RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 CXCL6P80162 114 aa5.42□□□□□ -1.54
YBX3-215ENST00000544504 LCE2AQ5TA79 106 aaPredicted RBP5.42□□□□□ -1.54
YBX3-215ENST00000544504 NDUFB1O75438 58 aa5.41□□□□□ -1.54
YBX3-215ENST00000544504 IGKV4-1P06312 121 aa5.41□□□□□ -1.54
YBX3-215ENST00000544504 C1orf195Q5TG92 126 aa5.41□□□□□ -1.54
YBX3-215ENST00000544504 FP248Q71RG6 208 aaPredicted RBP5.4□□□□□ -1.54
YBX3-215ENST00000544504 CDIP1Q9H305 208 aa5.4□□□□□ -1.54
YBX3-215ENST00000544504 Q96NJ1 140 aa5.39□□□□□ -1.55
YBX3-215ENST00000544504 A8MWP4 228 aa5.38□□□□□ -1.55
YBX3-215ENST00000544504 DEFB116Q30KQ4 102 aa5.37□□□□□ -1.55
YBX3-215ENST00000544504 IGKV3D-7A0A0C4DH55 119 aa5.36□□□□□ -1.55
YBX3-215ENST00000544504 IMUPQ9GZP8 106 aa5.36□□□□□ -1.55
YBX3-215ENST00000544504 A0A1B0GVX0 72 aa5.35□□□□□ -1.55
YBX3-215ENST00000544504 DSCR10P59022 87 aa5.35□□□□□ -1.55
YBX3-215ENST00000544504 C8orf87E5RJ46 101 aa5.34□□□□□ -1.55
YBX3-215ENST00000544504 PRR15Q8IV56 129 aa5.34□□□□□ -1.55
YBX3-215ENST00000544504 IGHV6-1A0A0B4J1U7 121 aa5.32□□□□□ -1.56
YBX3-215ENST00000544504 K7EQZ3 153 aa5.32□□□□□ -1.56
YBX3-215ENST00000544504 HIST1H4AP62805 103 aaKnown RBP5.32□□□□□ -1.56
YBX3-215ENST00000544504 RETNLBQ9BQ08 111 aa5.32□□□□□ -1.56
YBX3-215ENST00000544504 KRTAP3-3Q9BYR6 98 aa5.32□□□□□ -1.56
YBX3-215ENST00000544504 KRTAP3-2Q9BYR7 98 aa5.32□□□□□ -1.56
YBX3-215ENST00000544504 IGLV7-46A0A075B6I9 117 aa5.31□□□□□ -1.56
YBX3-215ENST00000544504 PRR4Q16378 134 aa5.31□□□□□ -1.56
YBX3-215ENST00000544504 MT-ATP8P03928 68 aa5.3□□□□□ -1.56
YBX3-215ENST00000544504 LINC00313P59037 77 aa5.3□□□□□ -1.56
YBX3-215ENST00000544504 CRCT1Q9UGL9 99 aa5.3□□□□□ -1.56
YBX3-215ENST00000544504 Q8N9L7 120 aa5.29□□□□□ -1.56
YBX3-215ENST00000544504 C8orf17Q9NRJ1 99 aa5.29□□□□□ -1.56
YBX3-215ENST00000544504 HCG22E2RYF7 251 aa5.28□□□□□ -1.56
YBX3-215ENST00000544504 hDV103S1A0JD37 113 aa5.26□□□□□ -1.57
YBX3-215ENST00000544504 TPRXLQ17RH7 258 aa5.26□□□□□ -1.57
YBX3-215ENST00000544504 CASC2Q6XLA1 102 aa5.26□□□□□ -1.57
YBX3-215ENST00000544504 TMEM254Q8TBM7 123 aa5.26□□□□□ -1.57
YBX3-215ENST00000544504 MUC17Q685J3 4493 aa5.26□□□□□ -1.57
YBX3-215ENST00000544504 MMP24-AS1A0A0U1RRL7 71 aa5.25□□□□□ -1.57
YBX3-215ENST00000544504 KRTAP13-3Q3SY46 172 aa5.24□□□□□ -1.57
YBX3-215ENST00000544504 A0A087WVE0 104 aa5.23□□□□□ -1.57
YBX3-215ENST00000544504 WFDC13Q8IUB5 93 aa5.23□□□□□ -1.57
YBX3-215ENST00000544504 MRPL34Q9BQ48 92 aaKnown RBP5.23□□□□□ -1.57
YBX3-215ENST00000544504 C9orf92A6NGG3 77 aa5.22□□□□□ -1.57
YBX3-215ENST00000544504 SCGB1A1P11684 91 aa5.22□□□□□ -1.57
YBX3-215ENST00000544504 NOTCH2NLQ7Z3S9 236 aa5.21□□□□□ -1.58
YBX3-215ENST00000544504 FAM236AA0A1B0GUQ0 79 aa5.2□□□□□ -1.58
YBX3-215ENST00000544504 FAM236BA0A1B0GV22 79 aa5.2□□□□□ -1.58
YBX3-215ENST00000544504 KRTAP16-1A8MUX0 517 aa5.2□□□□□ -1.58
YBX3-215ENST00000544504 SMIM20Q8N5G0 67 aa5.2□□□□□ -1.58
YBX3-215ENST00000544504 Q8N9P0 234 aaPredicted RBP5.2□□□□□ -1.58
YBX3-215ENST00000544504 TP53AIP1Q9HCN2 124 aa5.2□□□□□ -1.58
YBX3-215ENST00000544504 NDUFS5O43920 106 aa5.19□□□□□ -1.58
YBX3-215ENST00000544504 C20orf166-AS1Q96NR2 134 aa5.19□□□□□ -1.58
YBX3-215ENST00000544504 ATOX1O00244 68 aa5.18□□□□□ -1.58
YBX3-215ENST00000544504 Q75L30 129 aa5.18□□□□□ -1.58
YBX3-215ENST00000544504 A8MUU9 505 aa5.17□□□□□ -1.58
YBX3-215ENST00000544504 XP32Q5T750 250 aa5.16□□□□□ -1.58
YBX3-215ENST00000544504 UQCRQO14949 82 aa5.15□□□□□ -1.59
YBX3-215ENST00000544504 RPL37P61927 97 aaKnown RBP5.14□□□□□ -1.59
YBX3-215ENST00000544504 ATP11AUNQ6ZP68 121 aa5.14□□□□□ -1.59
YBX3-215ENST00000544504 TRAV7A0A075B6U4 112 aa5.13□□□□□ -1.59
YBX3-215ENST00000544504 ZCCHC13Q8WW36 166 aaKnown RBP5.12□□□□□ -1.59
YBX3-215ENST00000544504 OCR1Q9BZK8 76 aa5.12□□□□□ -1.59
YBX3-215ENST00000544504 SEC61BP60468 96 aaKnown RBP5.11□□□□□ -1.59
YBX3-215ENST00000544504 C5orf47Q569G3 176 aa5.11□□□□□ -1.59
YBX3-215ENST00000544504 TRAV22A0A0B4J277 110 aa5.1□□□□□ -1.59
YBX3-215ENST00000544504 MP68P56378 58 aa5.09□□□□□ -1.59
YBX3-215ENST00000544504 SERP2Q8N6R1 65 aa5.09□□□□□ -1.59
YBX3-215ENST00000544504 H3BPC8 53 aa5.08□□□□□ -1.6
YBX3-215ENST00000544504 ANAPC13Q9BS18 74 aa5.08□□□□□ -1.6
YBX3-215ENST00000544504 H0Y9P7 68 aa5.06□□□□□ -1.6
YBX3-215ENST00000544504 LOC101927531A0A1B0GV80 90 aa5.04□□□□□ -1.6
YBX3-215ENST00000544504 COX7CP15954 63 aa5.04□□□□□ -1.6
YBX3-215ENST00000544504 PCOTHQ58A44 107 aa5.04□□□□□ -1.6
YBX3-215ENST00000544504 Q5W150 140 aa5.04□□□□□ -1.6
YBX3-215ENST00000544504 C7orf65Q6ZTY9 151 aa5.02□□□□□ -1.61
YBX3-215ENST00000544504 KRTAP9-7A8MTY7 169 aa5.01□□□□□ -1.61
YBX3-215ENST00000544504 C1orf64Q8NEQ6 169 aa5.01□□□□□ -1.61
YBX3-215ENST00000544504 LINC00208Q96KT6 92 aa5.01□□□□□ -1.61
YBX3-215ENST00000544504 IGKV2-30P06310 120 aa5□□□□□ -1.61
YBX3-215ENST00000544504 IGKV2D-30A0A075B6S6 120 aa4.99□□□□□ -1.61
YBX3-215ENST00000544504 SPINK7P58062 85 aa4.98□□□□□ -1.61
YBX3-215ENST00000544504 C20orf197Q8N268 126 aa4.98□□□□□ -1.61
YBX3-215ENST00000544504 CYP4F30PQ9H0H9 118 aa4.97□□□□□ -1.61
YBX3-215ENST00000544504 NDUFC1O43677 76 aa4.96□□□□□ -1.62
YBX3-215ENST00000544504 KLKP1Q107X0 134 aa4.96□□□□□ -1.62
YBX3-215ENST00000544504 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.94□□□□□ -1.62
YBX3-215ENST00000544504 KRTAP4-1Q9BYQ7 146 aa4.93□□□□□ -1.62
YBX3-215ENST00000544504 SNURFQ9Y675 71 aa4.93□□□□□ -1.62
YBX3-215ENST00000544504 USH2AO75445 5202 aa4.92□□□□□ -1.62
YBX3-215ENST00000544504 LCE2CQ5TA81 110 aa4.91□□□□□ -1.62
YBX3-215ENST00000544504 RBM12B-AS1Q9P1G2 102 aa4.91□□□□□ -1.62
YBX3-215ENST00000544504 SSPOA2VEC9 5147 aa4.9□□□□□ -1.62
YBX3-215ENST00000544504 CCDC179H3BU77 68 aa4.9□□□□□ -1.63
YBX3-215ENST00000544504 PCP4P48539 62 aa4.9□□□□□ -1.63
YBX3-215ENST00000544504 MT1HP80294 61 aa4.89□□□□□ -1.63
YBX3-215ENST00000544504 HRES1P13985 223 aa4.88□□□□□ -1.63
YBX3-215ENST00000544504 LORP23490 312 aaPredicted RBP4.88□□□□□ -1.63
YBX3-215ENST00000544504 SPANXA2-OT1Q8N9U9 137 aa4.87□□□□□ -1.63
YBX3-215ENST00000544504 A8MUN3 132 aa4.85□□□□□ -1.63
YBX3-215ENST00000544504 H7BZZ5 65 aa4.85□□□□□ -1.63
YBX3-215ENST00000544504 KRTAP10-6P60371 365 aaPredicted RBP4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms