RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 DSCR10P59022 87 aa8.37□□□□□ -1.07
DDB1-218ENST00000540784 MUC17Q685J3 4493 aa8.37□□□□□ -1.07
DDB1-218ENST00000540784 NDUFB1O75438 58 aa8.36□□□□□ -1.07
DDB1-218ENST00000540784 A0A1B0GVX0 72 aa8.35□□□□□ -1.07
DDB1-218ENST00000540784 RPL37P61927 97 aaKnown RBP8.35□□□□□ -1.07
DDB1-218ENST00000540784 PCOTHQ58A44 107 aa8.33□□□□□ -1.08
DDB1-218ENST00000540784 A8MWP4 228 aa8.32□□□□□ -1.08
DDB1-218ENST00000540784 C8orf87E5RJ46 101 aa8.32□□□□□ -1.08
DDB1-218ENST00000540784 Q75L30 129 aa8.32□□□□□ -1.08
DDB1-218ENST00000540784 NOTCH2NLQ7Z3S9 236 aa8.32□□□□□ -1.08
DDB1-218ENST00000540784 Q6ZVQ6 151 aa8.31□□□□□ -1.08
DDB1-218ENST00000540784 BPY2O14599 106 aa8.29□□□□□ -1.08
DDB1-218ENST00000540784 ATP11AUNQ6ZP68 121 aa8.29□□□□□ -1.08
DDB1-218ENST00000540784 C20orf166-AS1Q96NR2 134 aa8.29□□□□□ -1.08
DDB1-218ENST00000540784 UBL5Q9BZL1 73 aa8.29□□□□□ -1.08
DDB1-218ENST00000540784 LINC00846Q9NV44 126 aa8.29□□□□□ -1.08
DDB1-218ENST00000540784 IGKV3D-7A0A0C4DH55 119 aa8.28□□□□□ -1.08
DDB1-218ENST00000540784 A8MUU9 505 aa8.27□□□□□ -1.09
DDB1-218ENST00000540784 KRTAP16-1A8MUX0 517 aa8.27□□□□□ -1.09
DDB1-218ENST00000540784 MUC2Q02817 5179 aa8.26□□□□□ -1.09
DDB1-218ENST00000540784 PRR15Q8IV56 129 aa8.26□□□□□ -1.09
DDB1-218ENST00000540784 KRTAP4-1Q9BYQ7 146 aa8.24□□□□□ -1.09
DDB1-218ENST00000540784 C8orf17Q9NRJ1 99 aa8.24□□□□□ -1.09
DDB1-218ENST00000540784 ACYP1P07311 99 aa8.21□□□□□ -1.1
DDB1-218ENST00000540784 K7EQZ3 153 aa8.2□□□□□ -1.1
DDB1-218ENST00000540784 A0A0U1RQV1 116 aa8.19□□□□□ -1.1
DDB1-218ENST00000540784 PCP4P48539 62 aa8.16□□□□□ -1.1
DDB1-218ENST00000540784 Q8N9L7 120 aa8.16□□□□□ -1.1
DDB1-218ENST00000540784 MMP24-AS1A0A0U1RRL7 71 aa8.15□□□□□ -1.1
DDB1-218ENST00000540784 FAM240AA0A1B0GVK7 77 aa8.15□□□□□ -1.1
DDB1-218ENST00000540784 Q8N9P0 234 aaPredicted RBP8.15□□□□□ -1.1
DDB1-218ENST00000540784 hDV103S1A0JD37 113 aa8.14□□□□□ -1.11
DDB1-218ENST00000540784 CXCL6P80162 114 aa8.13□□□□□ -1.11
DDB1-218ENST00000540784 TMEM254Q8TBM7 123 aa8.13□□□□□ -1.11
DDB1-218ENST00000540784 MRPL34Q9BQ48 92 aaKnown RBP8.13□□□□□ -1.11
DDB1-218ENST00000540784 CASC2Q6XLA1 102 aa8.09□□□□□ -1.11
DDB1-218ENST00000540784 WFDC13Q8IUB5 93 aa8.08□□□□□ -1.12
DDB1-218ENST00000540784 ZCCHC13Q8WW36 166 aaKnown RBP8.08□□□□□ -1.12
DDB1-218ENST00000540784 J3QR89 54 aa8.07□□□□□ -1.12
DDB1-218ENST00000540784 NDUFS5O43920 106 aa8.07□□□□□ -1.12
DDB1-218ENST00000540784 HCG22E2RYF7 251 aa8.05□□□□□ -1.12
DDB1-218ENST00000540784 ATP5EP2Q5VTU8 51 aa8.02□□□□□ -1.13
DDB1-218ENST00000540784 LINC00643Q86TS7 51 aa8.02□□□□□ -1.13
DDB1-218ENST00000540784 FAT4Q6V0I7 4981 aa8.02□□□□□ -1.13
DDB1-218ENST00000540784 SPINK7P58062 85 aa7.97□□□□□ -1.13
DDB1-218ENST00000540784 HIST1H4AP62805 103 aaKnown RBP7.97□□□□□ -1.13
DDB1-218ENST00000540784 KRTAP19-2Q3LHN2 52 aa7.97□□□□□ -1.13
DDB1-218ENST00000540784 LCE2CQ5TA81 110 aa7.96□□□□□ -1.14
DDB1-218ENST00000540784 COX6B2Q6YFQ2 88 aa7.96□□□□□ -1.14
DDB1-218ENST00000540784 Q5W150 140 aa7.93□□□□□ -1.14
DDB1-218ENST00000540784 LCE2AQ5TA79 106 aaPredicted RBP7.91□□□□□ -1.14
DDB1-218ENST00000540784 K7ERU9 68 aa7.9□□□□□ -1.14
DDB1-218ENST00000540784 HRES1P13985 223 aa7.9□□□□□ -1.14
DDB1-218ENST00000540784 TP53AIP1Q9HCN2 124 aa7.9□□□□□ -1.14
DDB1-218ENST00000540784 RBM12B-AS1Q9P1G2 102 aa7.9□□□□□ -1.14
DDB1-218ENST00000540784 H3BS24 57 aa7.89□□□□□ -1.15
DDB1-218ENST00000540784 A0A087WVE0 104 aa7.85□□□□□ -1.15
DDB1-218ENST00000540784 FAM236DA0A1B0GTK5 79 aa7.85□□□□□ -1.15
DDB1-218ENST00000540784 FAM236CP0DP71 79 aa7.85□□□□□ -1.15
DDB1-218ENST00000540784 MPLKIPQ8TAP9 179 aa7.85□□□□□ -1.15
DDB1-218ENST00000540784 IGKV2D-30A0A075B6S6 120 aa7.84□□□□□ -1.15
DDB1-218ENST00000540784 IGKV2-30P06310 120 aa7.84□□□□□ -1.15
DDB1-218ENST00000540784 MT1HP80294 61 aa7.84□□□□□ -1.15
DDB1-218ENST00000540784 C7orf65Q6ZTY9 151 aa7.82□□□□□ -1.16
DDB1-218ENST00000540784 M0R2T5 61 aa7.79□□□□□ -1.16
DDB1-218ENST00000540784 UQCRQO14949 82 aa7.76□□□□□ -1.17
DDB1-218ENST00000540784 IMUPQ9GZP8 106 aa7.74□□□□□ -1.17
DDB1-218ENST00000540784 TRAV22A0A0B4J277 110 aa7.73□□□□□ -1.17
DDB1-218ENST00000540784 FLGP20930 4061 aaPredicted RBP7.73□□□□□ -1.17
DDB1-218ENST00000540784 MT-ATP8P03928 68 aa7.72□□□□□ -1.17
DDB1-218ENST00000540784 SCGB1A1P11684 91 aa7.71□□□□□ -1.18
DDB1-218ENST00000540784 H0Y9P7 68 aa7.68□□□□□ -1.18
DDB1-218ENST00000540784 ATOX1O00244 68 aa7.68□□□□□ -1.18
DDB1-218ENST00000540784 C4orf26Q17RF5 130 aa7.68□□□□□ -1.18
DDB1-218ENST00000540784 OCR1Q9BZK8 76 aa7.68□□□□□ -1.18
DDB1-218ENST00000540784 CYP4F30PQ9H0H9 118 aa7.68□□□□□ -1.18
DDB1-218ENST00000540784 LOC101927531A0A1B0GV80 90 aa7.67□□□□□ -1.18
DDB1-218ENST00000540784 SEC61GP60059 68 aa7.67□□□□□ -1.18
DDB1-218ENST00000540784 KRTAP3-3Q9BYR6 98 aa7.67□□□□□ -1.18
DDB1-218ENST00000540784 KRTAP3-2Q9BYR7 98 aa7.67□□□□□ -1.18
DDB1-218ENST00000540784 H1FX-AS1Q4G0G2 97 aa7.65□□□□□ -1.18
DDB1-218ENST00000540784 KRTAP10-6P60371 365 aaPredicted RBP7.64□□□□□ -1.19
DDB1-218ENST00000540784 MP68P56378 58 aa7.63□□□□□ -1.19
DDB1-218ENST00000540784 C5orf47Q569G3 176 aa7.63□□□□□ -1.19
DDB1-218ENST00000540784 C1orf64Q8NEQ6 169 aa7.62□□□□□ -1.19
DDB1-218ENST00000540784 LORP23490 312 aaPredicted RBP7.61□□□□□ -1.19
DDB1-218ENST00000540784 LINC00208Q96KT6 92 aa7.61□□□□□ -1.19
DDB1-218ENST00000540784 FAM236AA0A1B0GUQ0 79 aa7.57□□□□□ -1.2
DDB1-218ENST00000540784 FAM236BA0A1B0GV22 79 aa7.57□□□□□ -1.2
DDB1-218ENST00000540784 SMIM20Q8N5G0 67 aa7.55□□□□□ -1.2
DDB1-218ENST00000540784 KRTAP3-1Q9BYR8 98 aa7.55□□□□□ -1.2
DDB1-218ENST00000540784 H3BPC8 53 aa7.54□□□□□ -1.2
DDB1-218ENST00000540784 A0A0A0MQY5 61 aa7.53□□□□□ -1.2
DDB1-218ENST00000540784 TRAV7A0A075B6U4 112 aa7.52□□□□□ -1.21
DDB1-218ENST00000540784 KLKP1Q107X0 134 aa7.49□□□□□ -1.21
DDB1-218ENST00000540784 KRTAP9-8Q9BYQ0 159 aa7.48□□□□□ -1.21
DDB1-218ENST00000540784 S4R3F8 94 aa7.45□□□□□ -1.22
DDB1-218ENST00000540784 LCE2DQ5TA82 110 aaPredicted RBP7.43□□□□□ -1.22
DDB1-218ENST00000540784 KRTAP9-2Q9BYQ4 174 aa7.43□□□□□ -1.22
DDB1-218ENST00000540784 MT2AP02795 61 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms