RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 ABCA13Q86UQ4 5058 aa7.81□□□□□ -1.16
SCARB1-209ENST00000545305 PRR15Q8IV56 129 aa7.8□□□□□ -1.16
SCARB1-209ENST00000545305 A0A1B0GVX0 72 aa7.79□□□□□ -1.16
SCARB1-209ENST00000545305 A0A087WVE0 104 aa7.77□□□□□ -1.17
SCARB1-209ENST00000545305 IGHV6-1A0A0B4J1U7 121 aa7.77□□□□□ -1.17
SCARB1-209ENST00000545305 RETNLBQ9BQ08 111 aa7.77□□□□□ -1.17
SCARB1-209ENST00000545305 C8orf87E5RJ46 101 aa7.74□□□□□ -1.17
SCARB1-209ENST00000545305 FP248Q71RG6 208 aaPredicted RBP7.74□□□□□ -1.17
SCARB1-209ENST00000545305 DMBT1Q9UGM3 2413 aaPredicted RBP7.74□□□□□ -1.17
SCARB1-209ENST00000545305 HCG22E2RYF7 251 aa7.73□□□□□ -1.17
SCARB1-209ENST00000545305 C8orf17Q9NRJ1 99 aa7.73□□□□□ -1.17
SCARB1-209ENST00000545305 FAM236AA0A1B0GUQ0 79 aa7.71□□□□□ -1.18
SCARB1-209ENST00000545305 FAM236BA0A1B0GV22 79 aa7.71□□□□□ -1.18
SCARB1-209ENST00000545305 MMP24-AS1A0A0U1RRL7 71 aa7.7□□□□□ -1.18
SCARB1-209ENST00000545305 CASC2Q6XLA1 102 aa7.7□□□□□ -1.18
SCARB1-209ENST00000545305 WFDC13Q8IUB5 93 aa7.7□□□□□ -1.18
SCARB1-209ENST00000545305 LINC00313P59037 77 aa7.69□□□□□ -1.18
SCARB1-209ENST00000545305 hDV103S1A0JD37 113 aa7.68□□□□□ -1.18
SCARB1-209ENST00000545305 SCGB1A1P11684 91 aa7.68□□□□□ -1.18
SCARB1-209ENST00000545305 IGLV7-46A0A075B6I9 117 aa7.67□□□□□ -1.18
SCARB1-209ENST00000545305 PRR4Q16378 134 aa7.67□□□□□ -1.18
SCARB1-209ENST00000545305 NOTCH2NLQ7Z3S9 236 aa7.66□□□□□ -1.18
SCARB1-209ENST00000545305 TMEM254Q8TBM7 123 aa7.66□□□□□ -1.18
SCARB1-209ENST00000545305 ATOX1O00244 68 aa7.63□□□□□ -1.19
SCARB1-209ENST00000545305 MRPL34Q9BQ48 92 aaKnown RBP7.63□□□□□ -1.19
SCARB1-209ENST00000545305 C9orf92A6NGG3 77 aa7.62□□□□□ -1.19
SCARB1-209ENST00000545305 NDUFS5O43920 106 aa7.6□□□□□ -1.19
SCARB1-209ENST00000545305 SMIM20Q8N5G0 67 aa7.59□□□□□ -1.19
SCARB1-209ENST00000545305 KRTAP16-1A8MUX0 517 aa7.58□□□□□ -1.2
SCARB1-209ENST00000545305 KRTAP13-3Q3SY46 172 aa7.56□□□□□ -1.2
SCARB1-209ENST00000545305 ANAPC13Q9BS18 74 aa7.55□□□□□ -1.2
SCARB1-209ENST00000545305 TPRXLQ17RH7 258 aa7.54□□□□□ -1.2
SCARB1-209ENST00000545305 Q8N9P0 234 aaPredicted RBP7.54□□□□□ -1.2
SCARB1-209ENST00000545305 TP53AIP1Q9HCN2 124 aa7.54□□□□□ -1.2
SCARB1-209ENST00000545305 TRAV7A0A075B6U4 112 aa7.53□□□□□ -1.2
SCARB1-209ENST00000545305 OCR1Q9BZK8 76 aa7.53□□□□□ -1.2
SCARB1-209ENST00000545305 UQCRQO14949 82 aa7.52□□□□□ -1.21
SCARB1-209ENST00000545305 SERP2Q8N6R1 65 aa7.51□□□□□ -1.21
SCARB1-209ENST00000545305 C20orf166-AS1Q96NR2 134 aa7.51□□□□□ -1.21
SCARB1-209ENST00000545305 A8MUU9 505 aa7.49□□□□□ -1.21
SCARB1-209ENST00000545305 XP32Q5T750 250 aa7.48□□□□□ -1.21
SCARB1-209ENST00000545305 Q75L30 129 aa7.48□□□□□ -1.21
SCARB1-209ENST00000545305 HERC1Q15751 4861 aa7.47□□□□□ -1.21
SCARB1-209ENST00000545305 TRAV22A0A0B4J277 110 aa7.46□□□□□ -1.22
SCARB1-209ENST00000545305 COX7CP15954 63 aa7.45□□□□□ -1.22
SCARB1-209ENST00000545305 C5orf47Q569G3 176 aa7.45□□□□□ -1.22
SCARB1-209ENST00000545305 H0Y9P7 68 aa7.44□□□□□ -1.22
SCARB1-209ENST00000545305 MP68P56378 58 aa7.44□□□□□ -1.22
SCARB1-209ENST00000545305 RPL37P61927 97 aaKnown RBP7.44□□□□□ -1.22
SCARB1-209ENST00000545305 ZCCHC13Q8WW36 166 aaKnown RBP7.43□□□□□ -1.22
SCARB1-209ENST00000545305 ATP11AUNQ6ZP68 121 aa7.41□□□□□ -1.22
SCARB1-209ENST00000545305 H3BPC8 53 aa7.39□□□□□ -1.23
SCARB1-209ENST00000545305 Q5W150 140 aa7.39□□□□□ -1.23
SCARB1-209ENST00000545305 PCP4P48539 62 aa7.38□□□□□ -1.23
SCARB1-209ENST00000545305 C20orf197Q8N268 126 aa7.37□□□□□ -1.23
SCARB1-209ENST00000545305 LINC00208Q96KT6 92 aa7.37□□□□□ -1.23
SCARB1-209ENST00000545305 C1orf64Q8NEQ6 169 aa7.35□□□□□ -1.23
SCARB1-209ENST00000545305 A0A0U1RQV1 116 aa7.34□□□□□ -1.23
SCARB1-209ENST00000545305 LOC101927531A0A1B0GV80 90 aa7.34□□□□□ -1.23
SCARB1-209ENST00000545305 CCDC179H3BU77 68 aa7.33□□□□□ -1.24
SCARB1-209ENST00000545305 SEC61BP60468 96 aaKnown RBP7.32□□□□□ -1.24
SCARB1-209ENST00000545305 SNURFQ9Y675 71 aa7.32□□□□□ -1.24
SCARB1-209ENST00000545305 PCOTHQ58A44 107 aa7.31□□□□□ -1.24
SCARB1-209ENST00000545305 IGKV2D-30A0A075B6S6 120 aa7.3□□□□□ -1.24
SCARB1-209ENST00000545305 IGKV2-30P06310 120 aa7.3□□□□□ -1.24
SCARB1-209ENST00000545305 KLKP1Q107X0 134 aa7.3□□□□□ -1.24
SCARB1-209ENST00000545305 C7orf65Q6ZTY9 151 aa7.3□□□□□ -1.24
SCARB1-209ENST00000545305 HMCN2Q8NDA2 5059 aa7.3□□□□□ -1.24
SCARB1-209ENST00000545305 LPAP08519 4548 aa7.29□□□□□ -1.24
SCARB1-209ENST00000545305 CYP4F30PQ9H0H9 118 aa7.26□□□□□ -1.25
SCARB1-209ENST00000545305 NDUFC1O43677 76 aa7.25□□□□□ -1.25
SCARB1-209ENST00000545305 SPINK7P58062 85 aa7.24□□□□□ -1.25
SCARB1-209ENST00000545305 LRP2P98164 4655 aa7.22□□□□□ -1.25
SCARB1-209ENST00000545305 CYSTM1Q9H1C7 97 aa7.2□□□□□ -1.26
SCARB1-209ENST00000545305 H7BZZ5 65 aa7.17□□□□□ -1.26
SCARB1-209ENST00000545305 MUC17Q685J3 4493 aa7.16□□□□□ -1.26
SCARB1-209ENST00000545305 HRES1P13985 223 aa7.15□□□□□ -1.26
SCARB1-209ENST00000545305 TMEM258P61165 79 aa7.12□□□□□ -1.27
SCARB1-209ENST00000545305 SPANXA2-OT1Q8N9U9 137 aa7.12□□□□□ -1.27
SCARB1-209ENST00000545305 ATP5EP56381 51 aaPredicted RBP7.09□□□□□ -1.27
SCARB1-209ENST00000545305 C4orf26Q17RF5 130 aa7.09□□□□□ -1.27
SCARB1-209ENST00000545305 FAM236DA0A1B0GTK5 79 aa7.08□□□□□ -1.28
SCARB1-209ENST00000545305 FAM236CP0DP71 79 aa7.08□□□□□ -1.28
SCARB1-209ENST00000545305 RBM12B-AS1Q9P1G2 102 aa7.07□□□□□ -1.28
SCARB1-209ENST00000545305 KRTAP4-1Q9BYQ7 146 aa7.06□□□□□ -1.28
SCARB1-209ENST00000545305 UBR4Q5T4S7 5183 aa7.05□□□□□ -1.28
SCARB1-209ENST00000545305 COX6B2Q6YFQ2 88 aa7.04□□□□□ -1.28
SCARB1-209ENST00000545305 A8MUN3 132 aa7.02□□□□□ -1.29
SCARB1-209ENST00000545305 DMAC1Q96GE9 116 aa7.02□□□□□ -1.29
SCARB1-209ENST00000545305 MPLKIPQ8TAP9 179 aa7.01□□□□□ -1.29
SCARB1-209ENST00000545305 ACYP2P14621 99 aa6.98□□□□□ -1.29
SCARB1-209ENST00000545305 KRTAP3-1Q9BYR8 98 aa6.94□□□□□ -1.3
SCARB1-209ENST00000545305 H1FX-AS1Q4G0G2 97 aa6.92□□□□□ -1.3
SCARB1-209ENST00000545305 RNF213Q63HN8 5207 aa6.91□□□□□ -1.3
SCARB1-209ENST00000545305 CHKB-CPT1BH3BT56 60 aa6.9□□□□□ -1.3
SCARB1-209ENST00000545305 COA5Q86WW8 74 aa6.9□□□□□ -1.3
SCARB1-209ENST00000545305 SERP1Q9Y6X1 66 aa6.89□□□□□ -1.31
SCARB1-209ENST00000545305 S4R3F8 94 aa6.86□□□□□ -1.31
SCARB1-209ENST00000545305 KRTAP19-2Q3LHN2 52 aa6.83□□□□□ -1.32
SCARB1-209ENST00000545305 SPTSSBQ8NFR3 76 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms