RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 DEFB105AQ8NG35 78 aa5.42□□□□□ -1.54
DDB1-213ENST00000539332 DSCR10P59022 87 aa5.41□□□□□ -1.54
DDB1-213ENST00000539332 TRAV22A0A0B4J277 110 aa5.4□□□□□ -1.54
DDB1-213ENST00000539332 SPRR1BP22528 89 aa5.4□□□□□ -1.54
DDB1-213ENST00000539332 LIMD2Q9BT23 127 aa5.39□□□□□ -1.55
DDB1-213ENST00000539332 PSORS1C2Q9UIG4 136 aa5.39□□□□□ -1.55
DDB1-213ENST00000539332 UBE2AP49459 152 aa5.39□□□□□ -1.55
DDB1-213ENST00000539332 K7EQZ3 153 aa5.38□□□□□ -1.55
DDB1-213ENST00000539332 APOBP04114 4563 aaKnown RBP5.37□□□□□ -1.55
DDB1-213ENST00000539332 IGLV8-61A0A075B6I0 122 aa5.37□□□□□ -1.55
DDB1-213ENST00000539332 VPS13BQ7Z7G8 4022 aa5.36□□□□□ -1.55
DDB1-213ENST00000539332 EPPK1P58107 5090 aaKnown RBP5.36□□□□□ -1.55
DDB1-213ENST00000539332 PSPHP1O15172 72 aa5.35□□□□□ -1.55
DDB1-213ENST00000539332 ZNF861PO60384 105 aa5.34□□□□□ -1.55
DDB1-213ENST00000539332 LINC00483Q53H64 154 aa5.34□□□□□ -1.55
DDB1-213ENST00000539332 NOTCH2NLQ7Z3S9 236 aa5.34□□□□□ -1.55
DDB1-213ENST00000539332 LINC00208Q96KT6 92 aa5.34□□□□□ -1.56
DDB1-213ENST00000539332 SMR3BP02814 79 aaPredicted RBP5.33□□□□□ -1.56
DDB1-213ENST00000539332 IGLV7-43P04211 117 aa5.33□□□□□ -1.56
DDB1-213ENST00000539332 A8MUN3 132 aa5.32□□□□□ -1.56
DDB1-213ENST00000539332 Q5VV11 94 aa5.32□□□□□ -1.56
DDB1-213ENST00000539332 ZNF706Q9Y5V0 76 aaPredicted RBP5.32□□□□□ -1.56
DDB1-213ENST00000539332 HSPG2P98160 4391 aa5.31□□□□□ -1.56
DDB1-213ENST00000539332 KRTAP29-1A8MX34 341 aaPredicted RBP5.3□□□□□ -1.56
DDB1-213ENST00000539332 H0Y9P7 68 aa5.3□□□□□ -1.56
DDB1-213ENST00000539332 RPL37AP61513 92 aaKnown RBP5.3□□□□□ -1.56
DDB1-213ENST00000539332 LCE2DQ5TA82 110 aaPredicted RBP5.3□□□□□ -1.56
DDB1-213ENST00000539332 IGFL1Q6UW32 110 aa5.3□□□□□ -1.56
DDB1-213ENST00000539332 ATP11AUNQ6ZP68 121 aa5.3□□□□□ -1.56
DDB1-213ENST00000539332 Q8N9P0 234 aaPredicted RBP5.3□□□□□ -1.56
DDB1-213ENST00000539332 FAT1Q14517 4588 aa5.3□□□□□ -1.56
DDB1-213ENST00000539332 CHKB-CPT1BH3BT56 60 aa5.29□□□□□ -1.56
DDB1-213ENST00000539332 CASC2Q6XLA1 102 aa5.29□□□□□ -1.56
DDB1-213ENST00000539332 KIAA1109Q2LD37 5005 aa5.29□□□□□ -1.56
DDB1-213ENST00000539332 IGHV6-1A0A0B4J1U7 121 aa5.29□□□□□ -1.56
DDB1-213ENST00000539332 KTN1-AS1Q86SY8 53 aa5.29□□□□□ -1.56
DDB1-213ENST00000539332 WFDC13Q8IUB5 93 aa5.29□□□□□ -1.56
DDB1-213ENST00000539332 LOC101927531A0A1B0GV80 90 aa5.28□□□□□ -1.56
DDB1-213ENST00000539332 PRR4Q16378 134 aa5.28□□□□□ -1.56
DDB1-213ENST00000539332 KRTAP23-1A1A580 65 aa5.27□□□□□ -1.57
DDB1-213ENST00000539332 A8MWP4 228 aa5.27□□□□□ -1.57
DDB1-213ENST00000539332 LINC00313P59037 77 aa5.27□□□□□ -1.57
DDB1-213ENST00000539332 KRTAP10-4P60372 401 aaPredicted RBP5.27□□□□□ -1.57
DDB1-213ENST00000539332 A0A087WSZ3 146 aa5.27□□□□□ -1.57
DDB1-213ENST00000539332 PRR15LQ9BU68 103 aa5.27□□□□□ -1.57
DDB1-213ENST00000539332 RYR1P21817 5038 aa5.26□□□□□ -1.57
DDB1-213ENST00000539332 IGLV7-46A0A075B6I9 117 aa5.25□□□□□ -1.57
DDB1-213ENST00000539332 TP53AIP1Q9HCN2 124 aa5.25□□□□□ -1.57
DDB1-213ENST00000539332 A0A0G2JQZ4 141 aa5.24□□□□□ -1.57
DDB1-213ENST00000539332 Q5VSD8 79 aa5.24□□□□□ -1.57
DDB1-213ENST00000539332 KRTAP17-1Q9BYP8 105 aa5.24□□□□□ -1.57
DDB1-213ENST00000539332 CDC42SE1Q9NRR8 79 aa5.24□□□□□ -1.57
DDB1-213ENST00000539332 A6NED7 52 aa5.23□□□□□ -1.57
DDB1-213ENST00000539332 SPINK6Q6UWN8 80 aa5.23□□□□□ -1.57
DDB1-213ENST00000539332 COA5Q86WW8 74 aa5.23□□□□□ -1.57
DDB1-213ENST00000539332 FLG2Q5D862 2391 aaPredicted RBP5.22□□□□□ -1.57
DDB1-213ENST00000539332 KRTAP1-4P0C5Y4 121 aa5.21□□□□□ -1.57
DDB1-213ENST00000539332 Q8N1X5 172 aa5.21□□□□□ -1.57
DDB1-213ENST00000539332 LINC00472Q9H8W2 130 aa5.21□□□□□ -1.57
DDB1-213ENST00000539332 ANAPC11Q9NYG5 84 aa5.21□□□□□ -1.57
DDB1-213ENST00000539332 LINC01558Q9Y6Z2 57 aa5.21□□□□□ -1.57
DDB1-213ENST00000539332 MOBPQ13875 183 aa5.21□□□□□ -1.58
DDB1-213ENST00000539332 DEFB116Q30KQ4 102 aa5.2□□□□□ -1.58
DDB1-213ENST00000539332 LCA10Q71F78 164 aa5.2□□□□□ -1.58
DDB1-213ENST00000539332 PKHD1L1Q86WI1 4243 aa5.19□□□□□ -1.58
DDB1-213ENST00000539332 A6NN06 94 aa5.19□□□□□ -1.58
DDB1-213ENST00000539332 SSBP3-AS1Q7Z2R9 100 aa5.19□□□□□ -1.58
DDB1-213ENST00000539332 SPTSSBQ8NFR3 76 aa5.19□□□□□ -1.58
DDB1-213ENST00000539332 A0A087X002 238 aa5.18□□□□□ -1.58
DDB1-213ENST00000539332 MMP24-AS1A0A0U1RRL7 71 aa5.18□□□□□ -1.58
DDB1-213ENST00000539332 KRTAP13-2Q52LG2 175 aa5.18□□□□□ -1.58
DDB1-213ENST00000539332 C7orf65Q6ZTY9 151 aa5.18□□□□□ -1.58
DDB1-213ENST00000539332 BIRC6Q9NR09 4857 aa5.18□□□□□ -1.58
DDB1-213ENST00000539332 ASB16-AS1Q495Z4 193 aa5.16□□□□□ -1.58
DDB1-213ENST00000539332 Q96NJ1 140 aa5.14□□□□□ -1.59
DDB1-213ENST00000539332 A8MU10 97 aa5.14□□□□□ -1.59
DDB1-213ENST00000539332 KRTAP4-5Q9BYR2 181 aa5.14□□□□□ -1.59
DDB1-213ENST00000539332 PRAC1Q96KF2 57 aa5.13□□□□□ -1.59
DDB1-213ENST00000539332 MYCBP2O75592 4640 aa5.12□□□□□ -1.59
DDB1-213ENST00000539332 LRP1Q07954 4544 aaKnown RBP5.11□□□□□ -1.59
DDB1-213ENST00000539332 C8orf17Q9NRJ1 99 aa5.11□□□□□ -1.59
DDB1-213ENST00000539332 HERC2O95714 4834 aa5.1□□□□□ -1.59
DDB1-213ENST00000539332 SPAG11AQ6PDA7 123 aa5.1□□□□□ -1.59
DDB1-213ENST00000539332 DMBT1Q9UGM3 2413 aaPredicted RBP5.09□□□□□ -1.59
DDB1-213ENST00000539332 PCOTHQ58A44 107 aa5.09□□□□□ -1.59
DDB1-213ENST00000539332 TYMSOSQ8TAI1 123 aa5.09□□□□□ -1.59
DDB1-213ENST00000539332 A0A1B0GVX0 72 aa5.09□□□□□ -1.6
DDB1-213ENST00000539332 HRES1P13985 223 aa5.08□□□□□ -1.6
DDB1-213ENST00000539332 MRPL34Q9BQ48 92 aaKnown RBP5.07□□□□□ -1.6
DDB1-213ENST00000539332 RPS29P62273 56 aaKnown RBP5.06□□□□□ -1.6
DDB1-213ENST00000539332 ABCA13Q86UQ4 5058 aa5.05□□□□□ -1.6
DDB1-213ENST00000539332 KRTAP10-8P60410 259 aa5.05□□□□□ -1.6
DDB1-213ENST00000539332 LINC01554Q52M75 96 aa5.05□□□□□ -1.6
DDB1-213ENST00000539332 FAT3Q8TDW7 4589 aa5.05□□□□□ -1.6
DDB1-213ENST00000539332 TNXBP22105 4242 aa5.05□□□□□ -1.6
DDB1-213ENST00000539332 SPINK1P00995 79 aa5.04□□□□□ -1.6
DDB1-213ENST00000539332 SPINK7P58062 85 aa5.04□□□□□ -1.6
DDB1-213ENST00000539332 ACYP2P14621 99 aa5.04□□□□□ -1.6
DDB1-213ENST00000539332 LINC00304Q8N9R0 145 aa5.04□□□□□ -1.6
DDB1-213ENST00000539332 MT1HL1P0DM35 61 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms