RNA–Protein interactions for RNA: ENST00000541478.5

OTUB1-210, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-210ENST00000541478 LIMD2Q9BT23 127 aa11.71□□□□□ -0.54
OTUB1-210ENST00000541478 C4orf48Q5BLP8 95 aa11.69□□□□□ -0.54
OTUB1-210ENST00000541478 MP68P56378 58 aa11.67□□□□□ -0.54
OTUB1-210ENST00000541478 FAM236DA0A1B0GTK5 79 aa11.65□□□□□ -0.55
OTUB1-210ENST00000541478 FAM236CP0DP71 79 aa11.65□□□□□ -0.55
OTUB1-210ENST00000541478 SPINK1P00995 79 aa11.63□□□□□ -0.55
OTUB1-210ENST00000541478 TP53AIP1Q9HCN2 124 aa11.63□□□□□ -0.55
OTUB1-210ENST00000541478 FAT1Q14517 4588 aa11.62□□□□□ -0.55
OTUB1-210ENST00000541478 C8orf87E5RJ46 101 aa11.61□□□□□ -0.55
OTUB1-210ENST00000541478 KRTAP10-4P60372 401 aaPredicted RBP11.61□□□□□ -0.55
OTUB1-210ENST00000541478 MRPL34Q9BQ48 92 aaKnown RBP11.61□□□□□ -0.55
OTUB1-210ENST00000541478 H3BPC8 53 aa11.6□□□□□ -0.55
OTUB1-210ENST00000541478 C1orf195Q5TG92 126 aa11.6□□□□□ -0.55
OTUB1-210ENST00000541478 EPPK1P58107 5090 aaKnown RBP11.59□□□□□ -0.55
OTUB1-210ENST00000541478 ATP5EP56381 51 aaPredicted RBP11.59□□□□□ -0.55
OTUB1-210ENST00000541478 PRR26Q8N8Z3 221 aa11.59□□□□□ -0.55
OTUB1-210ENST00000541478 ZCCHC13Q8WW36 166 aaKnown RBP11.59□□□□□ -0.55
OTUB1-210ENST00000541478 H0Y9P7 68 aa11.58□□□□□ -0.56
OTUB1-210ENST00000541478 SPAG11AQ6PDA7 123 aa11.58□□□□□ -0.56
OTUB1-210ENST00000541478 TRAV22A0A0B4J277 110 aa11.56□□□□□ -0.56
OTUB1-210ENST00000541478 RPS29P62273 56 aaKnown RBP11.56□□□□□ -0.56
OTUB1-210ENST00000541478 NOTCH2NLQ7Z3S9 236 aa11.56□□□□□ -0.56
OTUB1-210ENST00000541478 LINC00304Q8N9R0 145 aa11.56□□□□□ -0.56
OTUB1-210ENST00000541478 NDUFS5O43920 106 aa11.56□□□□□ -0.56
OTUB1-210ENST00000541478 RPS28P62857 69 aaKnown RBP11.55□□□□□ -0.56
OTUB1-210ENST00000541478 LINC00208Q96KT6 92 aa11.53□□□□□ -0.56
OTUB1-210ENST00000541478 FAM229AH3BQW9 127 aa11.53□□□□□ -0.56
OTUB1-210ENST00000541478 LINC00313P59037 77 aa11.51□□□□□ -0.57
OTUB1-210ENST00000541478 C1orf64Q8NEQ6 169 aa11.47□□□□□ -0.57
OTUB1-210ENST00000541478 SERP1Q9Y6X1 66 aa11.45□□□□□ -0.58
OTUB1-210ENST00000541478 PKHD1L1Q86WI1 4243 aa11.42□□□□□ -0.58
OTUB1-210ENST00000541478 HSPG2P98160 4391 aa11.4□□□□□ -0.58
OTUB1-210ENST00000541478 Q5VSD8 79 aa11.39□□□□□ -0.59
OTUB1-210ENST00000541478 Q8N9P0 234 aaPredicted RBP11.38□□□□□ -0.59
OTUB1-210ENST00000541478 BIRC6Q9NR09 4857 aa11.35□□□□□ -0.59
OTUB1-210ENST00000541478 SPANXA2-OT1Q8N9U9 137 aa11.34□□□□□ -0.59
OTUB1-210ENST00000541478 KRTAP16-1A8MUX0 517 aa11.33□□□□□ -0.6
OTUB1-210ENST00000541478 KIAA1109Q2LD37 5005 aa11.33□□□□□ -0.6
OTUB1-210ENST00000541478 OXTP01178 125 aa11.32□□□□□ -0.6
OTUB1-210ENST00000541478 LOC101927531A0A1B0GV80 90 aa11.31□□□□□ -0.6
OTUB1-210ENST00000541478 CYP4F30PQ9H0H9 118 aa11.31□□□□□ -0.6
OTUB1-210ENST00000541478 RYR1P21817 5038 aa11.31□□□□□ -0.6
OTUB1-210ENST00000541478 KRTAP13-3Q3SY46 172 aa11.29□□□□□ -0.6
OTUB1-210ENST00000541478 Q5W150 140 aa11.29□□□□□ -0.6
OTUB1-210ENST00000541478 PCOTHQ58A44 107 aa11.25□□□□□ -0.61
OTUB1-210ENST00000541478 PRR4Q16378 134 aa11.24□□□□□ -0.61
OTUB1-210ENST00000541478 KRTAP17-1Q9BYP8 105 aa11.24□□□□□ -0.61
OTUB1-210ENST00000541478 IGLV7-46A0A075B6I9 117 aa11.21□□□□□ -0.61
OTUB1-210ENST00000541478 Q8N1X5 172 aa11.2□□□□□ -0.62
OTUB1-210ENST00000541478 SMIM26A0A096LP01 95 aa11.19□□□□□ -0.62
OTUB1-210ENST00000541478 KRTAP10-8P60410 259 aa11.19□□□□□ -0.62
OTUB1-210ENST00000541478 TNXBP22105 4242 aa11.17□□□□□ -0.62
OTUB1-210ENST00000541478 RETNLBQ9BQ08 111 aa11.15□□□□□ -0.62
OTUB1-210ENST00000541478 LRP1Q07954 4544 aaKnown RBP11.14□□□□□ -0.63
OTUB1-210ENST00000541478 IGKV2-30P06310 120 aa11.12□□□□□ -0.63
OTUB1-210ENST00000541478 FLG2Q5D862 2391 aaPredicted RBP11.1□□□□□ -0.63
OTUB1-210ENST00000541478 HERC2O95714 4834 aa11.1□□□□□ -0.63
OTUB1-210ENST00000541478 FAT3Q8TDW7 4589 aa11.09□□□□□ -0.63
OTUB1-210ENST00000541478 C9orf92A6NGG3 77 aa11.09□□□□□ -0.63
OTUB1-210ENST00000541478 C20orf166-AS1Q96NR2 134 aa11.07□□□□□ -0.64
OTUB1-210ENST00000541478 KRTAP4-5Q9BYR2 181 aa11.07□□□□□ -0.64
OTUB1-210ENST00000541478 FP248Q71RG6 208 aaPredicted RBP11.05□□□□□ -0.64
OTUB1-210ENST00000541478 A8MUU9 505 aa11.04□□□□□ -0.64
OTUB1-210ENST00000541478 IGKV2D-30A0A075B6S6 120 aa11.02□□□□□ -0.65
OTUB1-210ENST00000541478 HRES1P13985 223 aa11□□□□□ -0.65
OTUB1-210ENST00000541478 COA5Q86WW8 74 aa11□□□□□ -0.65
OTUB1-210ENST00000541478 C7orf65Q6ZTY9 151 aa10.98□□□□□ -0.65
OTUB1-210ENST00000541478 MT1HL1P0DM35 61 aa10.95□□□□□ -0.66
OTUB1-210ENST00000541478 C4orf26Q17RF5 130 aa10.95□□□□□ -0.66
OTUB1-210ENST00000541478 MPLKIPQ8TAP9 179 aa10.95□□□□□ -0.66
OTUB1-210ENST00000541478 Q75L30 129 aa10.93□□□□□ -0.66
OTUB1-210ENST00000541478 MYCBP2O75592 4640 aa10.92□□□□□ -0.66
OTUB1-210ENST00000541478 ACYP2P14621 99 aa10.92□□□□□ -0.66
OTUB1-210ENST00000541478 DMAC1Q96GE9 116 aa10.92□□□□□ -0.66
OTUB1-210ENST00000541478 Q1T7F1 81 aa10.9□□□□□ -0.66
OTUB1-210ENST00000541478 V9GYY9 64 aa10.88□□□□□ -0.67
OTUB1-210ENST00000541478 DMBT1Q9UGM3 2413 aaPredicted RBP10.88□□□□□ -0.67
OTUB1-210ENST00000541478 ABCA13Q86UQ4 5058 aa10.87□□□□□ -0.67
OTUB1-210ENST00000541478 CHKB-CPT1BH3BT56 60 aa10.78□□□□□ -0.68
OTUB1-210ENST00000541478 ATP11AUNQ6ZP68 121 aa10.77□□□□□ -0.68
OTUB1-210ENST00000541478 RPL37P61927 97 aaKnown RBP10.75□□□□□ -0.69
OTUB1-210ENST00000541478 A8MUN3 132 aa10.74□□□□□ -0.69
OTUB1-210ENST00000541478 SPINK7P58062 85 aa10.74□□□□□ -0.69
OTUB1-210ENST00000541478 XP32Q5T750 250 aa10.74□□□□□ -0.69
OTUB1-210ENST00000541478 PCLOQ9Y6V0 5065 aa10.71□□□□□ -0.69
OTUB1-210ENST00000541478 PSPHP1O15172 72 aa10.68□□□□□ -0.7
OTUB1-210ENST00000541478 TPRXLQ17RH7 258 aa10.65□□□□□ -0.71
OTUB1-210ENST00000541478 LINC01558Q9Y6Z2 57 aa10.65□□□□□ -0.71
OTUB1-210ENST00000541478 PRR15LQ9BU68 103 aa10.63□□□□□ -0.71
OTUB1-210ENST00000541478 J3QL48 77 aa10.61□□□□□ -0.71
OTUB1-210ENST00000541478 Q5VV11 94 aa10.58□□□□□ -0.72
OTUB1-210ENST00000541478 COX6B2Q6YFQ2 88 aa10.53□□□□□ -0.72
OTUB1-210ENST00000541478 BRK1Q8WUW1 75 aa10.51□□□□□ -0.73
OTUB1-210ENST00000541478 SPTSSBQ8NFR3 76 aa10.5□□□□□ -0.73
OTUB1-210ENST00000541478 KRTAP3-1Q9BYR8 98 aa10.5□□□□□ -0.73
OTUB1-210ENST00000541478 A0A1B0GU69 56 aa10.42□□□□□ -0.74
OTUB1-210ENST00000541478 PRO0628Q9UI54 55 aa10.42□□□□□ -0.74
OTUB1-210ENST00000541478 A6NED7 52 aa10.38□□□□□ -0.75
OTUB1-210ENST00000541478 LRP2P98164 4655 aa10.38□□□□□ -0.75
OTUB1-210ENST00000541478 LPAP08519 4548 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms