RNA–Protein interactions for RNA: ENST00000540746.6

LSM14A-202, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 2 BASIC

Gene LSM14A, Length 2,152 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-202ENST00000540746 CDK2AP2O75956 126 aa12.26□□□□□ -0.45
LSM14A-202ENST00000540746 SPINK6Q6UWN8 80 aa12.25□□□□□ -0.45
LSM14A-202ENST00000540746 SSBP3-AS1Q7Z2R9 100 aa12.23□□□□□ -0.45
LSM14A-202ENST00000540746 CD164Q04900 197 aa12.23□□□□□ -0.45
LSM14A-202ENST00000540746 VPS13BQ7Z7G8 4022 aa12.23□□□□□ -0.45
LSM14A-202ENST00000540746 MPLKIPQ8TAP9 179 aa12.22□□□□□ -0.45
LSM14A-202ENST00000540746 TP53AIP1Q9HCN2 124 aa12.22□□□□□ -0.45
LSM14A-202ENST00000540746 KRTAP21-3Q3LHN1 58 aa12.22□□□□□ -0.45
LSM14A-202ENST00000540746 KRTAP13-2Q52LG2 175 aa12.2□□□□□ -0.46
LSM14A-202ENST00000540746 MRPL34Q9BQ48 92 aaKnown RBP12.2□□□□□ -0.46
LSM14A-202ENST00000540746 NDUFS5O43920 106 aa12.19□□□□□ -0.46
LSM14A-202ENST00000540746 SPANXA2-OT1Q8N9U9 137 aa12.19□□□□□ -0.46
LSM14A-202ENST00000540746 PKHD1P08F94 4074 aa12.17□□□□□ -0.46
LSM14A-202ENST00000540746 KRTAP1-4P0C5Y4 121 aa12.12□□□□□ -0.47
LSM14A-202ENST00000540746 LINC00336Q6ZUF6 198 aa12.11□□□□□ -0.47
LSM14A-202ENST00000540746 PCOTHQ58A44 107 aa12.1□□□□□ -0.47
LSM14A-202ENST00000540746 SACSQ9NZJ4 4579 aa12.1□□□□□ -0.47
LSM14A-202ENST00000540746 IGLV7-46A0A075B6I9 117 aa12.06□□□□□ -0.48
LSM14A-202ENST00000540746 Q5W150 140 aa12.05□□□□□ -0.48
LSM14A-202ENST00000540746 C1orf195Q5TG92 126 aa12.05□□□□□ -0.48
LSM14A-202ENST00000540746 Q1T7F1 81 aa12.04□□□□□ -0.48
LSM14A-202ENST00000540746 KRTAP13-3Q3SY46 172 aa12.03□□□□□ -0.48
LSM14A-202ENST00000540746 C8orf87E5RJ46 101 aa12□□□□□ -0.49
LSM14A-202ENST00000540746 LINC00313P59037 77 aa11.97□□□□□ -0.49
LSM14A-202ENST00000540746 PLA2G1BP04054 148 aaKnown RBP11.96□□□□□ -0.49
LSM14A-202ENST00000540746 Q8N9P0 234 aaPredicted RBP11.95□□□□□ -0.5
LSM14A-202ENST00000540746 COA5Q86WW8 74 aa11.94□□□□□ -0.5
LSM14A-202ENST00000540746 LOC101927531A0A1B0GV80 90 aa11.92□□□□□ -0.5
LSM14A-202ENST00000540746 DYNC1H1Q14204 4646 aaKnown RBP11.91□□□□□ -0.5
LSM14A-202ENST00000540746 PSPHP1O15172 72 aa11.91□□□□□ -0.5
LSM14A-202ENST00000540746 TYMSOSQ8TAI1 123 aa11.89□□□□□ -0.51
LSM14A-202ENST00000540746 LIMD2Q9BT23 127 aa11.89□□□□□ -0.51
LSM14A-202ENST00000540746 PRO0628Q9UI54 55 aa11.89□□□□□ -0.51
LSM14A-202ENST00000540746 KRTAP16-1A8MUX0 517 aa11.88□□□□□ -0.51
LSM14A-202ENST00000540746 BRK1Q8WUW1 75 aa11.88□□□□□ -0.51
LSM14A-202ENST00000540746 A8MUN3 132 aa11.84□□□□□ -0.51
LSM14A-202ENST00000540746 SMR3BP02814 79 aaPredicted RBP11.84□□□□□ -0.51
LSM14A-202ENST00000540746 C4orf48Q5BLP8 95 aa11.83□□□□□ -0.52
LSM14A-202ENST00000540746 RETNLBQ9BQ08 111 aa11.83□□□□□ -0.52
LSM14A-202ENST00000540746 A0A1B0GVY2 172 aa11.82□□□□□ -0.52
LSM14A-202ENST00000540746 HRES1P13985 223 aa11.82□□□□□ -0.52
LSM14A-202ENST00000540746 PRR26Q8N8Z3 221 aa11.82□□□□□ -0.52
LSM14A-202ENST00000540746 V9GYY9 64 aa11.82□□□□□ -0.52
LSM14A-202ENST00000540746 SPINK1P00995 79 aa11.81□□□□□ -0.52
LSM14A-202ENST00000540746 FAM229AH3BQW9 127 aa11.81□□□□□ -0.52
LSM14A-202ENST00000540746 FAT1Q14517 4588 aa11.79□□□□□ -0.52
LSM14A-202ENST00000540746 APOBP04114 4563 aaKnown RBP11.78□□□□□ -0.52
LSM14A-202ENST00000540746 Q5VV11 94 aa11.76□□□□□ -0.53
LSM14A-202ENST00000540746 LINC00304Q8N9R0 145 aa11.73□□□□□ -0.53
LSM14A-202ENST00000540746 RYR2Q92736 4967 aa11.72□□□□□ -0.53
LSM14A-202ENST00000540746 IGKV2-30P06310 120 aa11.72□□□□□ -0.53
LSM14A-202ENST00000540746 KRTAP10-4P60372 401 aaPredicted RBP11.72□□□□□ -0.53
LSM14A-202ENST00000540746 KMT2CQ8NEZ4 4911 aaKnown RBP11.7□□□□□ -0.54
LSM14A-202ENST00000540746 PRR15LQ9BU68 103 aa11.7□□□□□ -0.54
LSM14A-202ENST00000540746 SPAG11AQ6PDA7 123 aa11.68□□□□□ -0.54
LSM14A-202ENST00000540746 RPS29P62273 56 aaKnown RBP11.67□□□□□ -0.54
LSM14A-202ENST00000540746 PKHD1L1Q86WI1 4243 aa11.65□□□□□ -0.54
LSM14A-202ENST00000540746 DMAC1Q96GE9 116 aa11.64□□□□□ -0.55
LSM14A-202ENST00000540746 LINC01558Q9Y6Z2 57 aa11.61□□□□□ -0.55
LSM14A-202ENST00000540746 ACYP2P14621 99 aa11.61□□□□□ -0.55
LSM14A-202ENST00000540746 CHKB-CPT1BH3BT56 60 aa11.6□□□□□ -0.55
LSM14A-202ENST00000540746 IGKV2D-30A0A075B6S6 120 aa11.6□□□□□ -0.55
LSM14A-202ENST00000540746 A8MU10 97 aa11.59□□□□□ -0.55
LSM14A-202ENST00000540746 Q75L30 129 aa11.58□□□□□ -0.56
LSM14A-202ENST00000540746 C9orf92A6NGG3 77 aa11.46□□□□□ -0.57
LSM14A-202ENST00000540746 A6NED7 52 aa11.44□□□□□ -0.58
LSM14A-202ENST00000540746 LCA10Q71F78 164 aa11.44□□□□□ -0.58
LSM14A-202ENST00000540746 FLG2Q5D862 2391 aaPredicted RBP11.43□□□□□ -0.58
LSM14A-202ENST00000540746 C7orf65Q6ZTY9 151 aa11.4□□□□□ -0.58
LSM14A-202ENST00000540746 C20orf166-AS1Q96NR2 134 aa11.39□□□□□ -0.59
LSM14A-202ENST00000540746 A8MUU9 505 aa11.38□□□□□ -0.59
LSM14A-202ENST00000540746 SPINK7P58062 85 aa11.38□□□□□ -0.59
LSM14A-202ENST00000540746 LRP1Q07954 4544 aaKnown RBP11.38□□□□□ -0.59
LSM14A-202ENST00000540746 HSPG2P98160 4391 aa11.35□□□□□ -0.59
LSM14A-202ENST00000540746 TNXBP22105 4242 aa11.33□□□□□ -0.6
LSM14A-202ENST00000540746 Q8N1X5 172 aa11.32□□□□□ -0.6
LSM14A-202ENST00000540746 RYR3Q15413 4870 aa11.32□□□□□ -0.6
LSM14A-202ENST00000540746 CDC42SE1Q9NRR8 79 aa11.31□□□□□ -0.6
LSM14A-202ENST00000540746 FAT3Q8TDW7 4589 aa11.25□□□□□ -0.61
LSM14A-202ENST00000540746 SPTSSBQ8NFR3 76 aa11.24□□□□□ -0.61
LSM14A-202ENST00000540746 Q5VSD8 79 aa11.24□□□□□ -0.61
LSM14A-202ENST00000540746 KRTAP10-8P60410 259 aa11.23□□□□□ -0.61
LSM14A-202ENST00000540746 A0A1B0GU69 56 aa11.23□□□□□ -0.61
LSM14A-202ENST00000540746 ATP11AUNQ6ZP68 121 aa11.23□□□□□ -0.61
LSM14A-202ENST00000540746 PMAIP1Q13794 54 aa11.21□□□□□ -0.62
LSM14A-202ENST00000540746 KRTAP17-1Q9BYP8 105 aa11.2□□□□□ -0.62
LSM14A-202ENST00000540746 RYR1P21817 5038 aa11.18□□□□□ -0.62
LSM14A-202ENST00000540746 DMBT1Q9UGM3 2413 aaPredicted RBP11.16□□□□□ -0.62
LSM14A-202ENST00000540746 KRTAP3-1Q9BYR8 98 aa11.16□□□□□ -0.62
LSM14A-202ENST00000540746 KIAA1109Q2LD37 5005 aa11.08□□□□□ -0.64
LSM14A-202ENST00000540746 A6NN06 94 aa11.07□□□□□ -0.64
LSM14A-202ENST00000540746 MYCBP2O75592 4640 aa11.07□□□□□ -0.64
LSM14A-202ENST00000540746 SPATA8Q6RVD6 105 aa11□□□□□ -0.65
LSM14A-202ENST00000540746 UQCR11O14957 56 aa10.99□□□□□ -0.65
LSM14A-202ENST00000540746 MT1HL1P0DM35 61 aa10.95□□□□□ -0.66
LSM14A-202ENST00000540746 MIR22HGQ0VDD5 57 aa10.95□□□□□ -0.66
LSM14A-202ENST00000540746 COX6B2Q6YFQ2 88 aa10.95□□□□□ -0.66
LSM14A-202ENST00000540746 RPL37P61927 97 aaKnown RBP10.93□□□□□ -0.66
LSM14A-202ENST00000540746 XP32Q5T750 250 aa10.93□□□□□ -0.66
LSM14A-202ENST00000540746 KTN1-AS1Q86SY8 53 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms