RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 LEAP2Q969E1 77 aa2.03□□□□□ -2.08
SNHG1-217ENST00000541578 SNURFQ9Y675 71 aa2.03□□□□□ -2.08
SNHG1-217ENST00000541578 MUC19Q7Z5P9 8384 aa2.03□□□□□ -2.08
SNHG1-217ENST00000541578 VPS13DQ5THJ4 4388 aa2.02□□□□□ -2.09
SNHG1-217ENST00000541578 LOC101927531A0A1B0GV80 90 aa2.02□□□□□ -2.09
SNHG1-217ENST00000541578 IGIPA6NJ69 53 aa2.02□□□□□ -2.09
SNHG1-217ENST00000541578 I3L3M4 83 aa2.02□□□□□ -2.09
SNHG1-217ENST00000541578 SPART-AS1P0CW21 52 aa2.02□□□□□ -2.09
SNHG1-217ENST00000541578 CCL18P55774 89 aa2.02□□□□□ -2.09
SNHG1-217ENST00000541578 DEFB104AQ8WTQ1 72 aa2.02□□□□□ -2.09
SNHG1-217ENST00000541578 CDC42SE2Q9NRR3 84 aa2.02□□□□□ -2.09
SNHG1-217ENST00000541578 LINC00846Q9NV44 126 aa2.02□□□□□ -2.09
SNHG1-217ENST00000541578 TMEM14CQ9P0S9 112 aa2.02□□□□□ -2.09
SNHG1-217ENST00000541578 DNAH11Q96DT5 4516 aa2.01□□□□□ -2.09
SNHG1-217ENST00000541578 FLG2Q5D862 2391 aaPredicted RBP2.01□□□□□ -2.09
SNHG1-217ENST00000541578 M0R3E3 92 aa2.01□□□□□ -2.09
SNHG1-217ENST00000541578 SAA2P0DJI9 122 aaPredicted RBP2.01□□□□□ -2.09
SNHG1-217ENST00000541578 ELOF1P60002 83 aaKnown RBP2.01□□□□□ -2.09
SNHG1-217ENST00000541578 PRCDQ00LT1 54 aa2.01□□□□□ -2.09
SNHG1-217ENST00000541578 Q5VSD8 79 aa2.01□□□□□ -2.09
SNHG1-217ENST00000541578 ZNF833PQ6ZTB9 187 aa2.01□□□□□ -2.09
SNHG1-217ENST00000541578 Q8N814 137 aa2.01□□□□□ -2.09
SNHG1-217ENST00000541578 UBL5Q9BZL1 73 aa2.01□□□□□ -2.09
SNHG1-217ENST00000541578 WFDC10AQ9H1F0 79 aa2.01□□□□□ -2.09
SNHG1-217ENST00000541578 DNAH2Q9P225 4427 aa2.01□□□□□ -2.09
SNHG1-217ENST00000541578 NBDYA0A0U1RRE5 68 aa2□□□□□ -2.09
SNHG1-217ENST00000541578 JMJD7-PLA2G4BH0Y9G9 81 aa2□□□□□ -2.09
SNHG1-217ENST00000541578 CRPP02741 224 aa2□□□□□ -2.09
SNHG1-217ENST00000541578 NREPQ16612 68 aa2□□□□□ -2.09
SNHG1-217ENST00000541578 FAM74A4Q5TZK3 123 aa2□□□□□ -2.09
SNHG1-217ENST00000541578 ENHOQ6UWT2 76 aa2□□□□□ -2.09
SNHG1-217ENST00000541578 HSPG2P98160 4391 aa2□□□□□ -2.09
SNHG1-217ENST00000541578 FAT2Q9NYQ8 4349 aa1.99□□□□□ -2.09
SNHG1-217ENST00000541578 NDUFA4O00483 81 aa1.99□□□□□ -2.09
SNHG1-217ENST00000541578 NDUFB1O75438 58 aa1.99□□□□□ -2.09
SNHG1-217ENST00000541578 PDE6HQ13956 83 aa1.99□□□□□ -2.09
SNHG1-217ENST00000541578 AMELXQ99217 191 aa1.99□□□□□ -2.09
SNHG1-217ENST00000541578 C22orf24Q9Y442 160 aa1.99□□□□□ -2.09
SNHG1-217ENST00000541578 VPS13BQ7Z7G8 4022 aa1.99□□□□□ -2.09
SNHG1-217ENST00000541578 DEFB4AO15263 64 aa1.98□□□□□ -2.09
SNHG1-217ENST00000541578 ROMO1P60602 79 aa1.98□□□□□ -2.09
SNHG1-217ENST00000541578 KLK9Q2XQG4 91 aa1.98□□□□□ -2.09
SNHG1-217ENST00000541578 RPL39P5Q59GN2 51 aa1.98□□□□□ -2.09
SNHG1-217ENST00000541578 KRTAP5-7Q6L8G8 165 aa1.98□□□□□ -2.09
SNHG1-217ENST00000541578 Q6ZQT0 140 aa1.98□□□□□ -2.09
SNHG1-217ENST00000541578 TMEM167AQ8TBQ9 72 aa1.98□□□□□ -2.09
SNHG1-217ENST00000541578 PRR15LQ9BU68 103 aa1.98□□□□□ -2.09
SNHG1-217ENST00000541578 CNFNQ9BYD5 112 aa1.98□□□□□ -2.09
SNHG1-217ENST00000541578 KLK9Q9UKQ9 250 aa1.98□□□□□ -2.09
SNHG1-217ENST00000541578 UBR4Q5T4S7 5183 aa1.97□□□□□ -2.09
SNHG1-217ENST00000541578 H0YGX0 51 aa1.97□□□□□ -2.09
SNHG1-217ENST00000541578 KRTAP5-8O75690 187 aa1.97□□□□□ -2.09
SNHG1-217ENST00000541578 PRB4P10163 310 aaPredicted RBP1.97□□□□□ -2.09
SNHG1-217ENST00000541578 SPINK9Q5DT21 86 aa1.97□□□□□ -2.09
SNHG1-217ENST00000541578 C10orf113Q5VZT2 155 aa1.97□□□□□ -2.09
SNHG1-217ENST00000541578 Q86TA4 180 aa1.97□□□□□ -2.09
SNHG1-217ENST00000541578 C14orf132Q9NPU4 83 aa1.97□□□□□ -2.09
SNHG1-217ENST00000541578 NDUFA4L2Q9NRX3 87 aa1.97□□□□□ -2.09
SNHG1-217ENST00000541578 MRPL36Q9P0J6 103 aaKnown RBP1.97□□□□□ -2.09
SNHG1-217ENST00000541578 APOBP04114 4563 aaKnown RBP1.96□□□□□ -2.1
SNHG1-217ENST00000541578 TRAV12-3A0A0B4J271 114 aa1.96□□□□□ -2.1
SNHG1-217ENST00000541578 TRBV6-5A0A0K0K1A5 114 aa1.96□□□□□ -2.1
SNHG1-217ENST00000541578 SMR3BP02814 79 aaPredicted RBP1.96□□□□□ -2.1
SNHG1-217ENST00000541578 PDE6GP18545 87 aa1.96□□□□□ -2.1
SNHG1-217ENST00000541578 DEFB131AP59861 70 aa1.96□□□□□ -2.1
SNHG1-217ENST00000541578 RHPN1-AS1Q9BWJ2 59 aa1.96□□□□□ -2.1
SNHG1-217ENST00000541578 LRP1BQ9NZR2 4599 aa1.95□□□□□ -2.1
SNHG1-217ENST00000541578 A0A087WSZ3 146 aa1.95□□□□□ -2.1
SNHG1-217ENST00000541578 APELAP0DMC3 54 aa1.95□□□□□ -2.1
SNHG1-217ENST00000541578 HTN3P15516 51 aa1.95□□□□□ -2.1
SNHG1-217ENST00000541578 WT1-ASQ06250 92 aa1.95□□□□□ -2.1
SNHG1-217ENST00000541578 COA5Q86WW8 74 aa1.95□□□□□ -2.1
SNHG1-217ENST00000541578 SMIM2Q9BVW6 85 aa1.95□□□□□ -2.1
SNHG1-217ENST00000541578 ORMDL1Q9P0S3 153 aa1.95□□□□□ -2.1
SNHG1-217ENST00000541578 LENEPQ9Y5L5 61 aa1.95□□□□□ -2.1
SNHG1-217ENST00000541578 DNAH5Q8TE73 4624 aa1.94□□□□□ -2.1
SNHG1-217ENST00000541578 IGKV3-7A0A075B6H7 116 aa1.94□□□□□ -2.1
SNHG1-217ENST00000541578 LOC110117498A0A087WWA1 95 aa1.94□□□□□ -2.1
SNHG1-217ENST00000541578 TRAV21A0A0B4J279 112 aa1.94□□□□□ -2.1
SNHG1-217ENST00000541578 H3BNG1 76 aa1.94□□□□□ -2.1
SNHG1-217ENST00000541578 TPRXLQ17RH7 258 aa1.94□□□□□ -2.1
SNHG1-217ENST00000541578 ZCCHC13Q8WW36 166 aaKnown RBP1.94□□□□□ -2.1
SNHG1-217ENST00000541578 LINC00208Q96KT6 92 aa1.94□□□□□ -2.1
SNHG1-217ENST00000541578 LINC01558Q9Y6Z2 57 aa1.94□□□□□ -2.1
SNHG1-217ENST00000541578 MYCBP2O75592 4640 aa1.93□□□□□ -2.1
SNHG1-217ENST00000541578 TRGV2A0A075B6R0 118 aa1.93□□□□□ -2.1
SNHG1-217ENST00000541578 I3L2K1 104 aa1.93□□□□□ -2.1
SNHG1-217ENST00000541578 CNBPP62633 177 aaKnown RBP1.93□□□□□ -2.1
SNHG1-217ENST00000541578 MIR22HGQ0VDD5 57 aa1.93□□□□□ -2.1
SNHG1-217ENST00000541578 ZNF625Q96I27 306 aaPredicted RBP1.93□□□□□ -2.1
SNHG1-217ENST00000541578 PLAC8Q9NZF1 115 aa1.93□□□□□ -2.1
SNHG1-217ENST00000541578 A0A087WTM6 91 aa1.92□□□□□ -2.1
SNHG1-217ENST00000541578 TRBV10-1A0A0K0K1A3 114 aa1.92□□□□□ -2.1
SNHG1-217ENST00000541578 SPAG11BQ08648 103 aa1.92□□□□□ -2.1
SNHG1-217ENST00000541578 C10orf55Q5SWW7 151 aa1.92□□□□□ -2.1
SNHG1-217ENST00000541578 SPAG11AQ6PDA7 123 aa1.92□□□□□ -2.1
SNHG1-217ENST00000541578 COX7B2Q8TF08 81 aa1.92□□□□□ -2.1
SNHG1-217ENST00000541578 FAT1Q14517 4588 aa1.91□□□□□ -2.1
SNHG1-217ENST00000541578 K7EIM0 57 aa1.91□□□□□ -2.1
SNHG1-217ENST00000541578 DEFB130BP0DP73 79 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms