RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 H3BPC8 53 aa6.17□□□□□ -1.42
CDC42SE1-207ENST00000540998 WWC2-AS2Q96NR7 200 aa6.17□□□□□ -1.42
CDC42SE1-207ENST00000540998 Q5W150 140 aa6.16□□□□□ -1.42
CDC42SE1-207ENST00000540998 A0A1B0GVX0 72 aa6.16□□□□□ -1.42
CDC42SE1-207ENST00000540998 LIMD2Q9BT23 127 aa6.16□□□□□ -1.42
CDC42SE1-207ENST00000540998 HRES1P13985 223 aa6.16□□□□□ -1.42
CDC42SE1-207ENST00000540998 PRR26Q8N8Z3 221 aa6.15□□□□□ -1.42
CDC42SE1-207ENST00000540998 SPINK7P58062 85 aa6.14□□□□□ -1.43
CDC42SE1-207ENST00000540998 ASB16-AS1Q495Z4 193 aa6.14□□□□□ -1.43
CDC42SE1-207ENST00000540998 CDK2AP2O75956 126 aa6.13□□□□□ -1.43
CDC42SE1-207ENST00000540998 CIRBP-AS1Q8TBR5 109 aa6.13□□□□□ -1.43
CDC42SE1-207ENST00000540998 MRPL34Q9BQ48 92 aaKnown RBP6.13□□□□□ -1.43
CDC42SE1-207ENST00000540998 DNAH11Q96DT5 4516 aa6.13□□□□□ -1.43
CDC42SE1-207ENST00000540998 ALMS1Q8TCU4 4167 aa6.12□□□□□ -1.43
CDC42SE1-207ENST00000540998 Q6ZR54 194 aa6.12□□□□□ -1.43
CDC42SE1-207ENST00000540998 A0A087WTM6 91 aa6.12□□□□□ -1.43
CDC42SE1-207ENST00000540998 RTL8CO15255 209 aa6.12□□□□□ -1.43
CDC42SE1-207ENST00000540998 Q75L30 129 aa6.11□□□□□ -1.43
CDC42SE1-207ENST00000540998 IGLV5-52A0A0A0MRZ9 124 aa6.1□□□□□ -1.43
CDC42SE1-207ENST00000540998 LINC00483Q53H64 154 aa6.1□□□□□ -1.43
CDC42SE1-207ENST00000540998 LOC101927531A0A1B0GV80 90 aa6.1□□□□□ -1.43
CDC42SE1-207ENST00000540998 TP53AIP1Q9HCN2 124 aa6.09□□□□□ -1.43
CDC42SE1-207ENST00000540998 ZNF861PO60384 105 aa6.07□□□□□ -1.44
CDC42SE1-207ENST00000540998 LRP1BQ9NZR2 4599 aa6.06□□□□□ -1.44
CDC42SE1-207ENST00000540998 LINC01558Q9Y6Z2 57 aa6.05□□□□□ -1.44
CDC42SE1-207ENST00000540998 DNAH5Q8TE73 4624 aa6.04□□□□□ -1.44
CDC42SE1-207ENST00000540998 PLAC8Q9NZF1 115 aa6.04□□□□□ -1.44
CDC42SE1-207ENST00000540998 A6NN06 94 aa6.03□□□□□ -1.44
CDC42SE1-207ENST00000540998 CDC42SE1Q9NRR8 79 aa6.03□□□□□ -1.44
CDC42SE1-207ENST00000540998 ZNF706Q9Y5V0 76 aaPredicted RBP6.03□□□□□ -1.44
CDC42SE1-207ENST00000540998 NUPR2A6NF83 97 aa6.02□□□□□ -1.45
CDC42SE1-207ENST00000540998 DNHD1Q96M86 4753 aa6.02□□□□□ -1.45
CDC42SE1-207ENST00000540998 KRTAP13-3Q3SY46 172 aa6.02□□□□□ -1.45
CDC42SE1-207ENST00000540998 ATP11AUNQ6ZP68 121 aa6.02□□□□□ -1.45
CDC42SE1-207ENST00000540998 KTN1-AS1Q86SY8 53 aa6.02□□□□□ -1.45
CDC42SE1-207ENST00000540998 RBM12B-AS1Q9P1G2 102 aa6□□□□□ -1.45
CDC42SE1-207ENST00000540998 IGLV7-43P04211 117 aa6□□□□□ -1.45
CDC42SE1-207ENST00000540998 FAT2Q9NYQ8 4349 aa5.99□□□□□ -1.45
CDC42SE1-207ENST00000540998 HYDINQ4G0P3 5121 aa5.98□□□□□ -1.45
CDC42SE1-207ENST00000540998 KRTAP10-2P60368 255 aa5.97□□□□□ -1.45
CDC42SE1-207ENST00000540998 PRAC1Q96KF2 57 aa5.97□□□□□ -1.45
CDC42SE1-207ENST00000540998 ADM2Q7Z4H4 148 aa5.97□□□□□ -1.45
CDC42SE1-207ENST00000540998 VPS13BQ7Z7G8 4022 aa5.96□□□□□ -1.46
CDC42SE1-207ENST00000540998 LY6G6CO95867 125 aa5.95□□□□□ -1.46
CDC42SE1-207ENST00000540998 KRTAP13-2Q52LG2 175 aa5.94□□□□□ -1.46
CDC42SE1-207ENST00000540998 IGKV2D-30A0A075B6S6 120 aa5.94□□□□□ -1.46
CDC42SE1-207ENST00000540998 IGKV2-30P06310 120 aa5.94□□□□□ -1.46
CDC42SE1-207ENST00000540998 LINC00313P59037 77 aa5.94□□□□□ -1.46
CDC42SE1-207ENST00000540998 ACYP2P14621 99 aa5.92□□□□□ -1.46
CDC42SE1-207ENST00000540998 C1orf134Q5TEV5 83 aa5.92□□□□□ -1.46
CDC42SE1-207ENST00000540998 PKD1P98161 4303 aa5.9□□□□□ -1.46
CDC42SE1-207ENST00000540998 C7orf65Q6ZTY9 151 aa5.9□□□□□ -1.47
CDC42SE1-207ENST00000540998 PKHD1P08F94 4074 aa5.9□□□□□ -1.47
CDC42SE1-207ENST00000540998 DMAC1Q96GE9 116 aa5.9□□□□□ -1.47
CDC42SE1-207ENST00000540998 SPINK1P00995 79 aa5.88□□□□□ -1.47
CDC42SE1-207ENST00000540998 A0A1B0GU69 56 aa5.88□□□□□ -1.47
CDC42SE1-207ENST00000540998 KRTAP10-1P60331 282 aa5.86□□□□□ -1.47
CDC42SE1-207ENST00000540998 KRTAP16-1A8MUX0 517 aa5.86□□□□□ -1.47
CDC42SE1-207ENST00000540998 FAM229AH3BQW9 127 aa5.85□□□□□ -1.47
CDC42SE1-207ENST00000540998 SSBP3-AS1Q7Z2R9 100 aa5.85□□□□□ -1.47
CDC42SE1-207ENST00000540998 C8orf87E5RJ46 101 aa5.85□□□□□ -1.47
CDC42SE1-207ENST00000540998 Q8N1X5 172 aa5.85□□□□□ -1.47
CDC42SE1-207ENST00000540998 KRTAP1-4P0C5Y4 121 aa5.81□□□□□ -1.48
CDC42SE1-207ENST00000540998 FAT1Q14517 4588 aa5.79□□□□□ -1.48
CDC42SE1-207ENST00000540998 MIR22HGQ0VDD5 57 aa5.79□□□□□ -1.48
CDC42SE1-207ENST00000540998 FLG2Q5D862 2391 aaPredicted RBP5.79□□□□□ -1.48
CDC42SE1-207ENST00000540998 PLA2G1BP04054 148 aaKnown RBP5.77□□□□□ -1.49
CDC42SE1-207ENST00000540998 SPATA8Q6RVD6 105 aa5.75□□□□□ -1.49
CDC42SE1-207ENST00000540998 C9orf92A6NGG3 77 aa5.74□□□□□ -1.49
CDC42SE1-207ENST00000540998 UQCR11O14957 56 aa5.74□□□□□ -1.49
CDC42SE1-207ENST00000540998 TYMSOSQ8TAI1 123 aa5.74□□□□□ -1.49
CDC42SE1-207ENST00000540998 SMR3BP02814 79 aaPredicted RBP5.72□□□□□ -1.49
CDC42SE1-207ENST00000540998 C4orf48Q5BLP8 95 aa5.72□□□□□ -1.49
CDC42SE1-207ENST00000540998 Q6ZSA8 131 aa5.71□□□□□ -1.49
CDC42SE1-207ENST00000540998 CSAG1Q6PB30 78 aa5.69□□□□□ -1.5
CDC42SE1-207ENST00000540998 DMBT1Q9UGM3 2413 aaPredicted RBP5.67□□□□□ -1.5
CDC42SE1-207ENST00000540998 DYNC1H1Q14204 4646 aaKnown RBP5.66□□□□□ -1.5
CDC42SE1-207ENST00000540998 SACSQ9NZJ4 4579 aa5.64□□□□□ -1.51
CDC42SE1-207ENST00000540998 H0YAA0 97 aa5.63□□□□□ -1.51
CDC42SE1-207ENST00000540998 LINC00304Q8N9R0 145 aa5.63□□□□□ -1.51
CDC42SE1-207ENST00000540998 LINC01554Q52M75 96 aa5.63□□□□□ -1.51
CDC42SE1-207ENST00000540998 KRTAP3-1Q9BYR8 98 aa5.63□□□□□ -1.51
CDC42SE1-207ENST00000540998 MYCBP2O75592 4640 aa5.62□□□□□ -1.51
CDC42SE1-207ENST00000540998 CRIPTQ9P021 101 aa5.61□□□□□ -1.51
CDC42SE1-207ENST00000540998 LRP1Q07954 4544 aaKnown RBP5.59□□□□□ -1.51
CDC42SE1-207ENST00000540998 APOBP04114 4563 aaKnown RBP5.55□□□□□ -1.52
CDC42SE1-207ENST00000540998 HSPG2P98160 4391 aa5.55□□□□□ -1.52
CDC42SE1-207ENST00000540998 PKHD1L1Q86WI1 4243 aa5.55□□□□□ -1.52
CDC42SE1-207ENST00000540998 A0A1B0GU33 70 aa5.52□□□□□ -1.53
CDC42SE1-207ENST00000540998 A8MUU9 505 aa5.51□□□□□ -1.53
CDC42SE1-207ENST00000540998 H1FX-AS1Q4G0G2 97 aa5.48□□□□□ -1.53
CDC42SE1-207ENST00000540998 C20orf166-AS1Q96NR2 134 aa5.48□□□□□ -1.53
CDC42SE1-207ENST00000540998 KMT2CQ8NEZ4 4911 aaKnown RBP5.48□□□□□ -1.53
CDC42SE1-207ENST00000540998 LCE2DQ5TA82 110 aaPredicted RBP5.48□□□□□ -1.53
CDC42SE1-207ENST00000540998 COX6B2Q6YFQ2 88 aa5.44□□□□□ -1.54
CDC42SE1-207ENST00000540998 KRTAP3-3Q9BYR6 98 aa5.44□□□□□ -1.54
CDC42SE1-207ENST00000540998 KRTAP3-2Q9BYR7 98 aa5.44□□□□□ -1.54
CDC42SE1-207ENST00000540998 KRTAP10-4P60372 401 aaPredicted RBP5.43□□□□□ -1.54
CDC42SE1-207ENST00000540998 FAT3Q8TDW7 4589 aa5.43□□□□□ -1.54
CDC42SE1-207ENST00000540998 A0A0D9SG42 100 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms