENST00000548080 FAM236AA0A1B0GUQ0 79 aa9.72□□□□□ -0.85
HDAC7-227ENST00000548080 FAM236BA0A1B0GV22 79 aa9.72□□□□□ -0.85
HDAC7-227ENST00000548080 IGHV6-1A0A0B4J1U7 121 aa9.71□□□□□ -0.86
HDAC7-227ENST00000548080 HCG22E2RYF7 251 aa9.68□□□□□ -0.86
HDAC7-227ENST00000548080 FP248Q71RG6 208 aaPredicted RBP9.67□□□□□ -0.86
HDAC7-227ENST00000548080 C8orf17Q9NRJ1 99 aa9.67□□□□□ -0.86
HDAC7-227ENST00000548080 MMP24-AS1A0A0U1RRL7 71 aa9.66□□□□□ -0.86
HDAC7-227ENST00000548080 C8orf87E5RJ46 101 aa9.65□□□□□ -0.87
HDAC7-227ENST00000548080 TPRXLQ17RH7 258 aa9.64□□□□□ -0.87
HDAC7-227ENST00000548080 WFDC13Q8IUB5 93 aa9.64□□□□□ -0.87
HDAC7-227ENST00000548080 CASC2Q6XLA1 102 aa9.63□□□□□ -0.87
HDAC7-227ENST00000548080 NOTCH2NLQ7Z3S9 236 aa9.62□□□□□ -0.87
HDAC7-227ENST00000548080 KRTAP13-3Q3SY46 172 aa9.61□□□□□ -0.87
HDAC7-227ENST00000548080 hDV103S1A0JD37 113 aa9.6□□□□□ -0.87
HDAC7-227ENST00000548080 ATOX1O00244 68 aa9.6□□□□□ -0.87
HDAC7-227ENST00000548080 LINC00313P59037 77 aa9.6□□□□□ -0.87
HDAC7-227ENST00000548080 RNF213Q63HN8 5207 aa9.6□□□□□ -0.87
HDAC7-227ENST00000548080 TMEM254Q8TBM7 123 aa9.57□□□□□ -0.88
HDAC7-227ENST00000548080 MRPL34Q9BQ48 92 aaKnown RBP9.54□□□□□ -0.88
HDAC7-227ENST00000548080 C9orf92A6NGG3 77 aa9.53□□□□□ -0.88
HDAC7-227ENST00000548080 SMIM20Q8N5G0 67 aa9.53□□□□□ -0.88
HDAC7-227ENST00000548080 ANAPC13Q9BS18 74 aa9.53□□□□□ -0.88
HDAC7-227ENST00000548080 OCR1Q9BZK8 76 aa9.51□□□□□ -0.89
HDAC7-227ENST00000548080 KRTAP16-1A8MUX0 517 aa9.5□□□□□ -0.89
HDAC7-227ENST00000548080 TRAV7A0A075B6U4 112 aa9.49□□□□□ -0.89
HDAC7-227ENST00000548080 SERP2Q8N6R1 65 aa9.48□□□□□ -0.89
HDAC7-227ENST00000548080 XP32Q5T750 250 aa9.47□□□□□ -0.89
HDAC7-227ENST00000548080 NDUFS5O43920 106 aa9.47□□□□□ -0.89
HDAC7-227ENST00000548080 MUC17Q685J3 4493 aa9.46□□□□□ -0.9
HDAC7-227ENST00000548080 Q8N9P0 234 aaPredicted RBP9.45□□□□□ -0.9
HDAC7-227ENST00000548080 TP53AIP1Q9HCN2 124 aa9.45□□□□□ -0.9
HDAC7-227ENST00000548080 UQCRQO14949 82 aa9.43□□□□□ -0.9
HDAC7-227ENST00000548080 PCP4P48539 62 aa9.43□□□□□ -0.9
HDAC7-227ENST00000548080 COX7CP15954 63 aa9.41□□□□□ -0.9
HDAC7-227ENST00000548080 MUC2Q02817 5179 aa9.39□□□□□ -0.91
HDAC7-227ENST00000548080 C20orf166-AS1Q96NR2 134 aa9.37□□□□□ -0.91
HDAC7-227ENST00000548080 A8MUU9 505 aa9.36□□□□□ -0.91
HDAC7-227ENST00000548080 C5orf47Q569G3 176 aa9.36□□□□□ -0.91
HDAC7-227ENST00000548080 TRAV22A0A0B4J277 110 aa9.33□□□□□ -0.92
HDAC7-227ENST00000548080 CCDC179H3BU77 68 aa9.33□□□□□ -0.92
HDAC7-227ENST00000548080 SEC61BP60468 96 aaKnown RBP9.33□□□□□ -0.92
HDAC7-227ENST00000548080 H0Y9P7 68 aa9.32□□□□□ -0.92
HDAC7-227ENST00000548080 KRTAP4-1Q9BYQ7 146 aa9.32□□□□□ -0.92
HDAC7-227ENST00000548080 MP68P56378 58 aa9.31□□□□□ -0.92
HDAC7-227ENST00000548080 Q5W150 140 aa9.31□□□□□ -0.92
HDAC7-227ENST00000548080 Q75L30 129 aa9.31□□□□□ -0.92
HDAC7-227ENST00000548080 PCOTHQ58A44 107 aa9.29□□□□□ -0.92
HDAC7-227ENST00000548080 C20orf197Q8N268 126 aa9.29□□□□□ -0.92
HDAC7-227ENST00000548080 H3BPC8 53 aa9.27□□□□□ -0.93
HDAC7-227ENST00000548080 ZCCHC13Q8WW36 166 aaKnown RBP9.27□□□□□ -0.93
HDAC7-227ENST00000548080 A0A0U1RQV1 116 aa9.26□□□□□ -0.93
HDAC7-227ENST00000548080 RPL37P61927 97 aaKnown RBP9.25□□□□□ -0.93
HDAC7-227ENST00000548080 LINC00208Q96KT6 92 aa9.25□□□□□ -0.93
HDAC7-227ENST00000548080 SNURFQ9Y675 71 aa9.24□□□□□ -0.93
HDAC7-227ENST00000548080 KLKP1Q107X0 134 aa9.23□□□□□ -0.93
HDAC7-227ENST00000548080 C1orf64Q8NEQ6 169 aa9.23□□□□□ -0.93
HDAC7-227ENST00000548080 ATP11AUNQ6ZP68 121 aa9.2□□□□□ -0.94
HDAC7-227ENST00000548080 LOC101927531A0A1B0GV80 90 aa9.18□□□□□ -0.94
HDAC7-227ENST00000548080 CYSTM1Q9H1C7 97 aa9.15□□□□□ -0.94
HDAC7-227ENST00000548080 IGKV2-30P06310 120 aa9.15□□□□□ -0.95
HDAC7-227ENST00000548080 FAT4Q6V0I7 4981 aa9.13□□□□□ -0.95
HDAC7-227ENST00000548080 NDUFC1O43677 76 aa9.13□□□□□ -0.95
HDAC7-227ENST00000548080 CYP4F30PQ9H0H9 118 aa9.12□□□□□ -0.95
HDAC7-227ENST00000548080 IGKV2D-30A0A075B6S6 120 aa9.11□□□□□ -0.95
HDAC7-227ENST00000548080 H7BZZ5 65 aa9.08□□□□□ -0.96
HDAC7-227ENST00000548080 C7orf65Q6ZTY9 151 aa9.08□□□□□ -0.96
HDAC7-227ENST00000548080 SPINK7P58062 85 aa9.04□□□□□ -0.96
HDAC7-227ENST00000548080 TMEM258P61165 79 aa8.99□□□□□ -0.97
HDAC7-227ENST00000548080 KRTAP19-2Q3LHN2 52 aa8.99□□□□□ -0.97
HDAC7-227ENST00000548080 HRES1P13985 223 aa8.97□□□□□ -0.97
HDAC7-227ENST00000548080 LCE2AQ5TA79 106 aaPredicted RBP8.97□□□□□ -0.97
HDAC7-227ENST00000548080 LCE2CQ5TA81 110 aa8.96□□□□□ -0.97
HDAC7-227ENST00000548080 SPANXA2-OT1Q8N9U9 137 aa8.96□□□□□ -0.97
HDAC7-227ENST00000548080 FAM236DA0A1B0GTK5 79 aa8.91□□□□□ -0.98
HDAC7-227ENST00000548080 FAM236CP0DP71 79 aa8.91□□□□□ -0.98
HDAC7-227ENST00000548080 ATP5EP56381 51 aaPredicted RBP8.9□□□□□ -0.98
HDAC7-227ENST00000548080 COX6B2Q6YFQ2 88 aa8.88□□□□□ -0.99
HDAC7-227ENST00000548080 C4orf26Q17RF5 130 aa8.87□□□□□ -0.99
HDAC7-227ENST00000548080 MT1HP80294 61 aa8.83□□□□□ -1
HDAC7-227ENST00000548080 DMAC1Q96GE9 116 aa8.81□□□□□ -1
HDAC7-227ENST00000548080 MPLKIPQ8TAP9 179 aa8.77□□□□□ -1
HDAC7-227ENST00000548080 FLGP20930 4061 aaPredicted RBP8.77□□□□□ -1
HDAC7-227ENST00000548080 A8MUN3 132 aa8.77□□□□□ -1.01
HDAC7-227ENST00000548080 ACYP2P14621 99 aa8.77□□□□□ -1.01
HDAC7-227ENST00000548080 KRTAP3-1Q9BYR8 98 aa8.76□□□□□ -1.01
HDAC7-227ENST00000548080 RBM12B-AS1Q9P1G2 102 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 199 ms