RNA–Protein interactions for RNA: ENST00000539589.5

PACSIN3-211, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PACSIN3, Length 2,009 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-211ENST00000539589 FAM229BQ4G0N7 80 aa11.86□□□□□ -0.51
PACSIN3-211ENST00000539589 A0A1B0GVX0 72 aa11.86□□□□□ -0.51
PACSIN3-211ENST00000539589 ZCCHC13Q8WW36 166 aaKnown RBP11.86□□□□□ -0.51
PACSIN3-211ENST00000539589 C8orf17Q9NRJ1 99 aa11.84□□□□□ -0.51
PACSIN3-211ENST00000539589 A0A087X002 238 aa11.84□□□□□ -0.51
PACSIN3-211ENST00000539589 IGHV6-1A0A0B4J1U7 121 aa11.83□□□□□ -0.52
PACSIN3-211ENST00000539589 SERP1Q9Y6X1 66 aa11.83□□□□□ -0.52
PACSIN3-211ENST00000539589 ASB16-AS1Q495Z4 193 aa11.82□□□□□ -0.52
PACSIN3-211ENST00000539589 KIAA1109Q2LD37 5005 aa11.81□□□□□ -0.52
PACSIN3-211ENST00000539589 KRTAP13-2Q52LG2 175 aa11.81□□□□□ -0.52
PACSIN3-211ENST00000539589 OXTP01178 125 aa11.8□□□□□ -0.52
PACSIN3-211ENST00000539589 SPINK6Q6UWN8 80 aa11.79□□□□□ -0.52
PACSIN3-211ENST00000539589 H0Y9P7 68 aa11.78□□□□□ -0.52
PACSIN3-211ENST00000539589 H3BPC8 53 aa11.77□□□□□ -0.52
PACSIN3-211ENST00000539589 LINC00208Q96KT6 92 aa11.76□□□□□ -0.53
PACSIN3-211ENST00000539589 TP53AIP1Q9HCN2 124 aa11.76□□□□□ -0.53
PACSIN3-211ENST00000539589 PLA2G1BP04054 148 aaKnown RBP11.72□□□□□ -0.53
PACSIN3-211ENST00000539589 KRTAP17-1Q9BYP8 105 aa11.72□□□□□ -0.53
PACSIN3-211ENST00000539589 TRAV22A0A0B4J277 110 aa11.72□□□□□ -0.53
PACSIN3-211ENST00000539589 Q5XG85 94 aa11.72□□□□□ -0.53
PACSIN3-211ENST00000539589 MRPL34Q9BQ48 92 aaKnown RBP11.72□□□□□ -0.53
PACSIN3-211ENST00000539589 NOTCH2NLQ7Z3S9 236 aa11.7□□□□□ -0.54
PACSIN3-211ENST00000539589 NDUFS5O43920 106 aa11.68□□□□□ -0.54
PACSIN3-211ENST00000539589 C1orf64Q8NEQ6 169 aa11.68□□□□□ -0.54
PACSIN3-211ENST00000539589 FAM229AH3BQW9 127 aa11.65□□□□□ -0.54
PACSIN3-211ENST00000539589 LRP1Q07954 4544 aaKnown RBP11.65□□□□□ -0.54
PACSIN3-211ENST00000539589 LIMD2Q9BT23 127 aa11.65□□□□□ -0.54
PACSIN3-211ENST00000539589 C8orf87E5RJ46 101 aa11.64□□□□□ -0.55
PACSIN3-211ENST00000539589 TYMSOSQ8TAI1 123 aa11.64□□□□□ -0.55
PACSIN3-211ENST00000539589 C1orf195Q5TG92 126 aa11.64□□□□□ -0.55
PACSIN3-211ENST00000539589 Q5VSD8 79 aa11.64□□□□□ -0.55
PACSIN3-211ENST00000539589 PRR26Q8N8Z3 221 aa11.64□□□□□ -0.55
PACSIN3-211ENST00000539589 C4orf48Q5BLP8 95 aa11.63□□□□□ -0.55
PACSIN3-211ENST00000539589 FAT3Q8TDW7 4589 aa11.61□□□□□ -0.55
PACSIN3-211ENST00000539589 TNXBP22105 4242 aa11.59□□□□□ -0.55
PACSIN3-211ENST00000539589 SMIM26A0A096LP01 95 aa11.59□□□□□ -0.55
PACSIN3-211ENST00000539589 CYP4F30PQ9H0H9 118 aa11.58□□□□□ -0.56
PACSIN3-211ENST00000539589 SPINK1P00995 79 aa11.57□□□□□ -0.56
PACSIN3-211ENST00000539589 SPANXA2-OT1Q8N9U9 137 aa11.57□□□□□ -0.56
PACSIN3-211ENST00000539589 LINC00313P59037 77 aa11.56□□□□□ -0.56
PACSIN3-211ENST00000539589 PRR4Q16378 134 aa11.54□□□□□ -0.56
PACSIN3-211ENST00000539589 Q8N1X5 172 aa11.49□□□□□ -0.57
PACSIN3-211ENST00000539589 FP248Q71RG6 208 aaPredicted RBP11.48□□□□□ -0.57
PACSIN3-211ENST00000539589 LINC00304Q8N9R0 145 aa11.48□□□□□ -0.57
PACSIN3-211ENST00000539589 SPAG11AQ6PDA7 123 aa11.47□□□□□ -0.57
PACSIN3-211ENST00000539589 RPS29P62273 56 aaKnown RBP11.47□□□□□ -0.57
PACSIN3-211ENST00000539589 MYCBP2O75592 4640 aa11.46□□□□□ -0.57
PACSIN3-211ENST00000539589 SVIPQ8NHG7 77 aa11.46□□□□□ -0.57
PACSIN3-211ENST00000539589 FLG2Q5D862 2391 aaPredicted RBP11.46□□□□□ -0.58
PACSIN3-211ENST00000539589 C4orf26Q17RF5 130 aa11.45□□□□□ -0.58
PACSIN3-211ENST00000539589 PCOTHQ58A44 107 aa11.45□□□□□ -0.58
PACSIN3-211ENST00000539589 Q5W150 140 aa11.45□□□□□ -0.58
PACSIN3-211ENST00000539589 Q8N9P0 234 aaPredicted RBP11.45□□□□□ -0.58
PACSIN3-211ENST00000539589 BIRC6Q9NR09 4857 aa11.44□□□□□ -0.58
PACSIN3-211ENST00000539589 IGLV7-46A0A075B6I9 117 aa11.43□□□□□ -0.58
PACSIN3-211ENST00000539589 LOC101927531A0A1B0GV80 90 aa11.43□□□□□ -0.58
PACSIN3-211ENST00000539589 KRTAP13-3Q3SY46 172 aa11.43□□□□□ -0.58
PACSIN3-211ENST00000539589 KRTAP16-1A8MUX0 517 aa11.39□□□□□ -0.59
PACSIN3-211ENST00000539589 KRTAP10-8P60410 259 aa11.37□□□□□ -0.59
PACSIN3-211ENST00000539589 KRTAP4-5Q9BYR2 181 aa11.35□□□□□ -0.59
PACSIN3-211ENST00000539589 MPLKIPQ8TAP9 179 aa11.34□□□□□ -0.59
PACSIN3-211ENST00000539589 HERC2O95714 4834 aa11.33□□□□□ -0.6
PACSIN3-211ENST00000539589 RETNLBQ9BQ08 111 aa11.28□□□□□ -0.6
PACSIN3-211ENST00000539589 ABCA13Q86UQ4 5058 aa11.28□□□□□ -0.6
PACSIN3-211ENST00000539589 COA5Q86WW8 74 aa11.26□□□□□ -0.61
PACSIN3-211ENST00000539589 Q1T7F1 81 aa11.25□□□□□ -0.61
PACSIN3-211ENST00000539589 MT1HL1P0DM35 61 aa11.25□□□□□ -0.61
PACSIN3-211ENST00000539589 DMBT1Q9UGM3 2413 aaPredicted RBP11.24□□□□□ -0.61
PACSIN3-211ENST00000539589 IGKV2-30P06310 120 aa11.23□□□□□ -0.61
PACSIN3-211ENST00000539589 V9GYY9 64 aa11.18□□□□□ -0.62
PACSIN3-211ENST00000539589 HRES1P13985 223 aa11.16□□□□□ -0.62
PACSIN3-211ENST00000539589 IGKV2D-30A0A075B6S6 120 aa11.12□□□□□ -0.63
PACSIN3-211ENST00000539589 ACYP2P14621 99 aa11.09□□□□□ -0.63
PACSIN3-211ENST00000539589 C9orf92A6NGG3 77 aa11.09□□□□□ -0.63
PACSIN3-211ENST00000539589 DMAC1Q96GE9 116 aa11.08□□□□□ -0.64
PACSIN3-211ENST00000539589 PSPHP1O15172 72 aa11.06□□□□□ -0.64
PACSIN3-211ENST00000539589 C20orf166-AS1Q96NR2 134 aa11.05□□□□□ -0.64
PACSIN3-211ENST00000539589 A8MUU9 505 aa11.04□□□□□ -0.64
PACSIN3-211ENST00000539589 C7orf65Q6ZTY9 151 aa11.01□□□□□ -0.65
PACSIN3-211ENST00000539589 A8MUN3 132 aa11.01□□□□□ -0.65
PACSIN3-211ENST00000539589 BRK1Q8WUW1 75 aa10.96□□□□□ -0.66
PACSIN3-211ENST00000539589 PRR15LQ9BU68 103 aa10.96□□□□□ -0.66
PACSIN3-211ENST00000539589 CHKB-CPT1BH3BT56 60 aa10.95□□□□□ -0.66
PACSIN3-211ENST00000539589 Q5VV11 94 aa10.93□□□□□ -0.66
PACSIN3-211ENST00000539589 PRO0628Q9UI54 55 aa10.92□□□□□ -0.66
PACSIN3-211ENST00000539589 LINC01558Q9Y6Z2 57 aa10.92□□□□□ -0.66
PACSIN3-211ENST00000539589 Q75L30 129 aa10.89□□□□□ -0.67
PACSIN3-211ENST00000539589 LPAP08519 4548 aa10.83□□□□□ -0.68
PACSIN3-211ENST00000539589 PCLOQ9Y6V0 5065 aa10.83□□□□□ -0.68
PACSIN3-211ENST00000539589 J3QL48 77 aa10.82□□□□□ -0.68
PACSIN3-211ENST00000539589 SPINK7P58062 85 aa10.79□□□□□ -0.68
PACSIN3-211ENST00000539589 LRP2P98164 4655 aa10.76□□□□□ -0.69
PACSIN3-211ENST00000539589 XP32Q5T750 250 aa10.74□□□□□ -0.69
PACSIN3-211ENST00000539589 ATP11AUNQ6ZP68 121 aa10.73□□□□□ -0.69
PACSIN3-211ENST00000539589 A6NED7 52 aa10.72□□□□□ -0.69
PACSIN3-211ENST00000539589 RPL37P61927 97 aaKnown RBP10.68□□□□□ -0.7
PACSIN3-211ENST00000539589 HERC1Q15751 4861 aa10.68□□□□□ -0.7
PACSIN3-211ENST00000539589 TPRXLQ17RH7 258 aa10.68□□□□□ -0.7
PACSIN3-211ENST00000539589 A0A1B0GU69 56 aa10.64□□□□□ -0.71
PACSIN3-211ENST00000539589 KRTAP3-1Q9BYR8 98 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms