RNA–Protein interactions for RNA: ENST00000546361.6

CHERP-203, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHERP, Length 4,173 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-203ENST00000546361 Q6ZRN7 208 aaPredicted RBP7.09□□□□□ -1.28
CHERP-203ENST00000546361 ANK3Q12955 4377 aaKnown RBP7.08□□□□□ -1.28
CHERP-203ENST00000546361 LINC01554Q52M75 96 aa7.08□□□□□ -1.28
CHERP-203ENST00000546361 SPANXA2-OT1Q8N9U9 137 aa7.08□□□□□ -1.28
CHERP-203ENST00000546361 CYP4F30PQ9H0H9 118 aa7.08□□□□□ -1.28
CHERP-203ENST00000546361 VWFP04275 2813 aa7.08□□□□□ -1.28
CHERP-203ENST00000546361 KRTAP4-16G5E9R7 235 aaPredicted RBP7.07□□□□□ -1.28
CHERP-203ENST00000546361 Q5XG85 94 aa7.07□□□□□ -1.28
CHERP-203ENST00000546361 ZCCHC13Q8WW36 166 aaKnown RBP7.06□□□□□ -1.28
CHERP-203ENST00000546361 M0R2T5 61 aa7.05□□□□□ -1.28
CHERP-203ENST00000546361 CYSTM1Q9H1C7 97 aa7.05□□□□□ -1.28
CHERP-203ENST00000546361 HRES1P13985 223 aa7.05□□□□□ -1.28
CHERP-203ENST00000546361 Q8N9P0 234 aaPredicted RBP7.03□□□□□ -1.28
CHERP-203ENST00000546361 A0A087X002 238 aa7.02□□□□□ -1.29
CHERP-203ENST00000546361 MIR22HGQ0VDD5 57 aa7.02□□□□□ -1.29
CHERP-203ENST00000546361 FBN1P35555 2871 aaKnown RBP7.01□□□□□ -1.29
CHERP-203ENST00000546361 SPINK7P58062 85 aa7.01□□□□□ -1.29
CHERP-203ENST00000546361 LINC00483Q53H64 154 aa7.01□□□□□ -1.29
CHERP-203ENST00000546361 SEC61BP60468 96 aaKnown RBP7□□□□□ -1.29
CHERP-203ENST00000546361 KTN1-AS1Q86SY8 53 aa6.99□□□□□ -1.29
CHERP-203ENST00000546361 A0A0D9SG42 100 aa6.99□□□□□ -1.29
CHERP-203ENST00000546361 KRTAP11-1Q8IUC1 163 aa6.98□□□□□ -1.29
CHERP-203ENST00000546361 SPINT4Q6UDR6 99 aa6.97□□□□□ -1.29
CHERP-203ENST00000546361 Q5W150 140 aa6.96□□□□□ -1.3
CHERP-203ENST00000546361 FP248Q71RG6 208 aaPredicted RBP6.96□□□□□ -1.3
CHERP-203ENST00000546361 TGP01266 2768 aa6.95□□□□□ -1.3
CHERP-203ENST00000546361 SRRM2Q9UQ35 2752 aaKnown RBP6.95□□□□□ -1.3
CHERP-203ENST00000546361 Q1T7F1 81 aa6.95□□□□□ -1.3
CHERP-203ENST00000546361 OXTP01178 125 aa6.94□□□□□ -1.3
CHERP-203ENST00000546361 CSAG1Q6PB30 78 aa6.94□□□□□ -1.3
CHERP-203ENST00000546361 AKAP9Q99996 3911 aa6.94□□□□□ -1.3
CHERP-203ENST00000546361 KRTAP7-1Q8IUC3 87 aa6.93□□□□□ -1.3
CHERP-203ENST00000546361 LCA10Q71F78 164 aa6.89□□□□□ -1.31
CHERP-203ENST00000546361 CRIPTQ9P021 101 aa6.89□□□□□ -1.31
CHERP-203ENST00000546361 TRRAPQ9Y4A5 3859 aa6.87□□□□□ -1.31
CHERP-203ENST00000546361 A0A1B0GU33 70 aa6.86□□□□□ -1.31
CHERP-203ENST00000546361 CDC42SE1Q9NRR8 79 aa6.85□□□□□ -1.31
CHERP-203ENST00000546361 CAMK2N1Q7Z7J9 78 aa6.84□□□□□ -1.31
CHERP-203ENST00000546361 S4R3F8 94 aa6.84□□□□□ -1.31
CHERP-203ENST00000546361 NOTCH2NLQ7Z3S9 236 aa6.81□□□□□ -1.32
CHERP-203ENST00000546361 KRTAP13-2Q52LG2 175 aa6.81□□□□□ -1.32
CHERP-203ENST00000546361 KRTAP13-1Q8IUC0 172 aa6.8□□□□□ -1.32
CHERP-203ENST00000546361 KRTAP29-1A8MX34 341 aaPredicted RBP6.79□□□□□ -1.32
CHERP-203ENST00000546361 R4GN34 69 aa6.77□□□□□ -1.33
CHERP-203ENST00000546361 ASB16-AS1Q495Z4 193 aa6.76□□□□□ -1.33
CHERP-203ENST00000546361 FBN3Q75N90 2809 aa6.76□□□□□ -1.33
CHERP-203ENST00000546361 Q75L30 129 aa6.75□□□□□ -1.33
CHERP-203ENST00000546361 RPS29P62273 56 aaKnown RBP6.75□□□□□ -1.33
CHERP-203ENST00000546361 LINC01558Q9Y6Z2 57 aa6.73□□□□□ -1.33
CHERP-203ENST00000546361 Q5VV11 94 aa6.7□□□□□ -1.34
CHERP-203ENST00000546361 DMAC1Q96GE9 116 aa6.69□□□□□ -1.34
CHERP-203ENST00000546361 PRAC1Q96KF2 57 aa6.62□□□□□ -1.35
CHERP-203ENST00000546361 M0QZ58 72 aa6.61□□□□□ -1.35
CHERP-203ENST00000546361 RPL37P61927 97 aaKnown RBP6.58□□□□□ -1.36
CHERP-203ENST00000546361 H1FX-AS1Q4G0G2 97 aa6.57□□□□□ -1.36
CHERP-203ENST00000546361 KRTAP1-4P0C5Y4 121 aa6.57□□□□□ -1.36
CHERP-203ENST00000546361 ADM2Q7Z4H4 148 aa6.56□□□□□ -1.36
CHERP-203ENST00000546361 CMYA5Q8N3K9 4069 aa6.53□□□□□ -1.36
CHERP-203ENST00000546361 A0A0A0MQY5 61 aa6.52□□□□□ -1.37
CHERP-203ENST00000546361 C20orf166-AS1Q96NR2 134 aa6.49□□□□□ -1.37
CHERP-203ENST00000546361 A8MUU9 505 aa6.48□□□□□ -1.37
CHERP-203ENST00000546361 SPATA8Q6RVD6 105 aa6.48□□□□□ -1.37
CHERP-203ENST00000546361 PLAC4Q8WY50 150 aa6.45□□□□□ -1.38
CHERP-203ENST00000546361 COL7A1Q02388 2944 aa6.44□□□□□ -1.38
CHERP-203ENST00000546361 A8MU10 97 aa6.43□□□□□ -1.38
CHERP-203ENST00000546361 DNAH3Q8TD57 4116 aa6.43□□□□□ -1.38
CHERP-203ENST00000546361 LUZP6Q538Z0 58 aa6.43□□□□□ -1.38
CHERP-203ENST00000546361 HUWE1Q7Z6Z7 4374 aaKnown RBP6.42□□□□□ -1.38
CHERP-203ENST00000546361 A6NN06 94 aa6.42□□□□□ -1.38
CHERP-203ENST00000546361 XP32Q5T750 250 aa6.4□□□□□ -1.38
CHERP-203ENST00000546361 MEGF8Q7Z7M0 2845 aa6.36□□□□□ -1.39
CHERP-203ENST00000546361 A0A1B0GVY2 172 aa6.36□□□□□ -1.39
CHERP-203ENST00000546361 ROMO1P60602 79 aa6.35□□□□□ -1.39
CHERP-203ENST00000546361 TPRXLQ17RH7 258 aa6.33□□□□□ -1.4
CHERP-203ENST00000546361 DNHD1Q96M86 4753 aa6.33□□□□□ -1.4
CHERP-203ENST00000546361 ANK2Q01484 3957 aa6.32□□□□□ -1.4
CHERP-203ENST00000546361 DNAH9Q9NYC9 4486 aa6.31□□□□□ -1.4
CHERP-203ENST00000546361 KRTAP10-8P60410 259 aa6.28□□□□□ -1.4
CHERP-203ENST00000546361 KRTAP13-3Q3SY46 172 aa6.25□□□□□ -1.41
CHERP-203ENST00000546361 KRTAP16-1A8MUX0 517 aa6.23□□□□□ -1.41
CHERP-203ENST00000546361 DNAH1Q9P2D7 4330 aa6.19□□□□□ -1.42
CHERP-203ENST00000546361 PLECQ15149 4684 aaKnown RBP6.16□□□□□ -1.42
CHERP-203ENST00000546361 PRKDCP78527 4128 aaKnown RBP6.14□□□□□ -1.43
CHERP-203ENST00000546361 CSMD3Q7Z407 3707 aa6.12□□□□□ -1.43
CHERP-203ENST00000546361 DYNC2H1Q8NCM8 4307 aaKnown RBP6.11□□□□□ -1.43
CHERP-203ENST00000546361 KRTAP25-1Q3LHN0 102 aa6.1□□□□□ -1.43
CHERP-203ENST00000546361 DNAH10Q8IVF4 4471 aa6.1□□□□□ -1.43
CHERP-203ENST00000546361 KRTAP10-10P60014 251 aa6.09□□□□□ -1.43
CHERP-203ENST00000546361 STARD9Q9P2P6 4700 aa6.08□□□□□ -1.44
CHERP-203ENST00000546361 TNP1P09430 55 aa6.07□□□□□ -1.44
CHERP-203ENST00000546361 NDUFAF8A1L188 74 aa6.04□□□□□ -1.44
CHERP-203ENST00000546361 VPS13DQ5THJ4 4388 aa6.04□□□□□ -1.44
CHERP-203ENST00000546361 LYSTQ99698 3801 aa6□□□□□ -1.45
CHERP-203ENST00000546361 P0C880 135 aa5.98□□□□□ -1.45
CHERP-203ENST00000546361 DNAH7Q8WXX0 4024 aa5.98□□□□□ -1.45
CHERP-203ENST00000546361 KMT2AQ03164 3969 aa5.92□□□□□ -1.46
CHERP-203ENST00000546361 H0YAA0 97 aa5.91□□□□□ -1.46
CHERP-203ENST00000546361 DNAH17Q9UFH2 4485 aa5.89□□□□□ -1.47
CHERP-203ENST00000546361 ALMS1Q8TCU4 4167 aa5.87□□□□□ -1.47
CHERP-203ENST00000546361 DNAH11Q96DT5 4516 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms