RNA–Protein interactions for RNA: ENST00000541377.5

CLASP1-215, Transcript of cytoplasmic linker associated protein 1, humanhuman

TSL 5 BASIC

Gene CLASP1, Length 7,909 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLASP1-215ENST00000541377 VCANP13611 3396 aa5□□□□□ -1.61
CLASP1-215ENST00000541377 TENM4Q6N022 2769 aa5□□□□□ -1.61
CLASP1-215ENST00000541377 TENM3Q9P273 2699 aa5□□□□□ -1.61
CLASP1-215ENST00000541377 COL12A1Q99715 3063 aa4.99□□□□□ -1.61
CLASP1-215ENST00000541377 ITPR1Q14643 2758 aa4.99□□□□□ -1.61
CLASP1-215ENST00000541377 CHD7Q9P2D1 2997 aa4.98□□□□□ -1.61
CLASP1-215ENST00000541377 KALRNO60229 2985 aa4.97□□□□□ -1.61
CLASP1-215ENST00000541377 PP632Q6XCG6 107 aa4.96□□□□□ -1.62
CLASP1-215ENST00000541377 LRBAP50851 2863 aa4.95□□□□□ -1.62
CLASP1-215ENST00000541377 KRTAP13-2Q52LG2 175 aa4.95□□□□□ -1.62
CLASP1-215ENST00000541377 HTTP42858 3142 aa4.95□□□□□ -1.62
CLASP1-215ENST00000541377 KRTAP4-16G5E9R7 235 aaPredicted RBP4.95□□□□□ -1.62
CLASP1-215ENST00000541377 DNAH14Q0VDD8 3507 aa4.94□□□□□ -1.62
CLASP1-215ENST00000541377 A6NN06 94 aa4.92□□□□□ -1.62
CLASP1-215ENST00000541377 RANBP2P49792 3224 aaKnown RBP4.92□□□□□ -1.62
CLASP1-215ENST00000541377 SPEGQ15772 3267 aa4.91□□□□□ -1.62
CLASP1-215ENST00000541377 CELSR2Q9HCU4 2923 aa4.9□□□□□ -1.62
CLASP1-215ENST00000541377 TACC2O95359 2948 aa4.9□□□□□ -1.63
CLASP1-215ENST00000541377 KRTAP29-1A8MX34 341 aaPredicted RBP4.89□□□□□ -1.63
CLASP1-215ENST00000541377 CFAP47Q6ZTR5 3102 aa4.89□□□□□ -1.63
CLASP1-215ENST00000541377 KRTAP11-1Q8IUC1 163 aa4.89□□□□□ -1.63
CLASP1-215ENST00000541377 TPRXLQ17RH7 258 aa4.88□□□□□ -1.63
CLASP1-215ENST00000541377 XP32Q5T750 250 aa4.88□□□□□ -1.63
CLASP1-215ENST00000541377 BRCA2P51587 3418 aa4.88□□□□□ -1.63
CLASP1-215ENST00000541377 ZZEF1O43149 2961 aa4.88□□□□□ -1.63
CLASP1-215ENST00000541377 PDZD2O15018 2839 aa4.86□□□□□ -1.63
CLASP1-215ENST00000541377 USP34Q70CQ2 3546 aa4.85□□□□□ -1.63
CLASP1-215ENST00000541377 COL6A3P12111 3177 aa4.85□□□□□ -1.63
CLASP1-215ENST00000541377 BOD1L1Q8NFC6 3051 aa4.83□□□□□ -1.64
CLASP1-215ENST00000541377 NIPBLQ6KC79 2804 aaeCLIP4.83□□□□□ -1.64
CLASP1-215ENST00000541377 PKD1L1Q8TDX9 2849 aa4.83□□□□□ -1.64
CLASP1-215ENST00000541377 ATMQ13315 3056 aa4.82□□□□□ -1.64
CLASP1-215ENST00000541377 VWFP04275 2813 aa4.79□□□□□ -1.64
CLASP1-215ENST00000541377 CELSR1Q9NYQ6 3014 aa4.77□□□□□ -1.65
CLASP1-215ENST00000541377 ADGRG4Q8IZF6 3080 aa4.76□□□□□ -1.65
CLASP1-215ENST00000541377 DCHS2Q6V1P9 2916 aa4.76□□□□□ -1.65
CLASP1-215ENST00000541377 KRTAP13-1Q8IUC0 172 aa4.75□□□□□ -1.65
CLASP1-215ENST00000541377 CDH23Q9H251 3354 aa4.73□□□□□ -1.65
CLASP1-215ENST00000541377 NBEAQ8NFP9 2946 aa4.73□□□□□ -1.65
CLASP1-215ENST00000541377 NBPF19A0A087WUL8 3843 aa4.71□□□□□ -1.66
CLASP1-215ENST00000541377 ZANQ9Y493 2812 aa4.69□□□□□ -1.66
CLASP1-215ENST00000541377 KRTAP7-1Q8IUC3 87 aa4.67□□□□□ -1.66
CLASP1-215ENST00000541377 ZFHX4Q86UP3 3567 aa4.67□□□□□ -1.66
CLASP1-215ENST00000541377 TGP01266 2768 aa4.66□□□□□ -1.66
CLASP1-215ENST00000541377 TENM2Q9NT68 2774 aa4.66□□□□□ -1.66
CLASP1-215ENST00000541377 KRTAP13-3Q3SY46 172 aa4.64□□□□□ -1.67
CLASP1-215ENST00000541377 SZT2Q5T011 3432 aa4.63□□□□□ -1.67
CLASP1-215ENST00000541377 DMXL1Q9Y485 3027 aa4.62□□□□□ -1.67
CLASP1-215ENST00000541377 KRTAP1-4P0C5Y4 121 aa4.61□□□□□ -1.67
CLASP1-215ENST00000541377 EYSQ5T1H1 3165 aa4.61□□□□□ -1.67
CLASP1-215ENST00000541377 SRRM2Q9UQ35 2752 aaKnown RBP4.6□□□□□ -1.67
CLASP1-215ENST00000541377 KRTAP12-2P59991 146 aa4.54□□□□□ -1.68
CLASP1-215ENST00000541377 H0YAA0 97 aa4.53□□□□□ -1.68
CLASP1-215ENST00000541377 ZFHX3Q15911 3703 aa4.52□□□□□ -1.69
CLASP1-215ENST00000541377 ASPMQ8IZT6 3477 aa4.52□□□□□ -1.69
CLASP1-215ENST00000541377 KRTAP15-1Q3LI76 137 aa4.51□□□□□ -1.69
CLASP1-215ENST00000541377 SPTBN5Q9NRC6 3674 aaKnown RBP4.51□□□□□ -1.69
CLASP1-215ENST00000541377 CRCT1Q9UGL9 99 aa4.5□□□□□ -1.69
CLASP1-215ENST00000541377 FBN2P35556 2912 aa4.5□□□□□ -1.69
CLASP1-215ENST00000541377 COL7A1Q02388 2944 aa4.49□□□□□ -1.69
CLASP1-215ENST00000541377 MEGF8Q7Z7M0 2845 aa4.45□□□□□ -1.7
CLASP1-215ENST00000541377 LOC400499M0QZD8 3231 aa4.44□□□□□ -1.7
CLASP1-215ENST00000541377 MYO15AQ9UKN7 3530 aa4.43□□□□□ -1.7
CLASP1-215ENST00000541377 KRTAP13-4Q3LI77 160 aa4.41□□□□□ -1.7
CLASP1-215ENST00000541377 FBN3Q75N90 2809 aa4.4□□□□□ -1.7
CLASP1-215ENST00000541377 WDFY3Q8IZQ1 3526 aa4.39□□□□□ -1.71
CLASP1-215ENST00000541377 MXRA5Q9NR99 2828 aa4.36□□□□□ -1.71
CLASP1-215ENST00000541377 DCHS1Q96JQ0 3298 aa4.3□□□□□ -1.72
CLASP1-215ENST00000541377 LAMA5O15230 3695 aa4.26□□□□□ -1.73
CLASP1-215ENST00000541377 KRTAP10-12P60413 245 aa4.23□□□□□ -1.73
CLASP1-215ENST00000541377 KRTAP12-1P59990 96 aa4.22□□□□□ -1.73
CLASP1-215ENST00000541377 HRNRQ86YZ3 2850 aaPredicted RBP4.21□□□□□ -1.74
CLASP1-215ENST00000541377 KRTAP10-6P60371 365 aaPredicted RBP4.2□□□□□ -1.74
CLASP1-215ENST00000541377 SPENQ96T58 3664 aaKnown RBP4.2□□□□□ -1.74
CLASP1-215ENST00000541377 DMDP11532 3685 aa4.19□□□□□ -1.74
CLASP1-215ENST00000541377 RELNP78509 3460 aa4.18□□□□□ -1.74
CLASP1-215ENST00000541377 LORP23490 312 aaPredicted RBP4.18□□□□□ -1.74
CLASP1-215ENST00000541377 FBN1P35555 2871 aaKnown RBP4.14□□□□□ -1.75
CLASP1-215ENST00000541377 KRTAP8-1Q8IUC2 63 aa4.11□□□□□ -1.75
CLASP1-215ENST00000541377 INE1O15225 51 aa4.1□□□□□ -1.75
CLASP1-215ENST00000541377 MUC3AQ02505 3323 aa4.1□□□□□ -1.75
CLASP1-215ENST00000541377 SMG1Q96Q15 3661 aaKnown RBP4.07□□□□□ -1.76
CLASP1-215ENST00000541377 KRTAP10-5P60370 271 aa4.03□□□□□ -1.76
CLASP1-215ENST00000541377 CSMD1Q96PZ7 3565 aa4.03□□□□□ -1.76
CLASP1-215ENST00000541377 KRTAP12-3P60328 96 aa4.02□□□□□ -1.77
CLASP1-215ENST00000541377 OTOGQ6ZRI0 2925 aa4.01□□□□□ -1.77
CLASP1-215ENST00000541377 KRTAP23-1A1A580 65 aa4□□□□□ -1.77
CLASP1-215ENST00000541377 TRRAPQ9Y4A5 3859 aa4□□□□□ -1.77
CLASP1-215ENST00000541377 CUBNO60494 3623 aa3.94□□□□□ -1.78
CLASP1-215ENST00000541377 KRTAP3-1Q9BYR8 98 aa3.93□□□□□ -1.78
CLASP1-215ENST00000541377 KRTAP4-5Q9BYR2 181 aa3.93□□□□□ -1.78
CLASP1-215ENST00000541377 MT1HL1P0DM35 61 aa3.92□□□□□ -1.78
CLASP1-215ENST00000541377 CSMD2Q7Z408 3487 aa3.88□□□□□ -1.79
CLASP1-215ENST00000541377 KRTAP10-7P60409 375 aaPredicted RBP3.88□□□□□ -1.79
CLASP1-215ENST00000541377 LCE3AQ5TA76 89 aa3.86□□□□□ -1.79
CLASP1-215ENST00000541377 CSMD3Q7Z407 3707 aa3.86□□□□□ -1.79
CLASP1-215ENST00000541377 SPRR2FQ96RM1 72 aa3.83□□□□□ -1.8
CLASP1-215ENST00000541377 VPS13CQ709C8 3753 aa3.81□□□□□ -1.8
CLASP1-215ENST00000541377 SVEP1Q4LDE5 3571 aa3.77□□□□□ -1.81
CLASP1-215ENST00000541377 AKAP9Q99996 3911 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms