RNA–Protein interactions for RNA: ENST00000543114.1

CACNA1C-230, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 4

Gene CACNA1C, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-230ENST00000543114 KRTAP9-3Q9BYQ3 159 aa9.69□□□□□ -0.86
CACNA1C-230ENST00000543114 KRTAP10-10P60014 251 aa9.67□□□□□ -0.86
CACNA1C-230ENST00000543114 A0A1B0GVX0 72 aa9.66□□□□□ -0.86
CACNA1C-230ENST00000543114 UBE2V1Q13404 147 aa9.66□□□□□ -0.86
CACNA1C-230ENST00000543114 KRTAP19-1Q8IUB9 90 aa9.66□□□□□ -0.86
CACNA1C-230ENST00000543114 COX6CP09669 75 aa9.65□□□□□ -0.86
CACNA1C-230ENST00000543114 VPS25Q9BRG1 176 aa9.65□□□□□ -0.86
CACNA1C-230ENST00000543114 C8orf87E5RJ46 101 aa9.64□□□□□ -0.87
CACNA1C-230ENST00000543114 PYY3Q5JQD4 70 aa9.6□□□□□ -0.87
CACNA1C-230ENST00000543114 ZCCHC13Q8WW36 166 aaKnown RBP9.6□□□□□ -0.87
CACNA1C-230ENST00000543114 RBM3P98179 157 aaKnown RBP9.57□□□□□ -0.88
CACNA1C-230ENST00000543114 SPINK7P58062 85 aa9.56□□□□□ -0.88
CACNA1C-230ENST00000543114 MTURNQ8N3F0 131 aa9.56□□□□□ -0.88
CACNA1C-230ENST00000543114 DSCR8Q96T75 97 aa9.56□□□□□ -0.88
CACNA1C-230ENST00000543114 MACF1Q9UPN3 7388 aaKnown RBP9.56□□□□□ -0.88
CACNA1C-230ENST00000543114 SYNE2Q8WXH0 6885 aaKnown RBP9.53□□□□□ -0.88
CACNA1C-230ENST00000543114 J3KT08 172 aa9.53□□□□□ -0.88
CACNA1C-230ENST00000543114 SCGB1C2P0DMR2 95 aa9.51□□□□□ -0.89
CACNA1C-230ENST00000543114 Q6ZQT0 140 aa9.5□□□□□ -0.89
CACNA1C-230ENST00000543114 Q8N9P0 234 aaPredicted RBP9.5□□□□□ -0.89
CACNA1C-230ENST00000543114 C9JAW5 83 aa9.49□□□□□ -0.89
CACNA1C-230ENST00000543114 UQCR10Q9UDW1 63 aa9.49□□□□□ -0.89
CACNA1C-230ENST00000543114 C21orf62-AS1Q17RA5 79 aa9.47□□□□□ -0.89
CACNA1C-230ENST00000543114 WFDC13Q8IUB5 93 aa9.47□□□□□ -0.89
CACNA1C-230ENST00000543114 BAALC-AS2P0C853 105 aa9.46□□□□□ -0.9
CACNA1C-230ENST00000543114 C8orf17Q9NRJ1 99 aa9.45□□□□□ -0.9
CACNA1C-230ENST00000543114 NDUFB1O75438 58 aa9.44□□□□□ -0.9
CACNA1C-230ENST00000543114 A8MWP4 228 aa9.42□□□□□ -0.9
CACNA1C-230ENST00000543114 KRTAP19-6Q3LI70 58 aa9.41□□□□□ -0.9
CACNA1C-230ENST00000543114 IGKV3D-7A0A0C4DH55 119 aa9.4□□□□□ -0.9
CACNA1C-230ENST00000543114 LYRM7Q5U5X0 104 aa9.4□□□□□ -0.9
CACNA1C-230ENST00000543114 LOC110117498A0A087WWA1 95 aa9.36□□□□□ -0.91
CACNA1C-230ENST00000543114 Q6ZVQ6 151 aa9.36□□□□□ -0.91
CACNA1C-230ENST00000543114 JMJD7-PLA2G4BH0Y9G9 81 aa9.35□□□□□ -0.91
CACNA1C-230ENST00000543114 NAA38Q9BRA0 125 aaKnown RBP9.35□□□□□ -0.91
CACNA1C-230ENST00000543114 LINC00846Q9NV44 126 aa9.34□□□□□ -0.91
CACNA1C-230ENST00000543114 A0A1B0GW54 56 aa9.33□□□□□ -0.92
CACNA1C-230ENST00000543114 ATXN8Q156A1 80 aa9.33□□□□□ -0.92
CACNA1C-230ENST00000543114 PRR15Q8IV56 129 aa9.31□□□□□ -0.92
CACNA1C-230ENST00000543114 C14orf132Q9NPU4 83 aa9.31□□□□□ -0.92
CACNA1C-230ENST00000543114 TMA7Q9Y2S6 64 aaKnown RBP9.3□□□□□ -0.92
CACNA1C-230ENST00000543114 MMP24-AS1A0A0U1RRL7 71 aa9.29□□□□□ -0.92
CACNA1C-230ENST00000543114 PDE6GP18545 87 aa9.29□□□□□ -0.92
CACNA1C-230ENST00000543114 TMEM254Q8TBM7 123 aa9.26□□□□□ -0.93
CACNA1C-230ENST00000543114 MRPL34Q9BQ48 92 aaKnown RBP9.26□□□□□ -0.93
CACNA1C-230ENST00000543114 M0R143 59 aa9.24□□□□□ -0.93
CACNA1C-230ENST00000543114 NREPQ16612 68 aa9.24□□□□□ -0.93
CACNA1C-230ENST00000543114 H1FX-AS1Q4G0G2 97 aa9.23□□□□□ -0.93
CACNA1C-230ENST00000543114 K7EQZ3 153 aa9.21□□□□□ -0.94
CACNA1C-230ENST00000543114 hDV103S1A0JD37 113 aa9.19□□□□□ -0.94
CACNA1C-230ENST00000543114 NDUFS5O43920 106 aa9.18□□□□□ -0.94
CACNA1C-230ENST00000543114 IGKV2D-30A0A075B6S6 120 aa9.15□□□□□ -0.94
CACNA1C-230ENST00000543114 IGKV2-30P06310 120 aa9.15□□□□□ -0.94
CACNA1C-230ENST00000543114 Q5W150 140 aa9.11□□□□□ -0.95
CACNA1C-230ENST00000543114 C7orf65Q6ZTY9 151 aa9.11□□□□□ -0.95
CACNA1C-230ENST00000543114 KRTAP6-3Q3LI67 103 aa9.1□□□□□ -0.95
CACNA1C-230ENST00000543114 BPY2O14599 106 aa9.06□□□□□ -0.96
CACNA1C-230ENST00000543114 H3BT86 120 aa9.04□□□□□ -0.96
CACNA1C-230ENST00000543114 Q8N9L7 120 aa9.03□□□□□ -0.96
CACNA1C-230ENST00000543114 BATFQ16520 125 aa9.02□□□□□ -0.97
CACNA1C-230ENST00000543114 C4orf26Q17RF5 130 aa9.02□□□□□ -0.97
CACNA1C-230ENST00000543114 HCG22E2RYF7 251 aa9□□□□□ -0.97
CACNA1C-230ENST00000543114 CASC2Q6XLA1 102 aa9□□□□□ -0.97
CACNA1C-230ENST00000543114 NEBP20929 6669 aa8.98□□□□□ -0.97
CACNA1C-230ENST00000543114 SMIM6P0DI80 62 aa8.98□□□□□ -0.97
CACNA1C-230ENST00000543114 C5orf47Q569G3 176 aa8.95□□□□□ -0.98
CACNA1C-230ENST00000543114 C9orf118A6NHY6 69 aa8.94□□□□□ -0.98
CACNA1C-230ENST00000543114 MUC12Q9UKN1 5478 aa8.94□□□□□ -0.98
CACNA1C-230ENST00000543114 A0A1W2PPM0 123 aa8.93□□□□□ -0.98
CACNA1C-230ENST00000543114 TSTD3H0UI37 97 aa8.92□□□□□ -0.98
CACNA1C-230ENST00000543114 FAM236AA0A1B0GUQ0 79 aa8.91□□□□□ -0.98
CACNA1C-230ENST00000543114 FAM236BA0A1B0GV22 79 aa8.91□□□□□ -0.98
CACNA1C-230ENST00000543114 TAX1BP3O14907 124 aa8.91□□□□□ -0.98
CACNA1C-230ENST00000543114 CXCL6P80162 114 aa8.91□□□□□ -0.98
CACNA1C-230ENST00000543114 MT1BP07438 61 aa8.9□□□□□ -0.98
CACNA1C-230ENST00000543114 KRTAP3-1Q9BYR8 98 aa8.89□□□□□ -0.99
CACNA1C-230ENST00000543114 A6NN06 94 aa8.87□□□□□ -0.99
CACNA1C-230ENST00000543114 S4R3F8 94 aa8.86□□□□□ -0.99
CACNA1C-230ENST00000543114 Q5VV11 94 aa8.83□□□□□ -1
CACNA1C-230ENST00000543114 KRTAP19-8Q3LI54 63 aa8.82□□□□□ -1
CACNA1C-230ENST00000543114 LCA10Q71F78 164 aa8.82□□□□□ -1
CACNA1C-230ENST00000543114 SPRR2GQ9BYE4 73 aa8.82□□□□□ -1
CACNA1C-230ENST00000543114 SMCPP49901 116 aaPredicted RBP8.81□□□□□ -1
CACNA1C-230ENST00000543114 CSAG1Q6PB30 78 aa8.79□□□□□ -1
CACNA1C-230ENST00000543114 C1orf64Q8NEQ6 169 aa8.79□□□□□ -1
CACNA1C-230ENST00000543114 SPCS1Q9Y6A9 102 aa8.78□□□□□ -1
CACNA1C-230ENST00000543114 UBL5Q9BZL1 73 aa8.76□□□□□ -1.01
CACNA1C-230ENST00000543114 KRTAP10-5P60370 271 aa8.73□□□□□ -1.01
CACNA1C-230ENST00000543114 KLKP1Q107X0 134 aa8.7□□□□□ -1.02
CACNA1C-230ENST00000543114 PRO0461Q9UI25 63 aa8.68□□□□□ -1.02
CACNA1C-230ENST00000543114 TP53AIP1Q9HCN2 124 aa8.65□□□□□ -1.02
CACNA1C-230ENST00000543114 MDN1Q9NU22 5596 aa8.65□□□□□ -1.03
CACNA1C-230ENST00000543114 KMT2DO14686 5537 aa8.64□□□□□ -1.03
CACNA1C-230ENST00000543114 LOC105371267A0A1B0GV96 52 aa8.6□□□□□ -1.03
CACNA1C-230ENST00000543114 KRTAP5-9P26371 169 aa8.6□□□□□ -1.03
CACNA1C-230ENST00000543114 A0A087WVE0 104 aa8.58□□□□□ -1.04
CACNA1C-230ENST00000543114 K7EP34 96 aa8.58□□□□□ -1.04
CACNA1C-230ENST00000543114 KRTAP20-1Q3LI63 56 aa8.57□□□□□ -1.04
CACNA1C-230ENST00000543114 CYP4F30PQ9H0H9 118 aa8.56□□□□□ -1.04
CACNA1C-230ENST00000543114 COL5A1-AS1Q5SY13 56 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms