RNA–Protein interactions for RNA: ENST00000543004.5

OTUB1-211, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,647 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-211ENST00000543004 A0A1B0GVX0 72 aa11.3□□□□□ -0.6
OTUB1-211ENST00000543004 IGKV3D-7A0A0C4DH55 119 aa11.29□□□□□ -0.6
OTUB1-211ENST00000543004 A8MWP4 228 aa11.28□□□□□ -0.6
OTUB1-211ENST00000543004 BPY2O14599 106 aa11.28□□□□□ -0.6
OTUB1-211ENST00000543004 LINC00313P59037 77 aa11.26□□□□□ -0.61
OTUB1-211ENST00000543004 FAM240AA0A1B0GVK7 77 aa11.25□□□□□ -0.61
OTUB1-211ENST00000543004 K7EQZ3 153 aa11.24□□□□□ -0.61
OTUB1-211ENST00000543004 NDUFB1O75438 58 aa11.24□□□□□ -0.61
OTUB1-211ENST00000543004 ACYP1P07311 99 aa11.24□□□□□ -0.61
OTUB1-211ENST00000543004 Q8N9L7 120 aa11.24□□□□□ -0.61
OTUB1-211ENST00000543004 MUC17Q685J3 4493 aa11.23□□□□□ -0.61
OTUB1-211ENST00000543004 KRTAP16-1A8MUX0 517 aa11.22□□□□□ -0.61
OTUB1-211ENST00000543004 PRR15Q8IV56 129 aa11.22□□□□□ -0.61
OTUB1-211ENST00000543004 RNF213Q63HN8 5207 aa11.19□□□□□ -0.62
OTUB1-211ENST00000543004 C8orf87E5RJ46 101 aa11.19□□□□□ -0.62
OTUB1-211ENST00000543004 C8orf17Q9NRJ1 99 aa11.18□□□□□ -0.62
OTUB1-211ENST00000543004 RPL37P61927 97 aaKnown RBP11.17□□□□□ -0.62
OTUB1-211ENST00000543004 C20orf166-AS1Q96NR2 134 aa11.14□□□□□ -0.63
OTUB1-211ENST00000543004 MUC2Q02817 5179 aa11.14□□□□□ -0.63
OTUB1-211ENST00000543004 MMP24-AS1A0A0U1RRL7 71 aa11.13□□□□□ -0.63
OTUB1-211ENST00000543004 J3QR89 54 aa11.13□□□□□ -0.63
OTUB1-211ENST00000543004 A8MUU9 505 aa11.12□□□□□ -0.63
OTUB1-211ENST00000543004 PCOTHQ58A44 107 aa11.12□□□□□ -0.63
OTUB1-211ENST00000543004 Q75L30 129 aa11.12□□□□□ -0.63
OTUB1-211ENST00000543004 SEC61BP60468 96 aaKnown RBP11.11□□□□□ -0.63
OTUB1-211ENST00000543004 CXCL6P80162 114 aa11.11□□□□□ -0.63
OTUB1-211ENST00000543004 WFDC13Q8IUB5 93 aa11.06□□□□□ -0.64
OTUB1-211ENST00000543004 KRTAP4-1Q9BYQ7 146 aa11.06□□□□□ -0.64
OTUB1-211ENST00000543004 LINC00643Q86TS7 51 aa11.05□□□□□ -0.64
OTUB1-211ENST00000543004 hDV103S1A0JD37 113 aa11.04□□□□□ -0.64
OTUB1-211ENST00000543004 K7ERU9 68 aa11.02□□□□□ -0.65
OTUB1-211ENST00000543004 Q8N9P0 234 aaPredicted RBP11.02□□□□□ -0.65
OTUB1-211ENST00000543004 TMEM254Q8TBM7 123 aa11.02□□□□□ -0.65
OTUB1-211ENST00000543004 MRPL34Q9BQ48 92 aaKnown RBP11.02□□□□□ -0.65
OTUB1-211ENST00000543004 ATP5EP2Q5VTU8 51 aa11.01□□□□□ -0.65
OTUB1-211ENST00000543004 ATP11AUNQ6ZP68 121 aa11.01□□□□□ -0.65
OTUB1-211ENST00000543004 CASC2Q6XLA1 102 aa11□□□□□ -0.65
OTUB1-211ENST00000543004 HCG22E2RYF7 251 aa10.98□□□□□ -0.65
OTUB1-211ENST00000543004 HIST1H4AP62805 103 aaKnown RBP10.95□□□□□ -0.66
OTUB1-211ENST00000543004 NDUFS5O43920 106 aa10.93□□□□□ -0.66
OTUB1-211ENST00000543004 A0A087WVE0 104 aa10.91□□□□□ -0.66
OTUB1-211ENST00000543004 ZCCHC13Q8WW36 166 aaKnown RBP10.89□□□□□ -0.67
OTUB1-211ENST00000543004 MT-ATP8P03928 68 aa10.83□□□□□ -0.68
OTUB1-211ENST00000543004 Q5W150 140 aa10.82□□□□□ -0.68
OTUB1-211ENST00000543004 FAT4Q6V0I7 4981 aa10.73□□□□□ -0.69
OTUB1-211ENST00000543004 SPINK7P58062 85 aa10.7□□□□□ -0.7
OTUB1-211ENST00000543004 TP53AIP1Q9HCN2 124 aa10.69□□□□□ -0.7
OTUB1-211ENST00000543004 KRTAP19-2Q3LHN2 52 aa10.68□□□□□ -0.7
OTUB1-211ENST00000543004 IMUPQ9GZP8 106 aa10.68□□□□□ -0.7
OTUB1-211ENST00000543004 HRES1P13985 223 aa10.64□□□□□ -0.71
OTUB1-211ENST00000543004 IGKV2D-30A0A075B6S6 120 aa10.63□□□□□ -0.71
OTUB1-211ENST00000543004 IGKV2-30P06310 120 aa10.63□□□□□ -0.71
OTUB1-211ENST00000543004 LCE2CQ5TA81 110 aa10.62□□□□□ -0.71
OTUB1-211ENST00000543004 OCR1Q9BZK8 76 aa10.59□□□□□ -0.71
OTUB1-211ENST00000543004 A0A0U1RQV1 116 aa10.58□□□□□ -0.72
OTUB1-211ENST00000543004 UQCRQO14949 82 aa10.57□□□□□ -0.72
OTUB1-211ENST00000543004 TRAV22A0A0B4J277 110 aa10.56□□□□□ -0.72
OTUB1-211ENST00000543004 FAM236AA0A1B0GUQ0 79 aa10.56□□□□□ -0.72
OTUB1-211ENST00000543004 FAM236BA0A1B0GV22 79 aa10.56□□□□□ -0.72
OTUB1-211ENST00000543004 SCGB1A1P11684 91 aa10.56□□□□□ -0.72
OTUB1-211ENST00000543004 C7orf65Q6ZTY9 151 aa10.56□□□□□ -0.72
OTUB1-211ENST00000543004 MPLKIPQ8TAP9 179 aa10.56□□□□□ -0.72
OTUB1-211ENST00000543004 COX6B2Q6YFQ2 88 aa10.53□□□□□ -0.72
OTUB1-211ENST00000543004 H0Y9P7 68 aa10.51□□□□□ -0.73
OTUB1-211ENST00000543004 RBM12B-AS1Q9P1G2 102 aa10.47□□□□□ -0.73
OTUB1-211ENST00000543004 FLGP20930 4061 aaPredicted RBP10.45□□□□□ -0.74
OTUB1-211ENST00000543004 FAM236DA0A1B0GTK5 79 aa10.44□□□□□ -0.74
OTUB1-211ENST00000543004 FAM236CP0DP71 79 aa10.44□□□□□ -0.74
OTUB1-211ENST00000543004 LCE2AQ5TA79 106 aaPredicted RBP10.44□□□□□ -0.74
OTUB1-211ENST00000543004 CYP4F30PQ9H0H9 118 aa10.44□□□□□ -0.74
OTUB1-211ENST00000543004 ATOX1O00244 68 aa10.42□□□□□ -0.74
OTUB1-211ENST00000543004 MT1HP80294 61 aa10.42□□□□□ -0.74
OTUB1-211ENST00000543004 LOC101927531A0A1B0GV80 90 aa10.41□□□□□ -0.74
OTUB1-211ENST00000543004 C4orf26Q17RF5 130 aa10.41□□□□□ -0.74
OTUB1-211ENST00000543004 LINC00208Q96KT6 92 aa10.41□□□□□ -0.74
OTUB1-211ENST00000543004 C5orf47Q569G3 176 aa10.4□□□□□ -0.75
OTUB1-211ENST00000543004 C1orf64Q8NEQ6 169 aa10.4□□□□□ -0.75
OTUB1-211ENST00000543004 MP68P56378 58 aa10.38□□□□□ -0.75
OTUB1-211ENST00000543004 TRAV7A0A075B6U4 112 aa10.36□□□□□ -0.75
OTUB1-211ENST00000543004 SMIM20Q8N5G0 67 aa10.34□□□□□ -0.75
OTUB1-211ENST00000543004 KLKP1Q107X0 134 aa10.3□□□□□ -0.76
OTUB1-211ENST00000543004 KRTAP3-1Q9BYR8 98 aa10.29□□□□□ -0.76
OTUB1-211ENST00000543004 H3BPC8 53 aa10.26□□□□□ -0.77
OTUB1-211ENST00000543004 M0R2T5 61 aa10.25□□□□□ -0.77
OTUB1-211ENST00000543004 SERP2Q8N6R1 65 aa10.24□□□□□ -0.77
OTUB1-211ENST00000543004 H1FX-AS1Q4G0G2 97 aa10.22□□□□□ -0.77
OTUB1-211ENST00000543004 SNURFQ9Y675 71 aa10.18□□□□□ -0.78
OTUB1-211ENST00000543004 C20orf197Q8N268 126 aa10.15□□□□□ -0.79
OTUB1-211ENST00000543004 KRTAP10-6P60371 365 aaPredicted RBP10.12□□□□□ -0.79
OTUB1-211ENST00000543004 COX7CP15954 63 aa10.09□□□□□ -0.79
OTUB1-211ENST00000543004 LORP23490 312 aaPredicted RBP10.08□□□□□ -0.8
OTUB1-211ENST00000543004 ANAPC13Q9BS18 74 aa10.06□□□□□ -0.8
OTUB1-211ENST00000543004 S4R3F8 94 aa10.03□□□□□ -0.8
OTUB1-211ENST00000543004 LCA10Q71F78 164 aa10.02□□□□□ -0.81
OTUB1-211ENST00000543004 A8MUN3 132 aa9.97□□□□□ -0.81
OTUB1-211ENST00000543004 CYSTM1Q9H1C7 97 aa9.96□□□□□ -0.81
OTUB1-211ENST00000543004 DMAC1Q96GE9 116 aa9.96□□□□□ -0.82
OTUB1-211ENST00000543004 KRTAP9-8Q9BYQ0 159 aa9.96□□□□□ -0.82
OTUB1-211ENST00000543004 KRTAP3-3Q9BYR6 98 aa9.95□□□□□ -0.82
OTUB1-211ENST00000543004 CCDC179H3BU77 68 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms