RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 ZNF469Q96JG9 3925 aaPredicted RBP3.75□□□□□ -1.81
PTPRD-214ENST00000540109 NIPBLQ6KC79 2804 aaeCLIP3.74□□□□□ -1.81
PTPRD-214ENST00000540109 ROMO1P60602 79 aa3.74□□□□□ -1.81
PTPRD-214ENST00000540109 Q96NJ1 140 aa3.74□□□□□ -1.81
PTPRD-214ENST00000540109 CSMD2Q7Z408 3487 aa3.74□□□□□ -1.81
PTPRD-214ENST00000540109 ZNF861PO60384 105 aa3.74□□□□□ -1.81
PTPRD-214ENST00000540109 NBDYA0A0U1RRE5 68 aa3.73□□□□□ -1.81
PTPRD-214ENST00000540109 KRTAP4-16G5E9R7 235 aaPredicted RBP3.73□□□□□ -1.81
PTPRD-214ENST00000540109 ZFHX3Q15911 3703 aa3.72□□□□□ -1.81
PTPRD-214ENST00000540109 IGLV5-52A0A0A0MRZ9 124 aa3.72□□□□□ -1.81
PTPRD-214ENST00000540109 KRTAP25-1Q3LHN0 102 aa3.72□□□□□ -1.81
PTPRD-214ENST00000540109 TENM1Q9UKZ4 2725 aa3.71□□□□□ -1.81
PTPRD-214ENST00000540109 DNAH3Q8TD57 4116 aa3.71□□□□□ -1.82
PTPRD-214ENST00000540109 ANAPC11Q9NYG5 84 aa3.71□□□□□ -1.82
PTPRD-214ENST00000540109 LINC00483Q53H64 154 aa3.71□□□□□ -1.82
PTPRD-214ENST00000540109 MAST4O15021 2626 aa3.7□□□□□ -1.82
PTPRD-214ENST00000540109 BAHCC1Q9P281 2608 aa3.7□□□□□ -1.82
PTPRD-214ENST00000540109 KRTAP21-3Q3LHN1 58 aa3.69□□□□□ -1.82
PTPRD-214ENST00000540109 RPL37P61927 97 aaKnown RBP3.69□□□□□ -1.82
PTPRD-214ENST00000540109 VWFP04275 2813 aa3.68□□□□□ -1.82
PTPRD-214ENST00000540109 CASC10Q5T4H9 136 aa3.68□□□□□ -1.82
PTPRD-214ENST00000540109 KRTAP1-5Q9BYS1 174 aa3.66□□□□□ -1.82
PTPRD-214ENST00000540109 NBEAL2Q6ZNJ1 2754 aa3.66□□□□□ -1.82
PTPRD-214ENST00000540109 FLNBO75369 2602 aaKnown RBP3.66□□□□□ -1.82
PTPRD-214ENST00000540109 Q6ZRN7 208 aaPredicted RBP3.66□□□□□ -1.82
PTPRD-214ENST00000540109 STAB1Q9NY15 2570 aa3.65□□□□□ -1.83
PTPRD-214ENST00000540109 KRTAP7-1Q8IUC3 87 aa3.65□□□□□ -1.83
PTPRD-214ENST00000540109 TYMSOSQ8TAI1 123 aa3.64□□□□□ -1.83
PTPRD-214ENST00000540109 A0A087WTM6 91 aa3.64□□□□□ -1.83
PTPRD-214ENST00000540109 LINC00304Q8N9R0 145 aa3.63□□□□□ -1.83
PTPRD-214ENST00000540109 H1FX-AS1Q4G0G2 97 aa3.63□□□□□ -1.83
PTPRD-214ENST00000540109 ANK2Q01484 3957 aa3.62□□□□□ -1.83
PTPRD-214ENST00000540109 Q5W150 140 aa3.62□□□□□ -1.83
PTPRD-214ENST00000540109 A8MUU9 505 aa3.62□□□□□ -1.83
PTPRD-214ENST00000540109 C20orf166-AS1Q96NR2 134 aa3.62□□□□□ -1.83
PTPRD-214ENST00000540109 PLAC8Q9NZF1 115 aa3.62□□□□□ -1.83
PTPRD-214ENST00000540109 COL6A5A8TX70 2615 aa3.61□□□□□ -1.83
PTPRD-214ENST00000540109 CMYA5Q8N3K9 4069 aa3.61□□□□□ -1.83
PTPRD-214ENST00000540109 KRTAP13-1Q8IUC0 172 aa3.6□□□□□ -1.83
PTPRD-214ENST00000540109 CUBNO60494 3623 aa3.6□□□□□ -1.83
PTPRD-214ENST00000540109 C9orf92A6NGG3 77 aa3.6□□□□□ -1.83
PTPRD-214ENST00000540109 TENM3Q9P273 2699 aa3.6□□□□□ -1.83
PTPRD-214ENST00000540109 WWC2-AS2Q96NR7 200 aa3.6□□□□□ -1.83
PTPRD-214ENST00000540109 DYNC2H1Q8NCM8 4307 aaKnown RBP3.6□□□□□ -1.83
PTPRD-214ENST00000540109 HUWE1Q7Z6Z7 4374 aaKnown RBP3.59□□□□□ -1.83
PTPRD-214ENST00000540109 PSORS1C2Q9UIG4 136 aa3.58□□□□□ -1.84
PTPRD-214ENST00000540109 MGAM2Q2M2H8 2515 aa3.57□□□□□ -1.84
PTPRD-214ENST00000540109 RPS29P62273 56 aaKnown RBP3.57□□□□□ -1.84
PTPRD-214ENST00000540109 NOTCH1P46531 2555 aa3.57□□□□□ -1.84
PTPRD-214ENST00000540109 FBN1P35555 2871 aaKnown RBP3.57□□□□□ -1.84
PTPRD-214ENST00000540109 PANO1I0J062 215 aa3.57□□□□□ -1.84
PTPRD-214ENST00000540109 DMBT1Q9UGM3 2413 aaPredicted RBP3.55□□□□□ -1.84
PTPRD-214ENST00000540109 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.55□□□□□ -1.84
PTPRD-214ENST00000540109 DNAH1Q9P2D7 4330 aa3.55□□□□□ -1.84
PTPRD-214ENST00000540109 NBEAL1Q6ZS30 2694 aa3.55□□□□□ -1.84
PTPRD-214ENST00000540109 TRRAPQ9Y4A5 3859 aa3.55□□□□□ -1.84
PTPRD-214ENST00000540109 PP632Q6XCG6 107 aa3.54□□□□□ -1.84
PTPRD-214ENST00000540109 DNAH9Q9NYC9 4486 aa3.54□□□□□ -1.84
PTPRD-214ENST00000540109 M0R2T5 61 aa3.54□□□□□ -1.84
PTPRD-214ENST00000540109 STAB2Q8WWQ8 2551 aa3.53□□□□□ -1.84
PTPRD-214ENST00000540109 PKD1L1Q8TDX9 2849 aa3.53□□□□□ -1.84
PTPRD-214ENST00000540109 M0QZ58 72 aa3.52□□□□□ -1.85
PTPRD-214ENST00000540109 KRTAP11-1Q8IUC1 163 aa3.51□□□□□ -1.85
PTPRD-214ENST00000540109 C10orf95Q9H7T3 257 aa3.5□□□□□ -1.85
PTPRD-214ENST00000540109 Q6ZSA8 131 aa3.49□□□□□ -1.85
PTPRD-214ENST00000540109 DNAH6Q9C0G6 4158 aa3.49□□□□□ -1.85
PTPRD-214ENST00000540109 VPS13DQ5THJ4 4388 aa3.48□□□□□ -1.85
PTPRD-214ENST00000540109 ALMS1Q8TCU4 4167 aa3.48□□□□□ -1.85
PTPRD-214ENST00000540109 S4R3F8 94 aa3.45□□□□□ -1.86
PTPRD-214ENST00000540109 PLAC4Q8WY50 150 aa3.45□□□□□ -1.86
PTPRD-214ENST00000540109 DNAH7Q8WXX0 4024 aa3.43□□□□□ -1.86
PTPRD-214ENST00000540109 DNAH17Q9UFH2 4485 aa3.42□□□□□ -1.86
PTPRD-214ENST00000540109 DNAH10Q8IVF4 4471 aa3.42□□□□□ -1.86
PTPRD-214ENST00000540109 KRTAP10-2P60368 255 aa3.42□□□□□ -1.86
PTPRD-214ENST00000540109 PLECQ15149 4684 aaKnown RBP3.41□□□□□ -1.86
PTPRD-214ENST00000540109 KRTAP10-1P60331 282 aa3.41□□□□□ -1.86
PTPRD-214ENST00000540109 P0C880 135 aa3.4□□□□□ -1.87
PTPRD-214ENST00000540109 Q5VSD8 79 aa3.39□□□□□ -1.87
PTPRD-214ENST00000540109 R4GN34 69 aa3.38□□□□□ -1.87
PTPRD-214ENST00000540109 PRKDCP78527 4128 aaKnown RBP3.37□□□□□ -1.87
PTPRD-214ENST00000540109 H0YAA0 97 aa3.37□□□□□ -1.87
PTPRD-214ENST00000540109 COL7A1Q02388 2944 aa3.36□□□□□ -1.87
PTPRD-214ENST00000540109 DNAH8Q96JB1 4490 aa3.36□□□□□ -1.87
PTPRD-214ENST00000540109 DNAH2Q9P225 4427 aa3.36□□□□□ -1.87
PTPRD-214ENST00000540109 KRTAP1-4P0C5Y4 121 aa3.35□□□□□ -1.87
PTPRD-214ENST00000540109 KRTAP13-2Q52LG2 175 aa3.35□□□□□ -1.87
PTPRD-214ENST00000540109 MEGF8Q7Z7M0 2845 aa3.35□□□□□ -1.87
PTPRD-214ENST00000540109 STARD9Q9P2P6 4700 aa3.35□□□□□ -1.87
PTPRD-214ENST00000540109 A0A1B0GVY2 172 aa3.33□□□□□ -1.88
PTPRD-214ENST00000540109 SMR3BP02814 79 aaPredicted RBP3.32□□□□□ -1.88
PTPRD-214ENST00000540109 KRTAP13-3Q3SY46 172 aa3.31□□□□□ -1.88
PTPRD-214ENST00000540109 TENM2Q9NT68 2774 aa3.31□□□□□ -1.88
PTPRD-214ENST00000540109 FBN3Q75N90 2809 aa3.31□□□□□ -1.88
PTPRD-214ENST00000540109 CSMD3Q7Z407 3707 aa3.3□□□□□ -1.88
PTPRD-214ENST00000540109 HECTD4Q9Y4D8 3996 aa3.3□□□□□ -1.88
PTPRD-214ENST00000540109 DNAH11Q96DT5 4516 aa3.29□□□□□ -1.88
PTPRD-214ENST00000540109 TNP1P09430 55 aa3.28□□□□□ -1.88
PTPRD-214ENST00000540109 KRTAP10-8P60410 259 aa3.25□□□□□ -1.89
PTPRD-214ENST00000540109 DNAH5Q8TE73 4624 aa3.24□□□□□ -1.89
PTPRD-214ENST00000540109 INE1O15225 51 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 174.8 ms