RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 CD164Q04900 197 aa4.79□□□□□ -1.64
YBX3-211ENST00000541351 C20orf166-AS1Q96NR2 134 aa4.79□□□□□ -1.64
YBX3-211ENST00000541351 TINCRA0A1B0GVN0 87 aa4.78□□□□□ -1.64
YBX3-211ENST00000541351 NDUFC2O95298 119 aa4.78□□□□□ -1.64
YBX3-211ENST00000541351 CLEC2BQ92478 149 aa4.78□□□□□ -1.64
YBX3-211ENST00000541351 IGLV5-45A0A087WSX0 123 aa4.77□□□□□ -1.65
YBX3-211ENST00000541351 Q5XG85 94 aa4.77□□□□□ -1.65
YBX3-211ENST00000541351 hADV29S1A0JD25 119 aa4.76□□□□□ -1.65
YBX3-211ENST00000541351 BAALC-AS2P0C853 105 aa4.76□□□□□ -1.65
YBX3-211ENST00000541351 S100A7L2Q5SY68 101 aa4.76□□□□□ -1.65
YBX3-211ENST00000541351 ATP5EP2Q5VTU8 51 aa4.76□□□□□ -1.65
YBX3-211ENST00000541351 ERC2-IT1O76042 136 aa4.75□□□□□ -1.65
YBX3-211ENST00000541351 ADAMTSL4-AS1Q5T5F5 129 aa4.75□□□□□ -1.65
YBX3-211ENST00000541351 Q75L30 129 aa4.75□□□□□ -1.65
YBX3-211ENST00000541351 DNAL4O96015 105 aa4.74□□□□□ -1.65
YBX3-211ENST00000541351 Q6ZRX8 168 aa4.74□□□□□ -1.65
YBX3-211ENST00000541351 LAMTOR3Q9UHA4 124 aa4.74□□□□□ -1.65
YBX3-211ENST00000541351 LINC00158P58513 81 aa4.73□□□□□ -1.65
YBX3-211ENST00000541351 C1orf195Q5TG92 126 aa4.73□□□□□ -1.65
YBX3-211ENST00000541351 LINC00308Q8TCZ7 52 aa4.73□□□□□ -1.65
YBX3-211ENST00000541351 OBSCN-AS1Q96MR7 158 aa4.73□□□□□ -1.65
YBX3-211ENST00000541351 PRO0628Q9UI54 55 aa4.73□□□□□ -1.65
YBX3-211ENST00000541351 TRAV13-2A0A0B4J235 113 aa4.72□□□□□ -1.65
YBX3-211ENST00000541351 H0YGX0 51 aa4.72□□□□□ -1.65
YBX3-211ENST00000541351 NPC2P61916 151 aa4.72□□□□□ -1.65
YBX3-211ENST00000541351 Q8NDZ9 215 aa4.72□□□□□ -1.65
YBX3-211ENST00000541351 SERP1Q9Y6X1 66 aa4.72□□□□□ -1.65
YBX3-211ENST00000541351 IGLV5-39A0A0G2JS06 123 aa4.71□□□□□ -1.66
YBX3-211ENST00000541351 TRBV10-3A0A0K0K1G6 114 aa4.71□□□□□ -1.66
YBX3-211ENST00000541351 SMIM29Q86T20 159 aa4.71□□□□□ -1.66
YBX3-211ENST00000541351 Q9BRP9 147 aa4.71□□□□□ -1.66
YBX3-211ENST00000541351 RBM12B-AS1Q9P1G2 102 aa4.71□□□□□ -1.66
YBX3-211ENST00000541351 NCR3O14931 201 aa4.7□□□□□ -1.66
YBX3-211ENST00000541351 ZNF625Q96I27 306 aaPredicted RBP4.7□□□□□ -1.66
YBX3-211ENST00000541351 KRTAP5-9P26371 169 aa4.69□□□□□ -1.66
YBX3-211ENST00000541351 ATP5EP56381 51 aaPredicted RBP4.69□□□□□ -1.66
YBX3-211ENST00000541351 C4orf26Q17RF5 130 aa4.69□□□□□ -1.66
YBX3-211ENST00000541351 DSCR8Q96T75 97 aa4.69□□□□□ -1.66
YBX3-211ENST00000541351 SMIM26A0A096LP01 95 aa4.67□□□□□ -1.66
YBX3-211ENST00000541351 TRAV7A0A075B6U4 112 aa4.66□□□□□ -1.66
YBX3-211ENST00000541351 IGKV3D-7A0A0C4DH55 119 aa4.66□□□□□ -1.66
YBX3-211ENST00000541351 JMJD7-PLA2G4BH0Y9G9 81 aa4.66□□□□□ -1.66
YBX3-211ENST00000541351 NDUFC1O43677 76 aa4.66□□□□□ -1.66
YBX3-211ENST00000541351 CCKP06307 115 aa4.66□□□□□ -1.66
YBX3-211ENST00000541351 SPRR1BP22528 89 aa4.66□□□□□ -1.66
YBX3-211ENST00000541351 FAM218AQ96MZ4 157 aa4.66□□□□□ -1.66
YBX3-211ENST00000541351 CYSTM1Q9H1C7 97 aa4.66□□□□□ -1.66
YBX3-211ENST00000541351 SOSTDC1Q6X4U4 206 aa4.65□□□□□ -1.67
YBX3-211ENST00000541351 KRTAP2-2Q9BYT5 123 aa4.65□□□□□ -1.67
YBX3-211ENST00000541351 KRTAP2-1Q9BYU5 128 aa4.65□□□□□ -1.67
YBX3-211ENST00000541351 KMT2DO14686 5537 aa4.64□□□□□ -1.67
YBX3-211ENST00000541351 A6NN06 94 aa4.64□□□□□ -1.67
YBX3-211ENST00000541351 A8MWP4 228 aa4.64□□□□□ -1.67
YBX3-211ENST00000541351 KLKP1Q107X0 134 aa4.64□□□□□ -1.67
YBX3-211ENST00000541351 C14orf132Q9NPU4 83 aa4.64□□□□□ -1.67
YBX3-211ENST00000541351 ORMDL1Q9P0S3 153 aa4.64□□□□□ -1.67
YBX3-211ENST00000541351 A0A0U1RRA0 63 aa4.63□□□□□ -1.67
YBX3-211ENST00000541351 ST20-AS1Q8NBB2 130 aa4.63□□□□□ -1.67
YBX3-211ENST00000541351 H3BQ85 93 aa4.62□□□□□ -1.67
YBX3-211ENST00000541351 UBL5Q9BZL1 73 aa4.62□□□□□ -1.67
YBX3-211ENST00000541351 A0A087WVE0 104 aa4.61□□□□□ -1.67
YBX3-211ENST00000541351 H7BZZ5 65 aa4.61□□□□□ -1.67
YBX3-211ENST00000541351 C20orf197Q8N268 126 aa4.61□□□□□ -1.67
YBX3-211ENST00000541351 SMIM11BQ8TCY0 68 aa4.61□□□□□ -1.67
YBX3-211ENST00000541351 DHRS4-AS1Q9P1J3 65 aa4.61□□□□□ -1.67
YBX3-211ENST00000541351 TRAV23DV6A0A075B6W5 121 aa4.6□□□□□ -1.67
YBX3-211ENST00000541351 A0A0G2JQZ4 141 aa4.6□□□□□ -1.67
YBX3-211ENST00000541351 TMEM256-PLSCR3K7ERE1 68 aa4.6□□□□□ -1.67
YBX3-211ENST00000541351 MIR7-3HGQ8N6C7 128 aa4.6□□□□□ -1.67
YBX3-211ENST00000541351 Q8N9P0 234 aaPredicted RBP4.6□□□□□ -1.67
YBX3-211ENST00000541351 ZNF73O43830 326 aaPredicted RBP4.59□□□□□ -1.67
YBX3-211ENST00000541351 PDE6GP18545 87 aa4.59□□□□□ -1.67
YBX3-211ENST00000541351 Q96NJ1 140 aa4.59□□□□□ -1.67
YBX3-211ENST00000541351 V9GYY9 64 aa4.59□□□□□ -1.67
YBX3-211ENST00000541351 MDN1Q9NU22 5596 aa4.59□□□□□ -1.68
YBX3-211ENST00000541351 LOC110117498A0A087WWA1 95 aa4.57□□□□□ -1.68
YBX3-211ENST00000541351 CXCL6P80162 114 aa4.57□□□□□ -1.68
YBX3-211ENST00000541351 SEC61GP60059 68 aa4.56□□□□□ -1.68
YBX3-211ENST00000541351 TRBV7-6A0A0J9YX20 115 aa4.55□□□□□ -1.68
YBX3-211ENST00000541351 IGFL1Q6UW32 110 aa4.55□□□□□ -1.68
YBX3-211ENST00000541351 F8WEM9 126 aa4.54□□□□□ -1.68
YBX3-211ENST00000541351 RBM3P98179 157 aaKnown RBP4.54□□□□□ -1.68
YBX3-211ENST00000541351 A8MUU9 505 aa4.53□□□□□ -1.68
YBX3-211ENST00000541351 Q6ZQT0 140 aa4.53□□□□□ -1.68
YBX3-211ENST00000541351 DEFB105AQ8NG35 78 aa4.52□□□□□ -1.69
YBX3-211ENST00000541351 MPLKIPQ8TAP9 179 aa4.52□□□□□ -1.69
YBX3-211ENST00000541351 TRBV7-4A0A0J9YYF1 115 aa4.51□□□□□ -1.69
YBX3-211ENST00000541351 SPRR2EP22531 72 aa4.51□□□□□ -1.69
YBX3-211ENST00000541351 SPRR2BP35325 72 aa4.51□□□□□ -1.69
YBX3-211ENST00000541351 SPRR2AP35326 72 aa4.51□□□□□ -1.69
YBX3-211ENST00000541351 BRK1Q8WUW1 75 aa4.51□□□□□ -1.69
YBX3-211ENST00000541351 Q6ZVQ6 151 aa4.5□□□□□ -1.69
YBX3-211ENST00000541351 LINC00575Q6W349 94 aa4.49□□□□□ -1.69
YBX3-211ENST00000541351 PRR15Q8IV56 129 aa4.49□□□□□ -1.69
YBX3-211ENST00000541351 GPR98Q8WXG9 6306 aa4.49□□□□□ -1.69
YBX3-211ENST00000541351 HRES1P13985 223 aa4.48□□□□□ -1.69
YBX3-211ENST00000541351 NREPQ16612 68 aa4.48□□□□□ -1.69
YBX3-211ENST00000541351 TMEM254Q8TBM7 123 aa4.48□□□□□ -1.69
YBX3-211ENST00000541351 SNURFQ9Y675 71 aa4.48□□□□□ -1.69
YBX3-211ENST00000541351 COX7BP24311 80 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms