RNA–Protein interactions for RNA: ENST00000542777.1

DDX11-222, Transcript of DEAD/H-box helicase 11, human

TSL 2

Gene DDX11, Length 489 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX11-222	ENST00000542777	RBM3	P98179	157 aa	Known RBP	8.18	□□□□□ -1.1
DDX11-222	ENST00000542777		H3BT86	120 aa		8.17	□□□□□ -1.1
DDX11-222	ENST00000542777	PRO0461	Q9UI25	63 aa		8.17	□□□□□ -1.1
DDX11-222	ENST00000542777	CCK	P06307	115 aa		8.16	□□□□□ -1.1
DDX11-222	ENST00000542777	DSCR10	P59022	87 aa		8.15	□□□□□ -1.1
DDX11-222	ENST00000542777	C14orf132	Q9NPU4	83 aa		8.15	□□□□□ -1.1
DDX11-222	ENST00000542777	VPS25	Q9BRG1	176 aa		8.14	□□□□□ -1.11
DDX11-222	ENST00000542777		Q6ZQT0	140 aa		8.13	□□□□□ -1.11
DDX11-222	ENST00000542777	DSCR8	Q96T75	97 aa		8.13	□□□□□ -1.11
DDX11-222	ENST00000542777	JMJD7-PLA2G4B	H0Y9G9	81 aa		8.11	□□□□□ -1.11
DDX11-222	ENST00000542777	LOC110117498	A0A087WWA1	95 aa		8.1	□□□□□ -1.11
DDX11-222	ENST00000542777	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	8.1	□□□□□ -1.11
DDX11-222	ENST00000542777	SIGMAR1	Q99720	223 aa		8.1	□□□□□ -1.11
DDX11-222	ENST00000542777	KRTAP9-7	A8MTY7	169 aa		8.08	□□□□□ -1.12
DDX11-222	ENST00000542777	KRTAP16-1	A8MUX0	517 aa		8.08	□□□□□ -1.12
DDX11-222	ENST00000542777	LINC00313	P59037	77 aa		8.08	□□□□□ -1.12
DDX11-222	ENST00000542777	USH2A	O75445	5202 aa		8.07	□□□□□ -1.12
DDX11-222	ENST00000542777	FAM236D	A0A1B0GTK5	79 aa		8.07	□□□□□ -1.12
DDX11-222	ENST00000542777	FAM236C	P0DP71	79 aa		8.07	□□□□□ -1.12
DDX11-222	ENST00000542777	SSPO	A2VEC9	5147 aa		8.06	□□□□□ -1.12
DDX11-222	ENST00000542777	DEFB116	Q30KQ4	102 aa		8.06	□□□□□ -1.12
DDX11-222	ENST00000542777	GTF2H5	Q6ZYL4	71 aa		8.06	□□□□□ -1.12
DDX11-222	ENST00000542777	IGKV4-1	P06312	121 aa		8.05	□□□□□ -1.12
DDX11-222	ENST00000542777	MT2A	P02795	61 aa		8.04	□□□□□ -1.12
DDX11-222	ENST00000542777	LINC00472	Q9H8W2	130 aa		8.04	□□□□□ -1.12
DDX11-222	ENST00000542777		A0A1B0GV90	55 aa		8.03	□□□□□ -1.12
DDX11-222	ENST00000542777	RBM12B-AS1	Q9P1G2	102 aa		8.02	□□□□□ -1.13
DDX11-222	ENST00000542777	HRES1	P13985	223 aa		8.01	□□□□□ -1.13
DDX11-222	ENST00000542777	PDE6G	P18545	87 aa		8.01	□□□□□ -1.13
DDX11-222	ENST00000542777	NOTCH2NL	Q7Z3S9	236 aa		8.01	□□□□□ -1.13
DDX11-222	ENST00000542777	MPLKIP	Q8TAP9	179 aa		8	□□□□□ -1.13
DDX11-222	ENST00000542777		F8W1H4	67 aa		7.98	□□□□□ -1.13
DDX11-222	ENST00000542777	MT1F	P04733	61 aa		7.98	□□□□□ -1.13
DDX11-222	ENST00000542777	ETDB	Q3ZM63	59 aa		7.98	□□□□□ -1.13
DDX11-222	ENST00000542777	IGHV6-1	A0A0B4J1U7	121 aa		7.96	□□□□□ -1.14
DDX11-222	ENST00000542777	LCE2B	O14633	110 aa		7.96	□□□□□ -1.14
DDX11-222	ENST00000542777	KRTAP10-10	P60014	251 aa		7.96	□□□□□ -1.14
DDX11-222	ENST00000542777	KRTAP9-3	Q9BYQ3	159 aa		7.94	□□□□□ -1.14
DDX11-222	ENST00000542777		A0A1B0GW54	56 aa		7.93	□□□□□ -1.14
DDX11-222	ENST00000542777	KRTAP19-1	Q8IUB9	90 aa		7.93	□□□□□ -1.14
DDX11-222	ENST00000542777	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	7.9	□□□□□ -1.14
DDX11-222	ENST00000542777	C21orf62-AS1	Q17RA5	79 aa		7.9	□□□□□ -1.14
DDX11-222	ENST00000542777	C8orf87	E5RJ46	101 aa		7.89	□□□□□ -1.15
DDX11-222	ENST00000542777	NREP	Q16612	68 aa		7.89	□□□□□ -1.15
DDX11-222	ENST00000542777		A0A1B0GVX0	72 aa		7.88	□□□□□ -1.15
DDX11-222	ENST00000542777		Q6ZVQ6	151 aa		7.88	□□□□□ -1.15
DDX11-222	ENST00000542777	LINC00846	Q9NV44	126 aa		7.88	□□□□□ -1.15
DDX11-222	ENST00000542777	IGKV3D-7	A0A0C4DH55	119 aa		7.86	□□□□□ -1.15
DDX11-222	ENST00000542777		J3KT08	172 aa		7.85	□□□□□ -1.15
DDX11-222	ENST00000542777	ZCCHC13	Q8WW36	166 aa	Known RBP	7.84	□□□□□ -1.15
DDX11-222	ENST00000542777		A8MWP4	228 aa		7.83	□□□□□ -1.16
DDX11-222	ENST00000542777	SPINK7	P58062	85 aa		7.82	□□□□□ -1.16
DDX11-222	ENST00000542777		K7EQZ3	153 aa		7.81	□□□□□ -1.16
DDX11-222	ENST00000542777		Q8N9L7	120 aa		7.8	□□□□□ -1.16
DDX11-222	ENST00000542777	PRR15	Q8IV56	129 aa		7.79	□□□□□ -1.16
DDX11-222	ENST00000542777	C8orf17	Q9NRJ1	99 aa		7.79	□□□□□ -1.16
DDX11-222	ENST00000542777	BPY2	O14599	106 aa		7.78	□□□□□ -1.16
DDX11-222	ENST00000542777	NDUFB1	O75438	58 aa		7.77	□□□□□ -1.17
DDX11-222	ENST00000542777	MMP24-AS1	A0A0U1RRL7	71 aa		7.76	□□□□□ -1.17
DDX11-222	ENST00000542777		Q8N9P0	234 aa	Predicted RBP	7.76	□□□□□ -1.17
DDX11-222	ENST00000542777	UBL5	Q9BZL1	73 aa		7.76	□□□□□ -1.17
DDX11-222	ENST00000542777	WFDC13	Q8IUB5	93 aa		7.72	□□□□□ -1.17
DDX11-222	ENST00000542777	KRTAP19-6	Q3LI70	58 aa		7.71	□□□□□ -1.18
DDX11-222	ENST00000542777	FAM240A	A0A1B0GVK7	77 aa		7.69	□□□□□ -1.18
DDX11-222	ENST00000542777	MACF1	Q9UPN3	7388 aa	Known RBP	7.68	□□□□□ -1.18
DDX11-222	ENST00000542777	TMEM254	Q8TBM7	123 aa		7.67	□□□□□ -1.18
DDX11-222	ENST00000542777	ACYP1	P07311	99 aa		7.66	□□□□□ -1.18
DDX11-222	ENST00000542777	hDV103S1	A0JD37	113 aa		7.65	□□□□□ -1.18
DDX11-222	ENST00000542777	MRPL34	Q9BQ48	92 aa	Known RBP	7.65	□□□□□ -1.18
DDX11-222	ENST00000542777	CXCL6	P80162	114 aa		7.63	□□□□□ -1.19
DDX11-222	ENST00000542777	CASC2	Q6XLA1	102 aa		7.62	□□□□□ -1.19
DDX11-222	ENST00000542777	SYNE2	Q8WXH0	6885 aa	Known RBP	7.61	□□□□□ -1.19
DDX11-222	ENST00000542777	HCG22	E2RYF7	251 aa		7.59	□□□□□ -1.19
DDX11-222	ENST00000542777	H1FX-AS1	Q4G0G2	97 aa		7.58	□□□□□ -1.2
DDX11-222	ENST00000542777	NDUFS5	O43920	106 aa		7.56	□□□□□ -1.2
DDX11-222	ENST00000542777		Q5W150	140 aa		7.55	□□□□□ -1.2
DDX11-222	ENST00000542777	LINC00643	Q86TS7	51 aa		7.54	□□□□□ -1.2
DDX11-222	ENST00000542777	ATP5EP2	Q5VTU8	51 aa		7.53	□□□□□ -1.2
DDX11-222	ENST00000542777		A0A087WVE0	104 aa		7.51	□□□□□ -1.21
DDX11-222	ENST00000542777		J3QR89	54 aa		7.51	□□□□□ -1.21
DDX11-222	ENST00000542777	KRTAP6-3	Q3LI67	103 aa		7.5	□□□□□ -1.21
DDX11-222	ENST00000542777	HIST1H4A	P62805	103 aa	Known RBP	7.49	□□□□□ -1.21
DDX11-222	ENST00000542777	IGKV2D-30	A0A075B6S6	120 aa		7.47	□□□□□ -1.21
DDX11-222	ENST00000542777	IGKV2-30	P06310	120 aa		7.47	□□□□□ -1.21
DDX11-222	ENST00000542777	C7orf65	Q6ZTY9	151 aa		7.43	□□□□□ -1.22
DDX11-222	ENST00000542777		K7ERU9	68 aa		7.42	□□□□□ -1.22
DDX11-222	ENST00000542777	MT-ATP8	P03928	68 aa		7.4	□□□□□ -1.22
DDX11-222	ENST00000542777	C4orf26	Q17RF5	130 aa		7.37	□□□□□ -1.23
DDX11-222	ENST00000542777	TP53AIP1	Q9HCN2	124 aa		7.36	□□□□□ -1.23
DDX11-222	ENST00000542777	C5orf47	Q569G3	176 aa		7.32	□□□□□ -1.24
DDX11-222	ENST00000542777	FAM236A	A0A1B0GUQ0	79 aa		7.31	□□□□□ -1.24
DDX11-222	ENST00000542777	FAM236B	A0A1B0GV22	79 aa		7.31	□□□□□ -1.24
DDX11-222	ENST00000542777	OCR1	Q9BZK8	76 aa		7.3	□□□□□ -1.24
DDX11-222	ENST00000542777	TRAV22	A0A0B4J277	110 aa		7.29	□□□□□ -1.24
DDX11-222	ENST00000542777		A6NN06	94 aa		7.29	□□□□□ -1.24
DDX11-222	ENST00000542777	UQCRQ	O14949	82 aa		7.27	□□□□□ -1.25
DDX11-222	ENST00000542777		H0Y9P7	68 aa		7.26	□□□□□ -1.25
DDX11-222	ENST00000542777	MT1B	P07438	61 aa		7.26	□□□□□ -1.25
DDX11-222	ENST00000542777		Q5VV11	94 aa		7.25	□□□□□ -1.25
DDX11-222	ENST00000542777	KRTAP3-1	Q9BYR8	98 aa		7.25	□□□□□ -1.25

Retrieved 100 of 20,778 RNA–protein pairs in 78 ms